Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability

The actinobacteria Streptomyces wadayamensis A23, an endophitic strain, was recently sequenced and previous work showed qualitatively that the strain inhibits the growth of some pathogens. Herein we report the genome analysis of S. wadayamensis which reveals several antibiotic biosynthetic pathways. Using mass spectrometry, we were able to identify desferoxamines, several antimycins and candicidin, as predicted. Additionally, it was possible to confirm that the biosynthetic machinery of the strain when compared to identified known metabolites is far underestimated. As suggested by biochemical qualitative tests, genome encoded information reveals that the strain A23 has high capability to produce antibiotics.

Saved in:
Bibliographic Details
Main Authors: Angolini,Célio F. F., Gonçalves,Ana B., Sigrist,Renata, Paulo,Bruno S., Samborskyy,Markiyan, Cruz,Pedro L. R., Vivian,Adriana F., Schmidt,Eduardo M., Eberlin,Marcos N., Araújo,Welington L., Oliveira,Luciana G. de
Format: Digital revista
Language:English
Published: Sociedade Brasileira de Química 2016
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532016000801465
Tags: Add Tag
No Tags, Be the first to tag this record!
id oai:scielo:S0103-50532016000801465
record_format ojs
spelling oai:scielo:S0103-505320160008014652016-08-19Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production CapabilityAngolini,Célio F. F.Gonçalves,Ana B.Sigrist,RenataPaulo,Bruno S.Samborskyy,MarkiyanCruz,Pedro L. R.Vivian,Adriana F.Schmidt,Eduardo M.Eberlin,Marcos N.Araújo,Welington L.Oliveira,Luciana G. de genome sequencing genome mining molecular networking Streptomyces antibiotic activity The actinobacteria Streptomyces wadayamensis A23, an endophitic strain, was recently sequenced and previous work showed qualitatively that the strain inhibits the growth of some pathogens. Herein we report the genome analysis of S. wadayamensis which reveals several antibiotic biosynthetic pathways. Using mass spectrometry, we were able to identify desferoxamines, several antimycins and candicidin, as predicted. Additionally, it was possible to confirm that the biosynthetic machinery of the strain when compared to identified known metabolites is far underestimated. As suggested by biochemical qualitative tests, genome encoded information reveals that the strain A23 has high capability to produce antibiotics.info:eu-repo/semantics/openAccessSociedade Brasileira de QuímicaJournal of the Brazilian Chemical Society v.27 n.8 20162016-08-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532016000801465en10.5935/0103-5053.20160180
institution SCIELO
collection OJS
country Brasil
countrycode BR
component Revista
access En linea
databasecode rev-scielo-br
tag revista
region America del Sur
libraryname SciELO
language English
format Digital
author Angolini,Célio F. F.
Gonçalves,Ana B.
Sigrist,Renata
Paulo,Bruno S.
Samborskyy,Markiyan
Cruz,Pedro L. R.
Vivian,Adriana F.
Schmidt,Eduardo M.
Eberlin,Marcos N.
Araújo,Welington L.
Oliveira,Luciana G. de
spellingShingle Angolini,Célio F. F.
Gonçalves,Ana B.
Sigrist,Renata
Paulo,Bruno S.
Samborskyy,Markiyan
Cruz,Pedro L. R.
Vivian,Adriana F.
Schmidt,Eduardo M.
Eberlin,Marcos N.
Araújo,Welington L.
Oliveira,Luciana G. de
Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability
author_facet Angolini,Célio F. F.
Gonçalves,Ana B.
Sigrist,Renata
Paulo,Bruno S.
Samborskyy,Markiyan
Cruz,Pedro L. R.
Vivian,Adriana F.
Schmidt,Eduardo M.
Eberlin,Marcos N.
Araújo,Welington L.
Oliveira,Luciana G. de
author_sort Angolini,Célio F. F.
title Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability
title_short Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability
title_full Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability
title_fullStr Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability
title_full_unstemmed Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability
title_sort genome mining of endophytic streptomyces wadayamensis reveals high antibiotic production capability
description The actinobacteria Streptomyces wadayamensis A23, an endophitic strain, was recently sequenced and previous work showed qualitatively that the strain inhibits the growth of some pathogens. Herein we report the genome analysis of S. wadayamensis which reveals several antibiotic biosynthetic pathways. Using mass spectrometry, we were able to identify desferoxamines, several antimycins and candicidin, as predicted. Additionally, it was possible to confirm that the biosynthetic machinery of the strain when compared to identified known metabolites is far underestimated. As suggested by biochemical qualitative tests, genome encoded information reveals that the strain A23 has high capability to produce antibiotics.
publisher Sociedade Brasileira de Química
publishDate 2016
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532016000801465
work_keys_str_mv AT angolinicelioff genomeminingofendophyticstreptomyceswadayamensisrevealshighantibioticproductioncapability
AT goncalvesanab genomeminingofendophyticstreptomyceswadayamensisrevealshighantibioticproductioncapability
AT sigristrenata genomeminingofendophyticstreptomyceswadayamensisrevealshighantibioticproductioncapability
AT paulobrunos genomeminingofendophyticstreptomyceswadayamensisrevealshighantibioticproductioncapability
AT samborskyymarkiyan genomeminingofendophyticstreptomyceswadayamensisrevealshighantibioticproductioncapability
AT cruzpedrolr genomeminingofendophyticstreptomyceswadayamensisrevealshighantibioticproductioncapability
AT vivianadrianaf genomeminingofendophyticstreptomyceswadayamensisrevealshighantibioticproductioncapability
AT schmidteduardom genomeminingofendophyticstreptomyceswadayamensisrevealshighantibioticproductioncapability
AT eberlinmarcosn genomeminingofendophyticstreptomyceswadayamensisrevealshighantibioticproductioncapability
AT araujowelingtonl genomeminingofendophyticstreptomyceswadayamensisrevealshighantibioticproductioncapability
AT oliveiralucianagde genomeminingofendophyticstreptomyceswadayamensisrevealshighantibioticproductioncapability
_version_ 1756403656135016448