Molecular docking study of naturallyoccurring compounds as inhibitors of N-myristoyl transferase towards antifungal agents discovery

Fungal infections currently remain as a common problem in public health. Actually, drug discovery programs are oriented to the searching for lead structures. Virtual screening and molecular docking constitute great alternatives in order to find hit compounds. Novel infection targets can also be defined and employed together with molecular docking tools in drug discovery programs. Thus, thirty-two natural compounds were docked within the active site of N-myristoyl transferase (NMT) as antifungal enzyme target. From tested compounds, alkaloids, flavonoids, xanthones, and quinones exhibited strongest mean interaction with NMT than terpenoids, coumarins and phenolics. Particularly, affinities for one aporphine alkaloid, a prenylated flavonoid and two xanthones resulted to be comparable with that of previously reported synthetic inhibitor. Several hydrophobic and polar contacts were demonstrated by comparing different computational tools. The present results let to establish three possible lead structures to develop antifungal drugs although subsequent SAR analyses are still required.

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Main Authors: Guerrero-Perilla,Camilo, Bernal,Freddy A., Coy-Barrera,Ericsson D.
Format: Digital revista
Language:English
Published: Departamento de Farmácia, Facultad de Ciencias, Universidade Nacional da Colombia 2015
Online Access:http://www.scielo.org.co/scielo.php?script=sci_arttext&pid=S0034-74182015000200003
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spelling oai:scielo:S0034-741820150002000032016-05-06Molecular docking study of naturallyoccurring compounds as inhibitors of N-myristoyl transferase towards antifungal agents discoveryGuerrero-Perilla,CamiloBernal,Freddy A.Coy-Barrera,Ericsson D. Molecular docking natural products antifungal N-myristoyl transferase Fungal infections currently remain as a common problem in public health. Actually, drug discovery programs are oriented to the searching for lead structures. Virtual screening and molecular docking constitute great alternatives in order to find hit compounds. Novel infection targets can also be defined and employed together with molecular docking tools in drug discovery programs. Thus, thirty-two natural compounds were docked within the active site of N-myristoyl transferase (NMT) as antifungal enzyme target. From tested compounds, alkaloids, flavonoids, xanthones, and quinones exhibited strongest mean interaction with NMT than terpenoids, coumarins and phenolics. Particularly, affinities for one aporphine alkaloid, a prenylated flavonoid and two xanthones resulted to be comparable with that of previously reported synthetic inhibitor. Several hydrophobic and polar contacts were demonstrated by comparing different computational tools. The present results let to establish three possible lead structures to develop antifungal drugs although subsequent SAR analyses are still required.info:eu-repo/semantics/openAccessDepartamento de Farmácia, Facultad de Ciencias, Universidade Nacional da ColombiaRevista Colombiana de Ciencias Químico - Farmacéuticas v.44 n.2 20152015-05-01info:eu-repo/semantics/articletext/htmlhttp://www.scielo.org.co/scielo.php?script=sci_arttext&pid=S0034-74182015000200003en10.15446/rcciquifa.v44n2.56291
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country Colombia
countrycode CO
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region America del Sur
libraryname SciELO
language English
format Digital
author Guerrero-Perilla,Camilo
Bernal,Freddy A.
Coy-Barrera,Ericsson D.
spellingShingle Guerrero-Perilla,Camilo
Bernal,Freddy A.
Coy-Barrera,Ericsson D.
Molecular docking study of naturallyoccurring compounds as inhibitors of N-myristoyl transferase towards antifungal agents discovery
author_facet Guerrero-Perilla,Camilo
Bernal,Freddy A.
Coy-Barrera,Ericsson D.
author_sort Guerrero-Perilla,Camilo
title Molecular docking study of naturallyoccurring compounds as inhibitors of N-myristoyl transferase towards antifungal agents discovery
title_short Molecular docking study of naturallyoccurring compounds as inhibitors of N-myristoyl transferase towards antifungal agents discovery
title_full Molecular docking study of naturallyoccurring compounds as inhibitors of N-myristoyl transferase towards antifungal agents discovery
title_fullStr Molecular docking study of naturallyoccurring compounds as inhibitors of N-myristoyl transferase towards antifungal agents discovery
title_full_unstemmed Molecular docking study of naturallyoccurring compounds as inhibitors of N-myristoyl transferase towards antifungal agents discovery
title_sort molecular docking study of naturallyoccurring compounds as inhibitors of n-myristoyl transferase towards antifungal agents discovery
description Fungal infections currently remain as a common problem in public health. Actually, drug discovery programs are oriented to the searching for lead structures. Virtual screening and molecular docking constitute great alternatives in order to find hit compounds. Novel infection targets can also be defined and employed together with molecular docking tools in drug discovery programs. Thus, thirty-two natural compounds were docked within the active site of N-myristoyl transferase (NMT) as antifungal enzyme target. From tested compounds, alkaloids, flavonoids, xanthones, and quinones exhibited strongest mean interaction with NMT than terpenoids, coumarins and phenolics. Particularly, affinities for one aporphine alkaloid, a prenylated flavonoid and two xanthones resulted to be comparable with that of previously reported synthetic inhibitor. Several hydrophobic and polar contacts were demonstrated by comparing different computational tools. The present results let to establish three possible lead structures to develop antifungal drugs although subsequent SAR analyses are still required.
publisher Departamento de Farmácia, Facultad de Ciencias, Universidade Nacional da Colombia
publishDate 2015
url http://www.scielo.org.co/scielo.php?script=sci_arttext&pid=S0034-74182015000200003
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