Self-organizing maps and VolSurf approach to predict aldose reductase inhibition by flavonoid compounds

Aldose Reductase (AR) is the polyol pathway key enzyme which converts glucose to sorbitol. High glucose availability in insulin resistant tissues in diabetes leads into an accumulation of sorbitol, which has been associated with typical chronic complications of this disease, such as neuropathy, nephropathy and retinopathy. In this study, 71 flavonoids AR inhibitors were subjected to two methods of SAR to verify crucial substituents. The first method used the PCA (Principal Component Analysis) to elucidate physical and chemical characteristics in the molecules that would be essential for the activity, employing VolSurf descriptors. The rate obtained explained 53% of the system total variance and revealed that a hydrophobic-hydrophilic balance in the molecules is required, since very polar or nonpolar substituents decrease the activity. Artificial Neural Networks (ANNs) was also employed to determine key substituents by evaluating substitution patterns, using NMR data. This study had a high success rate (85% accuracy in the training set and 88% accuracy in the test set) and showed polihydroxilations are essential for high activity and methoxylations and glicosilations primarily at positions C7, C3' and C4' decrease the activity.

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Main Authors: Scotti,Luciana, Fernandes,Mariane B., Muramatsu,Eric, Pasqualoto,Kerly F. M., Emereciano,Vicente de P., Tavares,Leoberto C., Silva,Marcelo Sobral da, Scotti,Marcus T.
Format: Digital revista
Language:English
Published: Sociedade Brasileira de Farmacognosia 2011
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0102-695X2011000100027
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spelling oai:scielo:S0102-695X20110001000272011-03-28Self-organizing maps and VolSurf approach to predict aldose reductase inhibition by flavonoid compoundsScotti,LucianaFernandes,Mariane B.Muramatsu,EricPasqualoto,Kerly F. M.Emereciano,Vicente de P.Tavares,Leoberto C.Silva,Marcelo Sobral daScotti,Marcus T. flavonoids 13C NMR aldose reductase Artificial Neural Networks VolSurf Aldose Reductase (AR) is the polyol pathway key enzyme which converts glucose to sorbitol. High glucose availability in insulin resistant tissues in diabetes leads into an accumulation of sorbitol, which has been associated with typical chronic complications of this disease, such as neuropathy, nephropathy and retinopathy. In this study, 71 flavonoids AR inhibitors were subjected to two methods of SAR to verify crucial substituents. The first method used the PCA (Principal Component Analysis) to elucidate physical and chemical characteristics in the molecules that would be essential for the activity, employing VolSurf descriptors. The rate obtained explained 53% of the system total variance and revealed that a hydrophobic-hydrophilic balance in the molecules is required, since very polar or nonpolar substituents decrease the activity. Artificial Neural Networks (ANNs) was also employed to determine key substituents by evaluating substitution patterns, using NMR data. This study had a high success rate (85% accuracy in the training set and 88% accuracy in the test set) and showed polihydroxilations are essential for high activity and methoxylations and glicosilations primarily at positions C7, C3' and C4' decrease the activity.info:eu-repo/semantics/openAccessSociedade Brasileira de FarmacognosiaRevista Brasileira de Farmacognosia v.21 n.1 20112011-02-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0102-695X2011000100027en10.1590/S0102-695X2011005000028
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language English
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author Scotti,Luciana
Fernandes,Mariane B.
Muramatsu,Eric
Pasqualoto,Kerly F. M.
Emereciano,Vicente de P.
Tavares,Leoberto C.
Silva,Marcelo Sobral da
Scotti,Marcus T.
spellingShingle Scotti,Luciana
Fernandes,Mariane B.
Muramatsu,Eric
Pasqualoto,Kerly F. M.
Emereciano,Vicente de P.
Tavares,Leoberto C.
Silva,Marcelo Sobral da
Scotti,Marcus T.
Self-organizing maps and VolSurf approach to predict aldose reductase inhibition by flavonoid compounds
author_facet Scotti,Luciana
Fernandes,Mariane B.
Muramatsu,Eric
Pasqualoto,Kerly F. M.
Emereciano,Vicente de P.
Tavares,Leoberto C.
Silva,Marcelo Sobral da
Scotti,Marcus T.
author_sort Scotti,Luciana
title Self-organizing maps and VolSurf approach to predict aldose reductase inhibition by flavonoid compounds
title_short Self-organizing maps and VolSurf approach to predict aldose reductase inhibition by flavonoid compounds
title_full Self-organizing maps and VolSurf approach to predict aldose reductase inhibition by flavonoid compounds
title_fullStr Self-organizing maps and VolSurf approach to predict aldose reductase inhibition by flavonoid compounds
title_full_unstemmed Self-organizing maps and VolSurf approach to predict aldose reductase inhibition by flavonoid compounds
title_sort self-organizing maps and volsurf approach to predict aldose reductase inhibition by flavonoid compounds
description Aldose Reductase (AR) is the polyol pathway key enzyme which converts glucose to sorbitol. High glucose availability in insulin resistant tissues in diabetes leads into an accumulation of sorbitol, which has been associated with typical chronic complications of this disease, such as neuropathy, nephropathy and retinopathy. In this study, 71 flavonoids AR inhibitors were subjected to two methods of SAR to verify crucial substituents. The first method used the PCA (Principal Component Analysis) to elucidate physical and chemical characteristics in the molecules that would be essential for the activity, employing VolSurf descriptors. The rate obtained explained 53% of the system total variance and revealed that a hydrophobic-hydrophilic balance in the molecules is required, since very polar or nonpolar substituents decrease the activity. Artificial Neural Networks (ANNs) was also employed to determine key substituents by evaluating substitution patterns, using NMR data. This study had a high success rate (85% accuracy in the training set and 88% accuracy in the test set) and showed polihydroxilations are essential for high activity and methoxylations and glicosilations primarily at positions C7, C3' and C4' decrease the activity.
publisher Sociedade Brasileira de Farmacognosia
publishDate 2011
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0102-695X2011000100027
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