A study of neolignan compounds with biological activity against Paracoccidioides brasiliensis by using quantum chemical and chemometric methods

Chemometric (statistical) methods are employed to classify a set of neolignan compounds with activity against Paracoccidioides brasiliensis. The AM1 (Austin Model 1) method was used to calculate a set of molecular descriptors (properties) of the neolignan compounds under study. The descriptors were further analyzed using Principal Components Analysis (PCA), Hierarchical Cluster Analysis (HCA) and K-Nearest Neighbor (KNN) chemometric methods. The PCA and HCA methods were quite efficient to classify the compounds into two groups (active and inactive) and three descriptors were found to be important in the classification: the highest occupied molecular orbital energy (E HOMO), the bond order between C1'-R7 atoms (L14) and the bond order between C5' -R6 atoms (L22). The three variables responsible for the separation between active and inactive compounds are all electronic descriptors, therefore we can conclude that electronic effects should have an important role when one is trying to understand the activity of neolignan compounds against Paracoccidioides brasiliensis.

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Main Authors: Camargo,Ademir J., Honório,Káthia M., Mercadante,Ricardo, Molfetta,Fábio A., Alves,Cláudio N., Silva,Albérico B. F. da
Format: Digital revista
Language:English
Published: Sociedade Brasileira de Química 2003
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532003000500017
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spelling oai:scielo:S0103-505320030005000172004-02-04A study of neolignan compounds with biological activity against Paracoccidioides brasiliensis by using quantum chemical and chemometric methodsCamargo,Ademir J.Honório,Káthia M.Mercadante,RicardoMolfetta,Fábio A.Alves,Cláudio N.Silva,Albérico B. F. da neolignans Paracoccidioides brasiliensis AM1 PCA HCA KNN Chemometric (statistical) methods are employed to classify a set of neolignan compounds with activity against Paracoccidioides brasiliensis. The AM1 (Austin Model 1) method was used to calculate a set of molecular descriptors (properties) of the neolignan compounds under study. The descriptors were further analyzed using Principal Components Analysis (PCA), Hierarchical Cluster Analysis (HCA) and K-Nearest Neighbor (KNN) chemometric methods. The PCA and HCA methods were quite efficient to classify the compounds into two groups (active and inactive) and three descriptors were found to be important in the classification: the highest occupied molecular orbital energy (E HOMO), the bond order between C1'-R7 atoms (L14) and the bond order between C5' -R6 atoms (L22). The three variables responsible for the separation between active and inactive compounds are all electronic descriptors, therefore we can conclude that electronic effects should have an important role when one is trying to understand the activity of neolignan compounds against Paracoccidioides brasiliensis.info:eu-repo/semantics/openAccessSociedade Brasileira de QuímicaJournal of the Brazilian Chemical Society v.14 n.5 20032003-10-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532003000500017en10.1590/S0103-50532003000500017
institution SCIELO
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country Brasil
countrycode BR
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databasecode rev-scielo-br
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libraryname SciELO
language English
format Digital
author Camargo,Ademir J.
Honório,Káthia M.
Mercadante,Ricardo
Molfetta,Fábio A.
Alves,Cláudio N.
Silva,Albérico B. F. da
spellingShingle Camargo,Ademir J.
Honório,Káthia M.
Mercadante,Ricardo
Molfetta,Fábio A.
Alves,Cláudio N.
Silva,Albérico B. F. da
A study of neolignan compounds with biological activity against Paracoccidioides brasiliensis by using quantum chemical and chemometric methods
author_facet Camargo,Ademir J.
Honório,Káthia M.
Mercadante,Ricardo
Molfetta,Fábio A.
Alves,Cláudio N.
Silva,Albérico B. F. da
author_sort Camargo,Ademir J.
title A study of neolignan compounds with biological activity against Paracoccidioides brasiliensis by using quantum chemical and chemometric methods
title_short A study of neolignan compounds with biological activity against Paracoccidioides brasiliensis by using quantum chemical and chemometric methods
title_full A study of neolignan compounds with biological activity against Paracoccidioides brasiliensis by using quantum chemical and chemometric methods
title_fullStr A study of neolignan compounds with biological activity against Paracoccidioides brasiliensis by using quantum chemical and chemometric methods
title_full_unstemmed A study of neolignan compounds with biological activity against Paracoccidioides brasiliensis by using quantum chemical and chemometric methods
title_sort study of neolignan compounds with biological activity against paracoccidioides brasiliensis by using quantum chemical and chemometric methods
description Chemometric (statistical) methods are employed to classify a set of neolignan compounds with activity against Paracoccidioides brasiliensis. The AM1 (Austin Model 1) method was used to calculate a set of molecular descriptors (properties) of the neolignan compounds under study. The descriptors were further analyzed using Principal Components Analysis (PCA), Hierarchical Cluster Analysis (HCA) and K-Nearest Neighbor (KNN) chemometric methods. The PCA and HCA methods were quite efficient to classify the compounds into two groups (active and inactive) and three descriptors were found to be important in the classification: the highest occupied molecular orbital energy (E HOMO), the bond order between C1'-R7 atoms (L14) and the bond order between C5' -R6 atoms (L22). The three variables responsible for the separation between active and inactive compounds are all electronic descriptors, therefore we can conclude that electronic effects should have an important role when one is trying to understand the activity of neolignan compounds against Paracoccidioides brasiliensis.
publisher Sociedade Brasileira de Química
publishDate 2003
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532003000500017
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