Automated identification and counting of predated Ephestia kuehniella (Zeller) eggs using deep learning image analysis

Predation or kill rate of biological control agents is often used as a proxy to evaluate the efficacy of different species of natural enemies and under different conditions. For generalist predators and many egg parasitoids, eggs of the Mediterranean flour moth Ephestia kuehniella (Zeller) (Lepidoptera: Pyralidae) are used as factitious prey or hosts in laboratory and field experiments, as they are widely available from mass rearings of the biological control industry. Evaluating the predation or parasitism activity of natural enemies on E. kuehniella is a valuable tool for biological control practitioners around the world. However, manual assessments are laborious and prone to error, as observations may be subjective and depend on the individual performing the task. Here, we developed an automated protocol based on the deep learning object detection algorithm YOLOv5, for the accurate estimation of predated E. kuehniella eggs by piercing-sucking generalist predators. The application of the trained deep learning model achieved high precision (0.90) and recall (0.93) in the identification of predated eggs among intact eggs in our test experiment and was more accurate and faster than two independent observers that performed manual counting under a stereo microscope based on the mean absolute percentage error metric. Furthermore, a case study is presented where the predation activity of the generalist predators Orius laevigatus, Orius majusculus, Orius minutus, Nesidiocoris tenuis, Macrolophus pygmaeus, and Dicyphus errans is compared. Further applications and expansions of the protocol are discussed.

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Bibliographic Details
Main Authors: Mouratidis, Angelos, Hemming, Jochen, Messelink, Gerben J., van Marrewijk, Bart
Format: Article/Letter to editor biblioteca
Language:English
Subjects:Anthocoridae, Generalist predator, Miridae, Object detection, Sentinel prey, YOLOv5,
Online Access:https://research.wur.nl/en/publications/automated-identification-and-counting-of-predated-ephestia-kuehni
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spelling dig-wur-nl-wurpubs-6193532024-12-04 Mouratidis, Angelos Hemming, Jochen Messelink, Gerben J. van Marrewijk, Bart Article/Letter to editor Biological Control 186 (2023) ISSN: 1049-9644 Automated identification and counting of predated Ephestia kuehniella (Zeller) eggs using deep learning image analysis 2023 Predation or kill rate of biological control agents is often used as a proxy to evaluate the efficacy of different species of natural enemies and under different conditions. For generalist predators and many egg parasitoids, eggs of the Mediterranean flour moth Ephestia kuehniella (Zeller) (Lepidoptera: Pyralidae) are used as factitious prey or hosts in laboratory and field experiments, as they are widely available from mass rearings of the biological control industry. Evaluating the predation or parasitism activity of natural enemies on E. kuehniella is a valuable tool for biological control practitioners around the world. However, manual assessments are laborious and prone to error, as observations may be subjective and depend on the individual performing the task. Here, we developed an automated protocol based on the deep learning object detection algorithm YOLOv5, for the accurate estimation of predated E. kuehniella eggs by piercing-sucking generalist predators. The application of the trained deep learning model achieved high precision (0.90) and recall (0.93) in the identification of predated eggs among intact eggs in our test experiment and was more accurate and faster than two independent observers that performed manual counting under a stereo microscope based on the mean absolute percentage error metric. Furthermore, a case study is presented where the predation activity of the generalist predators Orius laevigatus, Orius majusculus, Orius minutus, Nesidiocoris tenuis, Macrolophus pygmaeus, and Dicyphus errans is compared. Further applications and expansions of the protocol are discussed. en application/pdf https://research.wur.nl/en/publications/automated-identification-and-counting-of-predated-ephestia-kuehni 10.1016/j.biocontrol.2023.105345 https://edepot.wur.nl/639037 Anthocoridae Generalist predator Miridae Object detection Sentinel prey YOLOv5 https://creativecommons.org/licenses/by/4.0/ https://creativecommons.org/licenses/by/4.0/ Wageningen University & Research
institution WUR NL
collection DSpace
country Países bajos
countrycode NL
component Bibliográfico
access En linea
databasecode dig-wur-nl
tag biblioteca
region Europa del Oeste
libraryname WUR Library Netherlands
language English
topic Anthocoridae
Generalist predator
Miridae
Object detection
Sentinel prey
YOLOv5
Anthocoridae
Generalist predator
Miridae
Object detection
Sentinel prey
YOLOv5
spellingShingle Anthocoridae
Generalist predator
Miridae
Object detection
Sentinel prey
YOLOv5
Anthocoridae
Generalist predator
Miridae
Object detection
Sentinel prey
YOLOv5
Mouratidis, Angelos
Hemming, Jochen
Messelink, Gerben J.
van Marrewijk, Bart
Automated identification and counting of predated Ephestia kuehniella (Zeller) eggs using deep learning image analysis
description Predation or kill rate of biological control agents is often used as a proxy to evaluate the efficacy of different species of natural enemies and under different conditions. For generalist predators and many egg parasitoids, eggs of the Mediterranean flour moth Ephestia kuehniella (Zeller) (Lepidoptera: Pyralidae) are used as factitious prey or hosts in laboratory and field experiments, as they are widely available from mass rearings of the biological control industry. Evaluating the predation or parasitism activity of natural enemies on E. kuehniella is a valuable tool for biological control practitioners around the world. However, manual assessments are laborious and prone to error, as observations may be subjective and depend on the individual performing the task. Here, we developed an automated protocol based on the deep learning object detection algorithm YOLOv5, for the accurate estimation of predated E. kuehniella eggs by piercing-sucking generalist predators. The application of the trained deep learning model achieved high precision (0.90) and recall (0.93) in the identification of predated eggs among intact eggs in our test experiment and was more accurate and faster than two independent observers that performed manual counting under a stereo microscope based on the mean absolute percentage error metric. Furthermore, a case study is presented where the predation activity of the generalist predators Orius laevigatus, Orius majusculus, Orius minutus, Nesidiocoris tenuis, Macrolophus pygmaeus, and Dicyphus errans is compared. Further applications and expansions of the protocol are discussed.
format Article/Letter to editor
topic_facet Anthocoridae
Generalist predator
Miridae
Object detection
Sentinel prey
YOLOv5
author Mouratidis, Angelos
Hemming, Jochen
Messelink, Gerben J.
van Marrewijk, Bart
author_facet Mouratidis, Angelos
Hemming, Jochen
Messelink, Gerben J.
van Marrewijk, Bart
author_sort Mouratidis, Angelos
title Automated identification and counting of predated Ephestia kuehniella (Zeller) eggs using deep learning image analysis
title_short Automated identification and counting of predated Ephestia kuehniella (Zeller) eggs using deep learning image analysis
title_full Automated identification and counting of predated Ephestia kuehniella (Zeller) eggs using deep learning image analysis
title_fullStr Automated identification and counting of predated Ephestia kuehniella (Zeller) eggs using deep learning image analysis
title_full_unstemmed Automated identification and counting of predated Ephestia kuehniella (Zeller) eggs using deep learning image analysis
title_sort automated identification and counting of predated ephestia kuehniella (zeller) eggs using deep learning image analysis
url https://research.wur.nl/en/publications/automated-identification-and-counting-of-predated-ephestia-kuehni
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AT hemmingjochen automatedidentificationandcountingofpredatedephestiakuehniellazellereggsusingdeeplearningimageanalysis
AT messelinkgerbenj automatedidentificationandcountingofpredatedephestiakuehniellazellereggsusingdeeplearningimageanalysis
AT vanmarrewijkbart automatedidentificationandcountingofpredatedephestiakuehniellazellereggsusingdeeplearningimageanalysis
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