No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
Seedling diseases and root rot, caused by species of Fusarium, can limit soybean (Glycine max L.) production in the United States. Currently, there are few commercially available cultivars resistant to Fusarium. This study was conducted to assess the resistance of soybean maturity group (MG) accessions from 0 and I to Fusarium proliferatum, F. sporotrichioides, and F. subglutinans, as well as to identify common quantitative trait loci (QTL) for resistance to these pathogens, in addition to F. graminearum, using a genome-wide association study (GWAS). A total of 155, 91, and 48 accessions from the USDA soybean germplasm collection from maturity groups 0 and I were screened with a single isolate each of F. proliferatum, F. sporotrichioides, and F. subglutinans, respectively, using the inoculum layer inoculation method in the greenhouse. The disease severity was assessed 21 days post-inoculation and analyzed using non-parametric statistics to determine the relative treatment effects (RTE). Eleven and seven accessions showed significantly lower RTEs when inoculated with F. proliferatum and F. subglutinans, respectively, compared to the susceptible cultivar 'Williams 82'. One accession was significantly less susceptible to both F. proliferatum and F. subglutinans. The GWAS conducted with 41,985 single-nucleotide markers identified one QTL associated with resistance to both F. proliferatum and F. sporotrichioides, as well as another QTL for resistance to both F. subglutinans and F. graminearum. However, no common QTLs were identified for the four pathogens. The USDA accessions and QTLs identified in this study can be utilized to selectively breed resistance to multiple species of Fusarium.
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The American Phytopathological Society
2024-05-08T16:31:19Z
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Subjects: | Enfermedades de las Plantas, Soja, Resistencia a la Enfermedad, Hongos, Plant Diseases, Soybeans, Fusarium, Fusarium proliferatum, Fusarium sporotrichioides, Gibberella fujikuroi, Disease Resistance, Fungi, |
Online Access: | http://hdl.handle.net/20.500.12123/17671 https://apsjournals.apsnet.org/doi/pdf/10.1094/PDIS-02-24-0477-RE https://doi.org/10.1094/PDIS-02-24-0477-RE |
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oai:localhost:20.500.12123-176712024-05-08T16:40:01Z No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping Rafi, Nitha Dominguez, Matías Okello, Paul N. Mathew, Febina Merlin Enfermedades de las Plantas Soja Resistencia a la Enfermedad Hongos Plant Diseases Soybeans Fusarium Fusarium proliferatum Fusarium sporotrichioides Gibberella fujikuroi Disease Resistance Fungi Seedling diseases and root rot, caused by species of Fusarium, can limit soybean (Glycine max L.) production in the United States. Currently, there are few commercially available cultivars resistant to Fusarium. This study was conducted to assess the resistance of soybean maturity group (MG) accessions from 0 and I to Fusarium proliferatum, F. sporotrichioides, and F. subglutinans, as well as to identify common quantitative trait loci (QTL) for resistance to these pathogens, in addition to F. graminearum, using a genome-wide association study (GWAS). A total of 155, 91, and 48 accessions from the USDA soybean germplasm collection from maturity groups 0 and I were screened with a single isolate each of F. proliferatum, F. sporotrichioides, and F. subglutinans, respectively, using the inoculum layer inoculation method in the greenhouse. The disease severity was assessed 21 days post-inoculation and analyzed using non-parametric statistics to determine the relative treatment effects (RTE). Eleven and seven accessions showed significantly lower RTEs when inoculated with F. proliferatum and F. subglutinans, respectively, compared to the susceptible cultivar 'Williams 82'. One accession was significantly less susceptible to both F. proliferatum and F. subglutinans. The GWAS conducted with 41,985 single-nucleotide markers identified one QTL associated with resistance to both F. proliferatum and F. sporotrichioides, as well as another QTL for resistance to both F. subglutinans and F. graminearum. However, no common QTLs were identified for the four pathogens. The USDA accessions and QTLs identified in this study can be utilized to selectively breed resistance to multiple species of Fusarium. EEA Pergamino Fil: Rafi, Nitha. North Dakota State University. Plant Pathology; Estados Unidos Fil: Dominguez, Matías. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Sector Girasol; Argentina Fil: Okello, Paul N. South Dakota State University. Agronomy. Horticulture and Plant Science; Estados Unidos Fil: Mathew, Febina Merlin. North Dakota State University. Plant Pathology; Estados Unidos info:eu-repo/date/embargoEnd/2025-05-08 2024-05-08T16:31:19Z 2024-05-08T16:31:19Z 2024-04 info:ar-repo/semantics/artículo info:eu-repo/semantics/article info:eu-repo/semantics/acceptedVersion http://hdl.handle.net/20.500.12123/17671 https://apsjournals.apsnet.org/doi/pdf/10.1094/PDIS-02-24-0477-RE 0191-2917 1943-7692 (online) https://doi.org/10.1094/PDIS-02-24-0477-RE eng info:eu-repo/semantics/embargoedAccess http://creativecommons.org/licenses/by-nc-sa/4.0/ Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) application/pdf The American Phytopathological Society Plant Disease 108 : 38640427. (April 2024) |
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Enfermedades de las Plantas Soja Resistencia a la Enfermedad Hongos Plant Diseases Soybeans Fusarium Fusarium proliferatum Fusarium sporotrichioides Gibberella fujikuroi Disease Resistance Fungi Enfermedades de las Plantas Soja Resistencia a la Enfermedad Hongos Plant Diseases Soybeans Fusarium Fusarium proliferatum Fusarium sporotrichioides Gibberella fujikuroi Disease Resistance Fungi |
spellingShingle |
Enfermedades de las Plantas Soja Resistencia a la Enfermedad Hongos Plant Diseases Soybeans Fusarium Fusarium proliferatum Fusarium sporotrichioides Gibberella fujikuroi Disease Resistance Fungi Enfermedades de las Plantas Soja Resistencia a la Enfermedad Hongos Plant Diseases Soybeans Fusarium Fusarium proliferatum Fusarium sporotrichioides Gibberella fujikuroi Disease Resistance Fungi Rafi, Nitha Dominguez, Matías Okello, Paul N. Mathew, Febina Merlin No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping |
description |
Seedling diseases and root rot, caused by species of Fusarium, can limit soybean (Glycine max L.) production in the United States. Currently, there are few commercially available cultivars resistant to Fusarium. This study was conducted to assess the resistance of soybean maturity group (MG) accessions from 0 and I to Fusarium proliferatum, F. sporotrichioides, and F. subglutinans, as well as to identify common quantitative trait loci (QTL) for resistance to these pathogens, in addition to F. graminearum, using a genome-wide association study (GWAS). A total of 155, 91, and 48 accessions from the USDA soybean germplasm collection from maturity groups 0 and I were screened with a single isolate each of F. proliferatum, F. sporotrichioides, and F. subglutinans, respectively, using the inoculum layer inoculation method in the greenhouse. The disease severity was assessed 21 days post-inoculation and analyzed using non-parametric statistics to determine the relative treatment effects (RTE). Eleven and seven accessions showed significantly lower RTEs when inoculated with F. proliferatum and F. subglutinans, respectively, compared to the susceptible cultivar 'Williams 82'. One accession was significantly less susceptible to both F. proliferatum and F. subglutinans. The GWAS conducted with 41,985 single-nucleotide markers identified one QTL associated with resistance to both F. proliferatum and F. sporotrichioides, as well as another QTL for resistance to both F. subglutinans and F. graminearum. However, no common QTLs were identified for the four pathogens. The USDA accessions and QTLs identified in this study can be utilized to selectively breed resistance to multiple species of Fusarium. |
format |
info:ar-repo/semantics/artículo |
topic_facet |
Enfermedades de las Plantas Soja Resistencia a la Enfermedad Hongos Plant Diseases Soybeans Fusarium Fusarium proliferatum Fusarium sporotrichioides Gibberella fujikuroi Disease Resistance Fungi |
author |
Rafi, Nitha Dominguez, Matías Okello, Paul N. Mathew, Febina Merlin |
author_facet |
Rafi, Nitha Dominguez, Matías Okello, Paul N. Mathew, Febina Merlin |
author_sort |
Rafi, Nitha |
title |
No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping |
title_short |
No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping |
title_full |
No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping |
title_fullStr |
No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping |
title_full_unstemmed |
No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping |
title_sort |
no common candidate genes for resistance to fusarium graminearum, f. proliferatum, f. sporotrichioides, and f. subglutanins in soybean (glycine max l.) accessions from maturity groups 0 and i: findings from genome-wide association mapping |
publisher |
The American Phytopathological Society |
publishDate |
2024-05-08T16:31:19Z |
url |
http://hdl.handle.net/20.500.12123/17671 https://apsjournals.apsnet.org/doi/pdf/10.1094/PDIS-02-24-0477-RE https://doi.org/10.1094/PDIS-02-24-0477-RE |
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