No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping

Seedling diseases and root rot, caused by species of Fusarium, can limit soybean (Glycine max L.) production in the United States. Currently, there are few commercially available cultivars resistant to Fusarium. This study was conducted to assess the resistance of soybean maturity group (MG) accessions from 0 and I to Fusarium proliferatum, F. sporotrichioides, and F. subglutinans, as well as to identify common quantitative trait loci (QTL) for resistance to these pathogens, in addition to F. graminearum, using a genome-wide association study (GWAS). A total of 155, 91, and 48 accessions from the USDA soybean germplasm collection from maturity groups 0 and I were screened with a single isolate each of F. proliferatum, F. sporotrichioides, and F. subglutinans, respectively, using the inoculum layer inoculation method in the greenhouse. The disease severity was assessed 21 days post-inoculation and analyzed using non-parametric statistics to determine the relative treatment effects (RTE). Eleven and seven accessions showed significantly lower RTEs when inoculated with F. proliferatum and F. subglutinans, respectively, compared to the susceptible cultivar 'Williams 82'. One accession was significantly less susceptible to both F. proliferatum and F. subglutinans. The GWAS conducted with 41,985 single-nucleotide markers identified one QTL associated with resistance to both F. proliferatum and F. sporotrichioides, as well as another QTL for resistance to both F. subglutinans and F. graminearum. However, no common QTLs were identified for the four pathogens. The USDA accessions and QTLs identified in this study can be utilized to selectively breed resistance to multiple species of Fusarium.

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Main Authors: Rafi, Nitha, Dominguez, Matías, Okello, Paul N., Mathew, Febina Merlin
Format: info:ar-repo/semantics/artículo biblioteca
Language:eng
Published: The American Phytopathological Society 2024-05-08T16:31:19Z
Subjects:Enfermedades de las Plantas, Soja, Resistencia a la Enfermedad, Hongos, Plant Diseases, Soybeans, Fusarium, Fusarium proliferatum, Fusarium sporotrichioides, Gibberella fujikuroi, Disease Resistance, Fungi,
Online Access:http://hdl.handle.net/20.500.12123/17671
https://apsjournals.apsnet.org/doi/pdf/10.1094/PDIS-02-24-0477-RE
https://doi.org/10.1094/PDIS-02-24-0477-RE
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spelling oai:localhost:20.500.12123-176712024-05-08T16:40:01Z No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping Rafi, Nitha Dominguez, Matías Okello, Paul N. Mathew, Febina Merlin Enfermedades de las Plantas Soja Resistencia a la Enfermedad Hongos Plant Diseases Soybeans Fusarium Fusarium proliferatum Fusarium sporotrichioides Gibberella fujikuroi Disease Resistance Fungi Seedling diseases and root rot, caused by species of Fusarium, can limit soybean (Glycine max L.) production in the United States. Currently, there are few commercially available cultivars resistant to Fusarium. This study was conducted to assess the resistance of soybean maturity group (MG) accessions from 0 and I to Fusarium proliferatum, F. sporotrichioides, and F. subglutinans, as well as to identify common quantitative trait loci (QTL) for resistance to these pathogens, in addition to F. graminearum, using a genome-wide association study (GWAS). A total of 155, 91, and 48 accessions from the USDA soybean germplasm collection from maturity groups 0 and I were screened with a single isolate each of F. proliferatum, F. sporotrichioides, and F. subglutinans, respectively, using the inoculum layer inoculation method in the greenhouse. The disease severity was assessed 21 days post-inoculation and analyzed using non-parametric statistics to determine the relative treatment effects (RTE). Eleven and seven accessions showed significantly lower RTEs when inoculated with F. proliferatum and F. subglutinans, respectively, compared to the susceptible cultivar 'Williams 82'. One accession was significantly less susceptible to both F. proliferatum and F. subglutinans. The GWAS conducted with 41,985 single-nucleotide markers identified one QTL associated with resistance to both F. proliferatum and F. sporotrichioides, as well as another QTL for resistance to both F. subglutinans and F. graminearum. However, no common QTLs were identified for the four pathogens. The USDA accessions and QTLs identified in this study can be utilized to selectively breed resistance to multiple species of Fusarium. EEA Pergamino Fil: Rafi, Nitha. North Dakota State University. Plant Pathology; Estados Unidos Fil: Dominguez, Matías. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Sector Girasol; Argentina Fil: Okello, Paul N. South Dakota State University. Agronomy. Horticulture and Plant Science; Estados Unidos Fil: Mathew, Febina Merlin. North Dakota State University. Plant Pathology; Estados Unidos info:eu-repo/date/embargoEnd/2025-05-08 2024-05-08T16:31:19Z 2024-05-08T16:31:19Z 2024-04 info:ar-repo/semantics/artículo info:eu-repo/semantics/article info:eu-repo/semantics/acceptedVersion http://hdl.handle.net/20.500.12123/17671 https://apsjournals.apsnet.org/doi/pdf/10.1094/PDIS-02-24-0477-RE 0191-2917 1943-7692 (online) https://doi.org/10.1094/PDIS-02-24-0477-RE eng info:eu-repo/semantics/embargoedAccess http://creativecommons.org/licenses/by-nc-sa/4.0/ Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) application/pdf The American Phytopathological Society Plant Disease 108 : 38640427. (April 2024)
institution INTA AR
collection DSpace
country Argentina
countrycode AR
component Bibliográfico
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region America del Sur
libraryname Biblioteca Central del INTA Argentina
language eng
topic Enfermedades de las Plantas
Soja
Resistencia a la Enfermedad
Hongos
Plant Diseases
Soybeans
Fusarium
Fusarium proliferatum
Fusarium sporotrichioides
Gibberella fujikuroi
Disease Resistance
Fungi
Enfermedades de las Plantas
Soja
Resistencia a la Enfermedad
Hongos
Plant Diseases
Soybeans
Fusarium
Fusarium proliferatum
Fusarium sporotrichioides
Gibberella fujikuroi
Disease Resistance
Fungi
spellingShingle Enfermedades de las Plantas
Soja
Resistencia a la Enfermedad
Hongos
Plant Diseases
Soybeans
Fusarium
Fusarium proliferatum
Fusarium sporotrichioides
Gibberella fujikuroi
Disease Resistance
Fungi
Enfermedades de las Plantas
Soja
Resistencia a la Enfermedad
Hongos
Plant Diseases
Soybeans
Fusarium
Fusarium proliferatum
Fusarium sporotrichioides
Gibberella fujikuroi
Disease Resistance
Fungi
Rafi, Nitha
Dominguez, Matías
Okello, Paul N.
Mathew, Febina Merlin
No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
description Seedling diseases and root rot, caused by species of Fusarium, can limit soybean (Glycine max L.) production in the United States. Currently, there are few commercially available cultivars resistant to Fusarium. This study was conducted to assess the resistance of soybean maturity group (MG) accessions from 0 and I to Fusarium proliferatum, F. sporotrichioides, and F. subglutinans, as well as to identify common quantitative trait loci (QTL) for resistance to these pathogens, in addition to F. graminearum, using a genome-wide association study (GWAS). A total of 155, 91, and 48 accessions from the USDA soybean germplasm collection from maturity groups 0 and I were screened with a single isolate each of F. proliferatum, F. sporotrichioides, and F. subglutinans, respectively, using the inoculum layer inoculation method in the greenhouse. The disease severity was assessed 21 days post-inoculation and analyzed using non-parametric statistics to determine the relative treatment effects (RTE). Eleven and seven accessions showed significantly lower RTEs when inoculated with F. proliferatum and F. subglutinans, respectively, compared to the susceptible cultivar 'Williams 82'. One accession was significantly less susceptible to both F. proliferatum and F. subglutinans. The GWAS conducted with 41,985 single-nucleotide markers identified one QTL associated with resistance to both F. proliferatum and F. sporotrichioides, as well as another QTL for resistance to both F. subglutinans and F. graminearum. However, no common QTLs were identified for the four pathogens. The USDA accessions and QTLs identified in this study can be utilized to selectively breed resistance to multiple species of Fusarium.
format info:ar-repo/semantics/artículo
topic_facet Enfermedades de las Plantas
Soja
Resistencia a la Enfermedad
Hongos
Plant Diseases
Soybeans
Fusarium
Fusarium proliferatum
Fusarium sporotrichioides
Gibberella fujikuroi
Disease Resistance
Fungi
author Rafi, Nitha
Dominguez, Matías
Okello, Paul N.
Mathew, Febina Merlin
author_facet Rafi, Nitha
Dominguez, Matías
Okello, Paul N.
Mathew, Febina Merlin
author_sort Rafi, Nitha
title No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
title_short No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
title_full No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
title_fullStr No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
title_full_unstemmed No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
title_sort no common candidate genes for resistance to fusarium graminearum, f. proliferatum, f. sporotrichioides, and f. subglutanins in soybean (glycine max l.) accessions from maturity groups 0 and i: findings from genome-wide association mapping
publisher The American Phytopathological Society
publishDate 2024-05-08T16:31:19Z
url http://hdl.handle.net/20.500.12123/17671
https://apsjournals.apsnet.org/doi/pdf/10.1094/PDIS-02-24-0477-RE
https://doi.org/10.1094/PDIS-02-24-0477-RE
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