Toward Reliable Lipoprotein Particle Predictions from NMR Spectra of Human Blood : An Interlaboratory Ring Test

Lipoprotein profiling of human blood by 1H nuclear magnetic resonance (NMR) spectroscopy is a rapid and promising approach to monitor health and disease states in medicine and nutrition. However, lack of standardization of measurement protocols has prevented the use of NMR-based lipoprotein profiling in metastudies. In this study, a standardized NMR measurement protocol was applied in a ring test performed across three different laboratories in Europe on plasma and serum samples from 28 individuals. Data was evaluated in terms of (i) spectral differences, (ii) differences in LPD predictions obtained using an existing prediction model, and (iii) agreement of predictions with cholesterol concentrations in high- and low-density lipoproteins (HDL and LDL) particles measured by standardized clinical assays. ANOVA-simultaneous component analysis (ASCA) of the ring test spectral ensemble that contains methylene and methyl peaks (1.4-0.6 ppm) showed that 97.99% of the variance in the data is related to subject, 1.62% to sample type (serum or plasma), and 0.39% to laboratory. This interlaboratory variation is in fact smaller than the maximum acceptable intralaboratory variation on quality control samples. It is also shown that the reproducibility between laboratories is good enough for the LPD predictions to be exchangeable when the standardized NMR measurement protocol is followed. With the successful implementation of this protocol, which results in reproducible prediction of lipoprotein distributions across laboratories, a step is taken toward bringing NMR more into scope of prognostic and diagnostic biomarkers, reducing the need for less efficient methods such as ultracentrifugation or high-performance liquid chromatography (HPLC).

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Main Authors: Monsonis Centelles, Sandra, Hoefsloot, Huub C.J., Khakimov, Bekzod, Ebrahimi, Parvaneh, Lind, Mads V., Kristensen, Mette, De Roo, Niels, Jacobs, Doris M., Van Duynhoven, John, Cannet, Claire, Fang, Fang, Humpfer, Eberhard, Schäfer, Hartmut, Spraul, Manfred, Engelsen, Søren B., Smilde, Age K.
Format: Article/Letter to editor biblioteca
Language:English
Subjects:Life Science,
Online Access:https://research.wur.nl/en/publications/toward-reliable-lipoprotein-particle-predictions-from-nmr-spectra
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spelling dig-wur-nl-wurpubs-5247582024-12-04 Monsonis Centelles, Sandra Hoefsloot, Huub C.J. Khakimov, Bekzod Ebrahimi, Parvaneh Lind, Mads V. Kristensen, Mette De Roo, Niels Jacobs, Doris M. Van Duynhoven, John Cannet, Claire Fang, Fang Humpfer, Eberhard Schäfer, Hartmut Spraul, Manfred Engelsen, Søren B. Smilde, Age K. Article/Letter to editor Analytical Chemistry 89 (2017) 15 ISSN: 0003-2700 Toward Reliable Lipoprotein Particle Predictions from NMR Spectra of Human Blood : An Interlaboratory Ring Test 2017 Lipoprotein profiling of human blood by 1H nuclear magnetic resonance (NMR) spectroscopy is a rapid and promising approach to monitor health and disease states in medicine and nutrition. However, lack of standardization of measurement protocols has prevented the use of NMR-based lipoprotein profiling in metastudies. In this study, a standardized NMR measurement protocol was applied in a ring test performed across three different laboratories in Europe on plasma and serum samples from 28 individuals. Data was evaluated in terms of (i) spectral differences, (ii) differences in LPD predictions obtained using an existing prediction model, and (iii) agreement of predictions with cholesterol concentrations in high- and low-density lipoproteins (HDL and LDL) particles measured by standardized clinical assays. ANOVA-simultaneous component analysis (ASCA) of the ring test spectral ensemble that contains methylene and methyl peaks (1.4-0.6 ppm) showed that 97.99% of the variance in the data is related to subject, 1.62% to sample type (serum or plasma), and 0.39% to laboratory. This interlaboratory variation is in fact smaller than the maximum acceptable intralaboratory variation on quality control samples. It is also shown that the reproducibility between laboratories is good enough for the LPD predictions to be exchangeable when the standardized NMR measurement protocol is followed. With the successful implementation of this protocol, which results in reproducible prediction of lipoprotein distributions across laboratories, a step is taken toward bringing NMR more into scope of prognostic and diagnostic biomarkers, reducing the need for less efficient methods such as ultracentrifugation or high-performance liquid chromatography (HPLC). en application/pdf https://research.wur.nl/en/publications/toward-reliable-lipoprotein-particle-predictions-from-nmr-spectra 10.1021/acs.analchem.7b01329 https://edepot.wur.nl/421223 Life Science https://creativecommons.org/licenses/by-nc-nd/4.0/ Wageningen University & Research
institution WUR NL
collection DSpace
country Países bajos
countrycode NL
component Bibliográfico
access En linea
databasecode dig-wur-nl
tag biblioteca
region Europa del Oeste
libraryname WUR Library Netherlands
language English
topic Life Science
Life Science
spellingShingle Life Science
Life Science
Monsonis Centelles, Sandra
Hoefsloot, Huub C.J.
Khakimov, Bekzod
Ebrahimi, Parvaneh
Lind, Mads V.
Kristensen, Mette
De Roo, Niels
Jacobs, Doris M.
Van Duynhoven, John
Cannet, Claire
Fang, Fang
Humpfer, Eberhard
Schäfer, Hartmut
Spraul, Manfred
Engelsen, Søren B.
Smilde, Age K.
Toward Reliable Lipoprotein Particle Predictions from NMR Spectra of Human Blood : An Interlaboratory Ring Test
description Lipoprotein profiling of human blood by 1H nuclear magnetic resonance (NMR) spectroscopy is a rapid and promising approach to monitor health and disease states in medicine and nutrition. However, lack of standardization of measurement protocols has prevented the use of NMR-based lipoprotein profiling in metastudies. In this study, a standardized NMR measurement protocol was applied in a ring test performed across three different laboratories in Europe on plasma and serum samples from 28 individuals. Data was evaluated in terms of (i) spectral differences, (ii) differences in LPD predictions obtained using an existing prediction model, and (iii) agreement of predictions with cholesterol concentrations in high- and low-density lipoproteins (HDL and LDL) particles measured by standardized clinical assays. ANOVA-simultaneous component analysis (ASCA) of the ring test spectral ensemble that contains methylene and methyl peaks (1.4-0.6 ppm) showed that 97.99% of the variance in the data is related to subject, 1.62% to sample type (serum or plasma), and 0.39% to laboratory. This interlaboratory variation is in fact smaller than the maximum acceptable intralaboratory variation on quality control samples. It is also shown that the reproducibility between laboratories is good enough for the LPD predictions to be exchangeable when the standardized NMR measurement protocol is followed. With the successful implementation of this protocol, which results in reproducible prediction of lipoprotein distributions across laboratories, a step is taken toward bringing NMR more into scope of prognostic and diagnostic biomarkers, reducing the need for less efficient methods such as ultracentrifugation or high-performance liquid chromatography (HPLC).
format Article/Letter to editor
topic_facet Life Science
author Monsonis Centelles, Sandra
Hoefsloot, Huub C.J.
Khakimov, Bekzod
Ebrahimi, Parvaneh
Lind, Mads V.
Kristensen, Mette
De Roo, Niels
Jacobs, Doris M.
Van Duynhoven, John
Cannet, Claire
Fang, Fang
Humpfer, Eberhard
Schäfer, Hartmut
Spraul, Manfred
Engelsen, Søren B.
Smilde, Age K.
author_facet Monsonis Centelles, Sandra
Hoefsloot, Huub C.J.
Khakimov, Bekzod
Ebrahimi, Parvaneh
Lind, Mads V.
Kristensen, Mette
De Roo, Niels
Jacobs, Doris M.
Van Duynhoven, John
Cannet, Claire
Fang, Fang
Humpfer, Eberhard
Schäfer, Hartmut
Spraul, Manfred
Engelsen, Søren B.
Smilde, Age K.
author_sort Monsonis Centelles, Sandra
title Toward Reliable Lipoprotein Particle Predictions from NMR Spectra of Human Blood : An Interlaboratory Ring Test
title_short Toward Reliable Lipoprotein Particle Predictions from NMR Spectra of Human Blood : An Interlaboratory Ring Test
title_full Toward Reliable Lipoprotein Particle Predictions from NMR Spectra of Human Blood : An Interlaboratory Ring Test
title_fullStr Toward Reliable Lipoprotein Particle Predictions from NMR Spectra of Human Blood : An Interlaboratory Ring Test
title_full_unstemmed Toward Reliable Lipoprotein Particle Predictions from NMR Spectra of Human Blood : An Interlaboratory Ring Test
title_sort toward reliable lipoprotein particle predictions from nmr spectra of human blood : an interlaboratory ring test
url https://research.wur.nl/en/publications/toward-reliable-lipoprotein-particle-predictions-from-nmr-spectra
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