Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus ATCC 10987

Planktonic and biofilm cells of Bacillus cereus ATCC 14579 and ATCC 10987 were studied using microscopy and transcriptome analysis. By microscopy, clear differences could be observed between biofilm and planktonic cells as well as between the two strains. By using hierarchical clustering of the transcriptome data, little difference was observed between the biofilm cells of B. cereus ATCC 14579 and ATCC 10987. Different responses between biofilm and planktonic cells could be identified using transcriptome analysis. Biofilm formation seemed to cause a shift in metabolism with up- or down-regulation of genes involved in different metabolic pathways. Genes involved in motility were down-regulated. No clear up-regulation related to capsular or extracellular polysaccharides was observed. Sporulation was observed in biofilm cells using microscopy, which was corroborated with up-regulation of genes involved in sporulation in biofilm cells. The results obtained in this study provide insight in general and strain specific behavior of B. cereus cells in multicellular communities.

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Bibliographic Details
Main Authors: Wijman, Janneke, Mols, M., Tempelaars, Marcel, Abee, Tjakko
Format: Dataset biblioteca
Published: Wageningen UR
Subjects:Bacillus cereus ATCC 10987, Bacillus cereus,
Online Access:https://research.wur.nl/en/datasets/comparative-transcriptome-analysis-of-biofilm-and-planktonic-cell
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spelling dig-wur-nl-wurpubs-5298832024-06-25 Wijman, Janneke Mols, M. Tempelaars, Marcel Abee, Tjakko Dataset Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus ATCC 10987 2015 Planktonic and biofilm cells of Bacillus cereus ATCC 14579 and ATCC 10987 were studied using microscopy and transcriptome analysis. By microscopy, clear differences could be observed between biofilm and planktonic cells as well as between the two strains. By using hierarchical clustering of the transcriptome data, little difference was observed between the biofilm cells of B. cereus ATCC 14579 and ATCC 10987. Different responses between biofilm and planktonic cells could be identified using transcriptome analysis. Biofilm formation seemed to cause a shift in metabolism with up- or down-regulation of genes involved in different metabolic pathways. Genes involved in motility were down-regulated. No clear up-regulation related to capsular or extracellular polysaccharides was observed. Sporulation was observed in biofilm cells using microscopy, which was corroborated with up-regulation of genes involved in sporulation in biofilm cells. The results obtained in this study provide insight in general and strain specific behavior of B. cereus cells in multicellular communities. Planktonic and biofilm cells of Bacillus cereus ATCC 14579 and ATCC 10987 were studied using microscopy and transcriptome analysis. By microscopy, clear differences could be observed between biofilm and planktonic cells as well as between the two strains. By using hierarchical clustering of the transcriptome data, little difference was observed between the biofilm cells of B. cereus ATCC 14579 and ATCC 10987. Different responses between biofilm and planktonic cells could be identified using transcriptome analysis. Biofilm formation seemed to cause a shift in metabolism with up- or down-regulation of genes involved in different metabolic pathways. Genes involved in motility were down-regulated. No clear up-regulation related to capsular or extracellular polysaccharides was observed. Sporulation was observed in biofilm cells using microscopy, which was corroborated with up-regulation of genes involved in sporulation in biofilm cells. The results obtained in this study provide insight in general and strain specific behavior of B. cereus cells in multicellular communities. Wageningen UR text/html https://research.wur.nl/en/datasets/comparative-transcriptome-analysis-of-biofilm-and-planktonic-cell https://edepot.wur.nl/427571 Bacillus cereus ATCC 10987 Bacillus cereus Wageningen University & Research
institution WUR NL
collection DSpace
country Países bajos
countrycode NL
component Bibliográfico
access En linea
databasecode dig-wur-nl
tag biblioteca
region Europa del Oeste
libraryname WUR Library Netherlands
topic Bacillus cereus ATCC 10987
Bacillus cereus
Bacillus cereus ATCC 10987
Bacillus cereus
spellingShingle Bacillus cereus ATCC 10987
Bacillus cereus
Bacillus cereus ATCC 10987
Bacillus cereus
Wijman, Janneke
Mols, M.
Tempelaars, Marcel
Abee, Tjakko
Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus ATCC 10987
description Planktonic and biofilm cells of Bacillus cereus ATCC 14579 and ATCC 10987 were studied using microscopy and transcriptome analysis. By microscopy, clear differences could be observed between biofilm and planktonic cells as well as between the two strains. By using hierarchical clustering of the transcriptome data, little difference was observed between the biofilm cells of B. cereus ATCC 14579 and ATCC 10987. Different responses between biofilm and planktonic cells could be identified using transcriptome analysis. Biofilm formation seemed to cause a shift in metabolism with up- or down-regulation of genes involved in different metabolic pathways. Genes involved in motility were down-regulated. No clear up-regulation related to capsular or extracellular polysaccharides was observed. Sporulation was observed in biofilm cells using microscopy, which was corroborated with up-regulation of genes involved in sporulation in biofilm cells. The results obtained in this study provide insight in general and strain specific behavior of B. cereus cells in multicellular communities.
format Dataset
topic_facet Bacillus cereus ATCC 10987
Bacillus cereus
author Wijman, Janneke
Mols, M.
Tempelaars, Marcel
Abee, Tjakko
author_facet Wijman, Janneke
Mols, M.
Tempelaars, Marcel
Abee, Tjakko
author_sort Wijman, Janneke
title Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus ATCC 10987
title_short Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus ATCC 10987
title_full Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus ATCC 10987
title_fullStr Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus ATCC 10987
title_full_unstemmed Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus ATCC 10987
title_sort comparative transcriptome analysis of biofilm and planktonic cells of bacillus cereus atcc 10987
publisher Wageningen UR
url https://research.wur.nl/en/datasets/comparative-transcriptome-analysis-of-biofilm-and-planktonic-cell
work_keys_str_mv AT wijmanjanneke comparativetranscriptomeanalysisofbiofilmandplanktoniccellsofbacilluscereusatcc10987
AT molsm comparativetranscriptomeanalysisofbiofilmandplanktoniccellsofbacilluscereusatcc10987
AT tempelaarsmarcel comparativetranscriptomeanalysisofbiofilmandplanktoniccellsofbacilluscereusatcc10987
AT abeetjakko comparativetranscriptomeanalysisofbiofilmandplanktoniccellsofbacilluscereusatcc10987
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