Global analysis of autocorrelation functions and photon counting distributions

In fluorescence correlation spectroscopy (FCS) and photon counting histogram (PCH) analysis the same experimental fluorescence intensity fluctuations are used, but each analytical method focuses on a different property of the signal. The time-dependent decay of the correlation of fluorescence fluctuations is measured in FCS yielding, for instance, molecular diffusion coefficients. The amplitude distribution of these fluctuations is calculated by PCH yielding the molecular brightness. Both FCS and PCH give information about the molecular concentration. Here we describe a global analysis protocol that simultaneously recovers relevant and common parameters in model functions of FCS and PCH from a single fluorescence fluctuation trace. The global analysis approach is described and tested with experimental fluorescence fluctuation data of enhanced green-fluorescent protein (eGFP) and dimeric eGFP (two eGFP molecules connected by a six amino acid long linker) in aqueous buffer. Brightness values and diffusion constants are recovered with good precision elucidating novel excited-state and motional properties of both proteins

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Bibliographic Details
Main Authors: Skakun, V.V., Engel, R., Digris, A.V., Borst, J.W., Visser, A.J.W.G.
Format: Article/Letter to editor biblioteca
Language:English
Subjects:Fluorescence Correlation Spectroscopy, Fluorescence Fluctuation Spectroscopy, Fluorescence Intensity Distribution Analysis, Global Analysis, Green Fluorescent Protein, Photon Counting Histogram,
Online Access:https://research.wur.nl/en/publications/global-analysis-of-autocorrelation-functions-and-photon-counting-
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spelling dig-wur-nl-wurpubs-4008852024-12-04 Skakun, V.V. Engel, R. Digris, A.V. Borst, J.W. Visser, A.J.W.G. Article/Letter to editor Frontiers in Bioscience (Elite Edition) 16 (2011) 3 ISSN: 1945-0494 Global analysis of autocorrelation functions and photon counting distributions 2011 In fluorescence correlation spectroscopy (FCS) and photon counting histogram (PCH) analysis the same experimental fluorescence intensity fluctuations are used, but each analytical method focuses on a different property of the signal. The time-dependent decay of the correlation of fluorescence fluctuations is measured in FCS yielding, for instance, molecular diffusion coefficients. The amplitude distribution of these fluctuations is calculated by PCH yielding the molecular brightness. Both FCS and PCH give information about the molecular concentration. Here we describe a global analysis protocol that simultaneously recovers relevant and common parameters in model functions of FCS and PCH from a single fluorescence fluctuation trace. The global analysis approach is described and tested with experimental fluorescence fluctuation data of enhanced green-fluorescent protein (eGFP) and dimeric eGFP (two eGFP molecules connected by a six amino acid long linker) in aqueous buffer. Brightness values and diffusion constants are recovered with good precision elucidating novel excited-state and motional properties of both proteins en text/html https://research.wur.nl/en/publications/global-analysis-of-autocorrelation-functions-and-photon-counting- 10.2741/e264 https://edepot.wur.nl/160404 Fluorescence Correlation Spectroscopy Fluorescence Fluctuation Spectroscopy Fluorescence Intensity Distribution Analysis Global Analysis Green Fluorescent Protein Photon Counting Histogram Wageningen University & Research
institution WUR NL
collection DSpace
country Países bajos
countrycode NL
component Bibliográfico
access En linea
databasecode dig-wur-nl
tag biblioteca
region Europa del Oeste
libraryname WUR Library Netherlands
language English
topic Fluorescence Correlation Spectroscopy
Fluorescence Fluctuation Spectroscopy
Fluorescence Intensity Distribution Analysis
Global Analysis
Green Fluorescent Protein
Photon Counting Histogram
Fluorescence Correlation Spectroscopy
Fluorescence Fluctuation Spectroscopy
Fluorescence Intensity Distribution Analysis
Global Analysis
Green Fluorescent Protein
Photon Counting Histogram
spellingShingle Fluorescence Correlation Spectroscopy
Fluorescence Fluctuation Spectroscopy
Fluorescence Intensity Distribution Analysis
Global Analysis
Green Fluorescent Protein
Photon Counting Histogram
Fluorescence Correlation Spectroscopy
Fluorescence Fluctuation Spectroscopy
Fluorescence Intensity Distribution Analysis
Global Analysis
Green Fluorescent Protein
Photon Counting Histogram
Skakun, V.V.
Engel, R.
Digris, A.V.
Borst, J.W.
Visser, A.J.W.G.
Global analysis of autocorrelation functions and photon counting distributions
description In fluorescence correlation spectroscopy (FCS) and photon counting histogram (PCH) analysis the same experimental fluorescence intensity fluctuations are used, but each analytical method focuses on a different property of the signal. The time-dependent decay of the correlation of fluorescence fluctuations is measured in FCS yielding, for instance, molecular diffusion coefficients. The amplitude distribution of these fluctuations is calculated by PCH yielding the molecular brightness. Both FCS and PCH give information about the molecular concentration. Here we describe a global analysis protocol that simultaneously recovers relevant and common parameters in model functions of FCS and PCH from a single fluorescence fluctuation trace. The global analysis approach is described and tested with experimental fluorescence fluctuation data of enhanced green-fluorescent protein (eGFP) and dimeric eGFP (two eGFP molecules connected by a six amino acid long linker) in aqueous buffer. Brightness values and diffusion constants are recovered with good precision elucidating novel excited-state and motional properties of both proteins
format Article/Letter to editor
topic_facet Fluorescence Correlation Spectroscopy
Fluorescence Fluctuation Spectroscopy
Fluorescence Intensity Distribution Analysis
Global Analysis
Green Fluorescent Protein
Photon Counting Histogram
author Skakun, V.V.
Engel, R.
Digris, A.V.
Borst, J.W.
Visser, A.J.W.G.
author_facet Skakun, V.V.
Engel, R.
Digris, A.V.
Borst, J.W.
Visser, A.J.W.G.
author_sort Skakun, V.V.
title Global analysis of autocorrelation functions and photon counting distributions
title_short Global analysis of autocorrelation functions and photon counting distributions
title_full Global analysis of autocorrelation functions and photon counting distributions
title_fullStr Global analysis of autocorrelation functions and photon counting distributions
title_full_unstemmed Global analysis of autocorrelation functions and photon counting distributions
title_sort global analysis of autocorrelation functions and photon counting distributions
url https://research.wur.nl/en/publications/global-analysis-of-autocorrelation-functions-and-photon-counting-
work_keys_str_mv AT skakunvv globalanalysisofautocorrelationfunctionsandphotoncountingdistributions
AT engelr globalanalysisofautocorrelationfunctionsandphotoncountingdistributions
AT digrisav globalanalysisofautocorrelationfunctionsandphotoncountingdistributions
AT borstjw globalanalysisofautocorrelationfunctionsandphotoncountingdistributions
AT visserajwg globalanalysisofautocorrelationfunctionsandphotoncountingdistributions
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