Cross-Validation of Generic Risk Assessment Tools for Animal Disease Incursion Based on a Case Study for African Swine Fever

In recent years, several generic risk assessment (RA) tools have been developed that can be applied to assess the incursion risk of multiple infectious animal diseases allowing for a rapid response to a variety of newly emerging or re-emerging diseases. Although these tools were originally developed for different purposes, they can be used to answer similar or even identical risk questions. To explore the opportunities for cross-validation, seven generic RA tools were used to assess the incursion risk of African swine fever (ASF) to the Netherlands and Finland for the 2017 situation and for two hypothetical scenarios in which ASF cases were reported in wild boar and/or domestic pigs in Germany. The generic tools ranged from qualitative risk assessment tools to stochastic spatial risk models but were all parameterized using the same global databases for disease occurrence and trade in live animals and animal products. A comparison of absolute results was not possible, because output parameters represented different endpoints, varied from qualitative probability levels to quantitative numbers, and were expressed in different units. Therefore, relative risks across countries and scenarios were calculated for each tool, for the three pathways most in common (trade in live animals, trade in animal products, and wild boar movements) and compared. For the 2017 situation, all tools evaluated the risk to the Netherlands to be higher than Finland for the live animal trade pathway, the risk to Finland the same or higher as the Netherlands for the wild boar pathway, while the tools were inconclusive on the animal products pathway. All tools agreed that the hypothetical presence of ASF in Germany increased the risk to the Netherlands, but not to Finland. The ultimate aim of generic RA tools is to provide risk-based evidence to support risk managers in making informed decisions to mitigate the incursion risk of infectious animal diseases. The case study illustrated that conclusions on the ASF risk were similar across the generic RA tools, despite differences observed in calculated risks. Hence, it was concluded that the cross-validation contributed to the credibility of their results.

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Main Authors: de Vos, Clazien J., Taylor, Rachel A., Simons, Robin R.L., Roberts, Helen, Hultén, Cecilia, de Koeijer, Aline A., Lyytikäinen, Tapani, Napp, Sebastian, Boklund, Anette, Petie, Ronald, Sörén, Kaisa, Swanenburg, Manon, Comin, Arianna, Seppä-Lassila, Leena, Cabral, Maria, Snary, Emma L.
Format: Article/Letter to editor biblioteca
Language:English
Subjects:African swine fever, cross-validation, generic model, introduction risk, livestock diseases, model uncertainty, risk assessment,
Online Access:https://research.wur.nl/en/publications/cross-validation-of-generic-risk-assessment-tools-for-animal-dise
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spelling dig-wur-nl-wurpubs-5629642024-12-04 de Vos, Clazien J. Taylor, Rachel A. Simons, Robin R.L. Roberts, Helen Hultén, Cecilia de Koeijer, Aline A. Lyytikäinen, Tapani Napp, Sebastian Boklund, Anette Petie, Ronald Sörén, Kaisa Swanenburg, Manon Comin, Arianna Seppä-Lassila, Leena Cabral, Maria Snary, Emma L. Article/Letter to editor Frontiers in Veterinary Science 7 (2020) ISSN: 2297-1769 Cross-Validation of Generic Risk Assessment Tools for Animal Disease Incursion Based on a Case Study for African Swine Fever 2020 In recent years, several generic risk assessment (RA) tools have been developed that can be applied to assess the incursion risk of multiple infectious animal diseases allowing for a rapid response to a variety of newly emerging or re-emerging diseases. Although these tools were originally developed for different purposes, they can be used to answer similar or even identical risk questions. To explore the opportunities for cross-validation, seven generic RA tools were used to assess the incursion risk of African swine fever (ASF) to the Netherlands and Finland for the 2017 situation and for two hypothetical scenarios in which ASF cases were reported in wild boar and/or domestic pigs in Germany. The generic tools ranged from qualitative risk assessment tools to stochastic spatial risk models but were all parameterized using the same global databases for disease occurrence and trade in live animals and animal products. A comparison of absolute results was not possible, because output parameters represented different endpoints, varied from qualitative probability levels to quantitative numbers, and were expressed in different units. Therefore, relative risks across countries and scenarios were calculated for each tool, for the three pathways most in common (trade in live animals, trade in animal products, and wild boar movements) and compared. For the 2017 situation, all tools evaluated the risk to the Netherlands to be higher than Finland for the live animal trade pathway, the risk to Finland the same or higher as the Netherlands for the wild boar pathway, while the tools were inconclusive on the animal products pathway. All tools agreed that the hypothetical presence of ASF in Germany increased the risk to the Netherlands, but not to Finland. The ultimate aim of generic RA tools is to provide risk-based evidence to support risk managers in making informed decisions to mitigate the incursion risk of infectious animal diseases. The case study illustrated that conclusions on the ASF risk were similar across the generic RA tools, despite differences observed in calculated risks. Hence, it was concluded that the cross-validation contributed to the credibility of their results. en application/pdf https://research.wur.nl/en/publications/cross-validation-of-generic-risk-assessment-tools-for-animal-dise 10.3389/fvets.2020.00056 https://edepot.wur.nl/518872 African swine fever cross-validation generic model introduction risk livestock diseases model uncertainty risk assessment https://creativecommons.org/licenses/by/4.0/ https://creativecommons.org/licenses/by/4.0/ Wageningen University & Research
institution WUR NL
collection DSpace
country Países bajos
countrycode NL
component Bibliográfico
access En linea
databasecode dig-wur-nl
tag biblioteca
region Europa del Oeste
libraryname WUR Library Netherlands
language English
topic African swine fever
cross-validation
generic model
introduction risk
livestock diseases
model uncertainty
risk assessment
African swine fever
cross-validation
generic model
introduction risk
livestock diseases
model uncertainty
risk assessment
spellingShingle African swine fever
cross-validation
generic model
introduction risk
livestock diseases
model uncertainty
risk assessment
African swine fever
cross-validation
generic model
introduction risk
livestock diseases
model uncertainty
risk assessment
de Vos, Clazien J.
Taylor, Rachel A.
Simons, Robin R.L.
Roberts, Helen
Hultén, Cecilia
de Koeijer, Aline A.
Lyytikäinen, Tapani
Napp, Sebastian
Boklund, Anette
Petie, Ronald
Sörén, Kaisa
Swanenburg, Manon
Comin, Arianna
Seppä-Lassila, Leena
Cabral, Maria
Snary, Emma L.
Cross-Validation of Generic Risk Assessment Tools for Animal Disease Incursion Based on a Case Study for African Swine Fever
description In recent years, several generic risk assessment (RA) tools have been developed that can be applied to assess the incursion risk of multiple infectious animal diseases allowing for a rapid response to a variety of newly emerging or re-emerging diseases. Although these tools were originally developed for different purposes, they can be used to answer similar or even identical risk questions. To explore the opportunities for cross-validation, seven generic RA tools were used to assess the incursion risk of African swine fever (ASF) to the Netherlands and Finland for the 2017 situation and for two hypothetical scenarios in which ASF cases were reported in wild boar and/or domestic pigs in Germany. The generic tools ranged from qualitative risk assessment tools to stochastic spatial risk models but were all parameterized using the same global databases for disease occurrence and trade in live animals and animal products. A comparison of absolute results was not possible, because output parameters represented different endpoints, varied from qualitative probability levels to quantitative numbers, and were expressed in different units. Therefore, relative risks across countries and scenarios were calculated for each tool, for the three pathways most in common (trade in live animals, trade in animal products, and wild boar movements) and compared. For the 2017 situation, all tools evaluated the risk to the Netherlands to be higher than Finland for the live animal trade pathway, the risk to Finland the same or higher as the Netherlands for the wild boar pathway, while the tools were inconclusive on the animal products pathway. All tools agreed that the hypothetical presence of ASF in Germany increased the risk to the Netherlands, but not to Finland. The ultimate aim of generic RA tools is to provide risk-based evidence to support risk managers in making informed decisions to mitigate the incursion risk of infectious animal diseases. The case study illustrated that conclusions on the ASF risk were similar across the generic RA tools, despite differences observed in calculated risks. Hence, it was concluded that the cross-validation contributed to the credibility of their results.
format Article/Letter to editor
topic_facet African swine fever
cross-validation
generic model
introduction risk
livestock diseases
model uncertainty
risk assessment
author de Vos, Clazien J.
Taylor, Rachel A.
Simons, Robin R.L.
Roberts, Helen
Hultén, Cecilia
de Koeijer, Aline A.
Lyytikäinen, Tapani
Napp, Sebastian
Boklund, Anette
Petie, Ronald
Sörén, Kaisa
Swanenburg, Manon
Comin, Arianna
Seppä-Lassila, Leena
Cabral, Maria
Snary, Emma L.
author_facet de Vos, Clazien J.
Taylor, Rachel A.
Simons, Robin R.L.
Roberts, Helen
Hultén, Cecilia
de Koeijer, Aline A.
Lyytikäinen, Tapani
Napp, Sebastian
Boklund, Anette
Petie, Ronald
Sörén, Kaisa
Swanenburg, Manon
Comin, Arianna
Seppä-Lassila, Leena
Cabral, Maria
Snary, Emma L.
author_sort de Vos, Clazien J.
title Cross-Validation of Generic Risk Assessment Tools for Animal Disease Incursion Based on a Case Study for African Swine Fever
title_short Cross-Validation of Generic Risk Assessment Tools for Animal Disease Incursion Based on a Case Study for African Swine Fever
title_full Cross-Validation of Generic Risk Assessment Tools for Animal Disease Incursion Based on a Case Study for African Swine Fever
title_fullStr Cross-Validation of Generic Risk Assessment Tools for Animal Disease Incursion Based on a Case Study for African Swine Fever
title_full_unstemmed Cross-Validation of Generic Risk Assessment Tools for Animal Disease Incursion Based on a Case Study for African Swine Fever
title_sort cross-validation of generic risk assessment tools for animal disease incursion based on a case study for african swine fever
url https://research.wur.nl/en/publications/cross-validation-of-generic-risk-assessment-tools-for-animal-dise
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