Consequences of geographical habitats on population structure and genetic diversity in Campanula spp.

¿Characterization of populations by means of DNA techniques provides a tool for precise identification and a quantitative estimate of genetic diversity, crucial in evaluation of genetic fragmentation within and among populations. NBS profiling are PCR-based approaches that sample genetic variation in resistance genes (R-gene), and R gene analogs (RGA). To date, myb patterns have not been used for evaluating genetic diversity in other species. NBS primers are homologous to the conserved sequences in the Nucleotide-Binding-Site of the NBS-LRR class of R-genes. A total of 12 populations from five Campanula species (C. barbata L., C. latifolia L., C. rapunculoides L., C. spicata L. and C. trachelium L.), autochthonous of the West Italian Alps, were genotyped via nucleotide-binding site (NBS) and myb gene profiling. The selected markers produced a total of 361 bands, showing high levels of polymorphism. Genetic diversity among and within species and population structure was evaluated by different statistical analyses performed using TREECON software, Mantel Nonparametric Test, NTSYS package, AMOVA and STRUCTURE. The correlation between genetic variability and geographical location suggests that the five Campanula species have been subjected to long-term evolutionary processes consistent with the natural fragmentation of continuous mountains areas.

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Bibliographic Details
Main Authors: Caser, M., Scariot, V., Arens, P.
Format: Article/Letter to editor biblioteca
Language:English
Subjects:Campanula, Genetic typing, Myb profiling, NBS profiling,
Online Access:https://research.wur.nl/en/publications/consequences-of-geographical-habitats-on-population-structure-and
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spelling dig-wur-nl-wurpubs-4097452025-01-22 Caser, M. Scariot, V. Arens, P. Article/Letter to editor International Journal of Plant Biology 1 (2010) 1 ISSN: 2037-0156 Consequences of geographical habitats on population structure and genetic diversity in Campanula spp. 2010 ¿Characterization of populations by means of DNA techniques provides a tool for precise identification and a quantitative estimate of genetic diversity, crucial in evaluation of genetic fragmentation within and among populations. NBS profiling are PCR-based approaches that sample genetic variation in resistance genes (R-gene), and R gene analogs (RGA). To date, myb patterns have not been used for evaluating genetic diversity in other species. NBS primers are homologous to the conserved sequences in the Nucleotide-Binding-Site of the NBS-LRR class of R-genes. A total of 12 populations from five Campanula species (C. barbata L., C. latifolia L., C. rapunculoides L., C. spicata L. and C. trachelium L.), autochthonous of the West Italian Alps, were genotyped via nucleotide-binding site (NBS) and myb gene profiling. The selected markers produced a total of 361 bands, showing high levels of polymorphism. Genetic diversity among and within species and population structure was evaluated by different statistical analyses performed using TREECON software, Mantel Nonparametric Test, NTSYS package, AMOVA and STRUCTURE. The correlation between genetic variability and geographical location suggests that the five Campanula species have been subjected to long-term evolutionary processes consistent with the natural fragmentation of continuous mountains areas. en application/pdf https://research.wur.nl/en/publications/consequences-of-geographical-habitats-on-population-structure-and 10.4081/pb.2010.e5 https://edepot.wur.nl/178644 Campanula Genetic typing Myb profiling NBS profiling Wageningen University & Research
institution WUR NL
collection DSpace
country Países bajos
countrycode NL
component Bibliográfico
access En linea
databasecode dig-wur-nl
tag biblioteca
region Europa del Oeste
libraryname WUR Library Netherlands
language English
topic Campanula
Genetic typing
Myb profiling
NBS profiling
Campanula
Genetic typing
Myb profiling
NBS profiling
spellingShingle Campanula
Genetic typing
Myb profiling
NBS profiling
Campanula
Genetic typing
Myb profiling
NBS profiling
Caser, M.
Scariot, V.
Arens, P.
Consequences of geographical habitats on population structure and genetic diversity in Campanula spp.
description ¿Characterization of populations by means of DNA techniques provides a tool for precise identification and a quantitative estimate of genetic diversity, crucial in evaluation of genetic fragmentation within and among populations. NBS profiling are PCR-based approaches that sample genetic variation in resistance genes (R-gene), and R gene analogs (RGA). To date, myb patterns have not been used for evaluating genetic diversity in other species. NBS primers are homologous to the conserved sequences in the Nucleotide-Binding-Site of the NBS-LRR class of R-genes. A total of 12 populations from five Campanula species (C. barbata L., C. latifolia L., C. rapunculoides L., C. spicata L. and C. trachelium L.), autochthonous of the West Italian Alps, were genotyped via nucleotide-binding site (NBS) and myb gene profiling. The selected markers produced a total of 361 bands, showing high levels of polymorphism. Genetic diversity among and within species and population structure was evaluated by different statistical analyses performed using TREECON software, Mantel Nonparametric Test, NTSYS package, AMOVA and STRUCTURE. The correlation between genetic variability and geographical location suggests that the five Campanula species have been subjected to long-term evolutionary processes consistent with the natural fragmentation of continuous mountains areas.
format Article/Letter to editor
topic_facet Campanula
Genetic typing
Myb profiling
NBS profiling
author Caser, M.
Scariot, V.
Arens, P.
author_facet Caser, M.
Scariot, V.
Arens, P.
author_sort Caser, M.
title Consequences of geographical habitats on population structure and genetic diversity in Campanula spp.
title_short Consequences of geographical habitats on population structure and genetic diversity in Campanula spp.
title_full Consequences of geographical habitats on population structure and genetic diversity in Campanula spp.
title_fullStr Consequences of geographical habitats on population structure and genetic diversity in Campanula spp.
title_full_unstemmed Consequences of geographical habitats on population structure and genetic diversity in Campanula spp.
title_sort consequences of geographical habitats on population structure and genetic diversity in campanula spp.
url https://research.wur.nl/en/publications/consequences-of-geographical-habitats-on-population-structure-and
work_keys_str_mv AT caserm consequencesofgeographicalhabitatsonpopulationstructureandgeneticdiversityincampanulaspp
AT scariotv consequencesofgeographicalhabitatsonpopulationstructureandgeneticdiversityincampanulaspp
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