Complete genome sequence and integrated protein localization and interaction map for alfalfa dwarf virus, which combines properties of both cytoplasmic and nuclear plant rhabdoviruses

We have determined the full-length 14,491-nucleotide genome sequence of a new plant rhabdovirus, alfalfa dwarf virus (ADV). Seven open reading frames (ORFs) were identified in the antigenomic orientation of the negative-sense, single-stranded viral RNA, in the order 3′-N-P-P3-M-G-P6-L-5′. The ORFs are separated by conserved intergenic regions and the genome coding region is flanked by complementary 3′ leader and 5′ trailer sequences. Phylogenetic analysis of the nucleoprotein amino acid sequence indicated that this alfalfa-infecting rhabdovirus is related to viruses in the genus Cytorhabdovirus. When transiently expressed as GFP fusions in Nicotiana benthamiana leaves, most ADV proteins accumulated in the cell periphery, but unexpectedly P protein was localized exclusively in the nucleus. ADV P protein was shown to have a homotypic, and heterotypic nuclear interactions with N, P3 and M proteins by bimolecular fluorescence complementation. ADV appears unique in that it combines properties of both cytoplasmic and nuclear plant rhabdoviruses.

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Main Authors: Bejerman, Nicolas Esteban, Giolitti, Fabian, De Breuil, Soledad, Trucco, Veronica Milagros, Nome Docampo, Claudia, Lenardon, Sergio Luis, Dietzgen, Ralf Georg
Format: info:ar-repo/semantics/artículo biblioteca
Language:eng
Published: Elsevier 2015-09
Subjects:Medicago Sativa, Genomas, Cytorhabdovirus, Nucleorhabdovirus, Proteínas, Fosfoproteínas, Genomes, Proteins, Phosphoproteins, Alfalfa, Rabdovirus,
Online Access:http://hdl.handle.net/20.500.12123/3803
https://www.sciencedirect.com/science/article/pii/S0042682215002457?via%3Dihub
https://doi.org/10.1016/j.virol.2015.05.001
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spelling oai:localhost:20.500.12123-38032018-11-06T18:08:39Z Complete genome sequence and integrated protein localization and interaction map for alfalfa dwarf virus, which combines properties of both cytoplasmic and nuclear plant rhabdoviruses Bejerman, Nicolas Esteban Giolitti, Fabian De Breuil, Soledad Trucco, Veronica Milagros Nome Docampo, Claudia Lenardon, Sergio Luis Dietzgen, Ralf Georg Medicago Sativa Genomas Cytorhabdovirus Nucleorhabdovirus Proteínas Fosfoproteínas Genomes Proteins Phosphoproteins Alfalfa Rabdovirus We have determined the full-length 14,491-nucleotide genome sequence of a new plant rhabdovirus, alfalfa dwarf virus (ADV). Seven open reading frames (ORFs) were identified in the antigenomic orientation of the negative-sense, single-stranded viral RNA, in the order 3′-N-P-P3-M-G-P6-L-5′. The ORFs are separated by conserved intergenic regions and the genome coding region is flanked by complementary 3′ leader and 5′ trailer sequences. Phylogenetic analysis of the nucleoprotein amino acid sequence indicated that this alfalfa-infecting rhabdovirus is related to viruses in the genus Cytorhabdovirus. When transiently expressed as GFP fusions in Nicotiana benthamiana leaves, most ADV proteins accumulated in the cell periphery, but unexpectedly P protein was localized exclusively in the nucleus. ADV P protein was shown to have a homotypic, and heterotypic nuclear interactions with N, P3 and M proteins by bimolecular fluorescence complementation. ADV appears unique in that it combines properties of both cytoplasmic and nuclear plant rhabdoviruses. Instituto de Patología Vegetal Fil: Bejerman, Nicolas Esteban. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina. University of Queensland. Queensland Alliance for Agriculture and Food Innovation; Australia Fil: Giolitti, Fabian. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina Fil: De Breuil, Soledad. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Trucco, Veronica Milagros: Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina Fil: Nome Docampo, Claudia. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina Fil: Lenardon, Sergio Luis. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina Fil: Dietzgen, Ralf Georg. University of Queensland. Queensland Alliance for Agriculture and Food Innovation; Australia 2018-11-06T18:04:21Z 2018-11-06T18:04:21Z 2015-09 info:ar-repo/semantics/artículo info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://hdl.handle.net/20.500.12123/3803 https://www.sciencedirect.com/science/article/pii/S0042682215002457?via%3Dihub 0042-6822 https://doi.org/10.1016/j.virol.2015.05.001 eng info:eu-repo/semantics/restrictedAccess application/pdf Elsevier Virology 483 : 275-283. (September 2015)
institution INTA AR
collection DSpace
country Argentina
countrycode AR
component Bibliográfico
access En linea
databasecode dig-inta-ar
tag biblioteca
region America del Sur
libraryname Biblioteca Central del INTA Argentina
language eng
topic Medicago Sativa
Genomas
Cytorhabdovirus
Nucleorhabdovirus
Proteínas
Fosfoproteínas
Genomes
Proteins
Phosphoproteins
Alfalfa
Rabdovirus
Medicago Sativa
Genomas
Cytorhabdovirus
Nucleorhabdovirus
Proteínas
Fosfoproteínas
Genomes
Proteins
Phosphoproteins
Alfalfa
Rabdovirus
spellingShingle Medicago Sativa
Genomas
Cytorhabdovirus
Nucleorhabdovirus
Proteínas
Fosfoproteínas
Genomes
Proteins
Phosphoproteins
Alfalfa
Rabdovirus
Medicago Sativa
Genomas
Cytorhabdovirus
Nucleorhabdovirus
Proteínas
Fosfoproteínas
Genomes
Proteins
Phosphoproteins
Alfalfa
Rabdovirus
Bejerman, Nicolas Esteban
Giolitti, Fabian
De Breuil, Soledad
Trucco, Veronica Milagros
Nome Docampo, Claudia
Lenardon, Sergio Luis
Dietzgen, Ralf Georg
Complete genome sequence and integrated protein localization and interaction map for alfalfa dwarf virus, which combines properties of both cytoplasmic and nuclear plant rhabdoviruses
description We have determined the full-length 14,491-nucleotide genome sequence of a new plant rhabdovirus, alfalfa dwarf virus (ADV). Seven open reading frames (ORFs) were identified in the antigenomic orientation of the negative-sense, single-stranded viral RNA, in the order 3′-N-P-P3-M-G-P6-L-5′. The ORFs are separated by conserved intergenic regions and the genome coding region is flanked by complementary 3′ leader and 5′ trailer sequences. Phylogenetic analysis of the nucleoprotein amino acid sequence indicated that this alfalfa-infecting rhabdovirus is related to viruses in the genus Cytorhabdovirus. When transiently expressed as GFP fusions in Nicotiana benthamiana leaves, most ADV proteins accumulated in the cell periphery, but unexpectedly P protein was localized exclusively in the nucleus. ADV P protein was shown to have a homotypic, and heterotypic nuclear interactions with N, P3 and M proteins by bimolecular fluorescence complementation. ADV appears unique in that it combines properties of both cytoplasmic and nuclear plant rhabdoviruses.
format info:ar-repo/semantics/artículo
topic_facet Medicago Sativa
Genomas
Cytorhabdovirus
Nucleorhabdovirus
Proteínas
Fosfoproteínas
Genomes
Proteins
Phosphoproteins
Alfalfa
Rabdovirus
author Bejerman, Nicolas Esteban
Giolitti, Fabian
De Breuil, Soledad
Trucco, Veronica Milagros
Nome Docampo, Claudia
Lenardon, Sergio Luis
Dietzgen, Ralf Georg
author_facet Bejerman, Nicolas Esteban
Giolitti, Fabian
De Breuil, Soledad
Trucco, Veronica Milagros
Nome Docampo, Claudia
Lenardon, Sergio Luis
Dietzgen, Ralf Georg
author_sort Bejerman, Nicolas Esteban
title Complete genome sequence and integrated protein localization and interaction map for alfalfa dwarf virus, which combines properties of both cytoplasmic and nuclear plant rhabdoviruses
title_short Complete genome sequence and integrated protein localization and interaction map for alfalfa dwarf virus, which combines properties of both cytoplasmic and nuclear plant rhabdoviruses
title_full Complete genome sequence and integrated protein localization and interaction map for alfalfa dwarf virus, which combines properties of both cytoplasmic and nuclear plant rhabdoviruses
title_fullStr Complete genome sequence and integrated protein localization and interaction map for alfalfa dwarf virus, which combines properties of both cytoplasmic and nuclear plant rhabdoviruses
title_full_unstemmed Complete genome sequence and integrated protein localization and interaction map for alfalfa dwarf virus, which combines properties of both cytoplasmic and nuclear plant rhabdoviruses
title_sort complete genome sequence and integrated protein localization and interaction map for alfalfa dwarf virus, which combines properties of both cytoplasmic and nuclear plant rhabdoviruses
publisher Elsevier
publishDate 2015-09
url http://hdl.handle.net/20.500.12123/3803
https://www.sciencedirect.com/science/article/pii/S0042682215002457?via%3Dihub
https://doi.org/10.1016/j.virol.2015.05.001
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