Evidence of genetic diversity within Solanum Lycopersicum L. ‘Platense’ landrace and identification of various subpopulations

Local varieties and landraces are traditional crops that have evolved over time through adaptation to their natural and cultural environment. They are presently regarded as a valuable genetic reservoir, given that most of the genetic diversity of domesticated species lies in these and other traditionally used varieties. The 'Platense' tomato landrace is adapted to the local soil and climate of the La Plata horticultural green belt, as a result of the gradual selection of a number of tomato cultivars that were introduced in Argentina towards the end of the nineteenth century following the massive immigration flow, mainly from Europe. In the present study we have evaluated the genetic identity and diversity of this landrace and all its subpopulations registered at the Germplasm Bank of the “La Consulta” Agricultural Experimental Station of INTA. The molecular analysis, based on 14 polymorphic microsatellite markers, presented a mean number of alleles per locus of 2.56 with an average polymorphic information content of 0.28. The genetic information obtained allowed the assessment of the genetic variation between and within entries, as well as the identification of all revealed genotypes with an exclusion power of over 99.99%. Likewise, the diversity was evaluated for the whole landrace, as well as for every subpopulation, establishing notably high diversity values both for the complete landrace and a number of its subpopulations. This information is highly useful in the description of the 'Platense' landrace variability and constitutes a solid approach for the genetic characterization of the available material at Germplasm Bank accessions, as well as for other eventual members of this landrace presently in use by local horticulturists.

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Main Authors: Cattáneo, Raúl Amado, McCarthy, Andrés Norman, Feingold, Sergio Enrique
Format: info:ar-repo/semantics/artículo biblioteca
Language:eng
Published: Springer Nature 2020-06-14
Subjects:Solanum Lycopersicum, Tomate, Marcadores Genéticos, Variación Genética, Germosplasma, Tomatoes, Genetic Markers, Genetic Variation, Germplasm,
Online Access:http://hdl.handle.net/20.500.12123/7488
https://link.springer.com/article/10.1007/s10722-020-00959-8
https://doi.org/10.1007/s10722-020-00959-8
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spelling oai:localhost:20.500.12123-74882020-06-30T11:35:05Z Evidence of genetic diversity within Solanum Lycopersicum L. ‘Platense’ landrace and identification of various subpopulations Cattáneo, Raúl Amado McCarthy, Andrés Norman Feingold, Sergio Enrique Solanum Lycopersicum Tomate Marcadores Genéticos Variación Genética Germosplasma Tomatoes Genetic Markers Genetic Variation Germplasm Local varieties and landraces are traditional crops that have evolved over time through adaptation to their natural and cultural environment. They are presently regarded as a valuable genetic reservoir, given that most of the genetic diversity of domesticated species lies in these and other traditionally used varieties. The 'Platense' tomato landrace is adapted to the local soil and climate of the La Plata horticultural green belt, as a result of the gradual selection of a number of tomato cultivars that were introduced in Argentina towards the end of the nineteenth century following the massive immigration flow, mainly from Europe. In the present study we have evaluated the genetic identity and diversity of this landrace and all its subpopulations registered at the Germplasm Bank of the “La Consulta” Agricultural Experimental Station of INTA. The molecular analysis, based on 14 polymorphic microsatellite markers, presented a mean number of alleles per locus of 2.56 with an average polymorphic information content of 0.28. The genetic information obtained allowed the assessment of the genetic variation between and within entries, as well as the identification of all revealed genotypes with an exclusion power of over 99.99%. Likewise, the diversity was evaluated for the whole landrace, as well as for every subpopulation, establishing notably high diversity values both for the complete landrace and a number of its subpopulations. This information is highly useful in the description of the 'Platense' landrace variability and constitutes a solid approach for the genetic characterization of the available material at Germplasm Bank accessions, as well as for other eventual members of this landrace presently in use by local horticulturists. EEA Balcarce Fil: Cattáneo, Raúl Amado. Universidad Nacional de La Plata. Facultad de Ciencias Exactas; Argentina Fil: McCarthy, Andrés Norman. Universidad Nacional de La Plata. Facultad de Ciencias Exa Fil: Feingold, Sergio Enrique. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Balcarce; Argentina. 2020-06-30T11:23:11Z 2020-06-30T11:23:11Z 2020-06-14 info:ar-repo/semantics/artículo info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://hdl.handle.net/20.500.12123/7488 https://link.springer.com/article/10.1007/s10722-020-00959-8 0925-9864 1573-5109 https://doi.org/10.1007/s10722-020-00959-8 eng info:eu-repo/semantics/restrictedAccess application/pdf Springer Nature Genetic Resources and Crop Evolution (2020)
institution INTA AR
collection DSpace
country Argentina
countrycode AR
component Bibliográfico
access En linea
databasecode dig-inta-ar
tag biblioteca
region America del Sur
libraryname Biblioteca Central del INTA Argentina
language eng
topic Solanum Lycopersicum
Tomate
Marcadores Genéticos
Variación Genética
Germosplasma
Tomatoes
Genetic Markers
Genetic Variation
Germplasm
Solanum Lycopersicum
Tomate
Marcadores Genéticos
Variación Genética
Germosplasma
Tomatoes
Genetic Markers
Genetic Variation
Germplasm
spellingShingle Solanum Lycopersicum
Tomate
Marcadores Genéticos
Variación Genética
Germosplasma
Tomatoes
Genetic Markers
Genetic Variation
Germplasm
Solanum Lycopersicum
Tomate
Marcadores Genéticos
Variación Genética
Germosplasma
Tomatoes
Genetic Markers
Genetic Variation
Germplasm
Cattáneo, Raúl Amado
McCarthy, Andrés Norman
Feingold, Sergio Enrique
Evidence of genetic diversity within Solanum Lycopersicum L. ‘Platense’ landrace and identification of various subpopulations
description Local varieties and landraces are traditional crops that have evolved over time through adaptation to their natural and cultural environment. They are presently regarded as a valuable genetic reservoir, given that most of the genetic diversity of domesticated species lies in these and other traditionally used varieties. The 'Platense' tomato landrace is adapted to the local soil and climate of the La Plata horticultural green belt, as a result of the gradual selection of a number of tomato cultivars that were introduced in Argentina towards the end of the nineteenth century following the massive immigration flow, mainly from Europe. In the present study we have evaluated the genetic identity and diversity of this landrace and all its subpopulations registered at the Germplasm Bank of the “La Consulta” Agricultural Experimental Station of INTA. The molecular analysis, based on 14 polymorphic microsatellite markers, presented a mean number of alleles per locus of 2.56 with an average polymorphic information content of 0.28. The genetic information obtained allowed the assessment of the genetic variation between and within entries, as well as the identification of all revealed genotypes with an exclusion power of over 99.99%. Likewise, the diversity was evaluated for the whole landrace, as well as for every subpopulation, establishing notably high diversity values both for the complete landrace and a number of its subpopulations. This information is highly useful in the description of the 'Platense' landrace variability and constitutes a solid approach for the genetic characterization of the available material at Germplasm Bank accessions, as well as for other eventual members of this landrace presently in use by local horticulturists.
format info:ar-repo/semantics/artículo
topic_facet Solanum Lycopersicum
Tomate
Marcadores Genéticos
Variación Genética
Germosplasma
Tomatoes
Genetic Markers
Genetic Variation
Germplasm
author Cattáneo, Raúl Amado
McCarthy, Andrés Norman
Feingold, Sergio Enrique
author_facet Cattáneo, Raúl Amado
McCarthy, Andrés Norman
Feingold, Sergio Enrique
author_sort Cattáneo, Raúl Amado
title Evidence of genetic diversity within Solanum Lycopersicum L. ‘Platense’ landrace and identification of various subpopulations
title_short Evidence of genetic diversity within Solanum Lycopersicum L. ‘Platense’ landrace and identification of various subpopulations
title_full Evidence of genetic diversity within Solanum Lycopersicum L. ‘Platense’ landrace and identification of various subpopulations
title_fullStr Evidence of genetic diversity within Solanum Lycopersicum L. ‘Platense’ landrace and identification of various subpopulations
title_full_unstemmed Evidence of genetic diversity within Solanum Lycopersicum L. ‘Platense’ landrace and identification of various subpopulations
title_sort evidence of genetic diversity within solanum lycopersicum l. ‘platense’ landrace and identification of various subpopulations
publisher Springer Nature
publishDate 2020-06-14
url http://hdl.handle.net/20.500.12123/7488
https://link.springer.com/article/10.1007/s10722-020-00959-8
https://doi.org/10.1007/s10722-020-00959-8
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