Microsatellite analysis of Damask rose (Rosa damascena Mill.) accessions from various regions in Iran reveals multiple genotypes

Background - Damask roses (Rosa damascena Mill.) are mainly used for essential oil production. Previous studies have indicated that all production material in Bulgaria and Turkey consists of only one genotype. Nine polymorphic microsatellite markers were used to analyze the genetic diversity of 40 accessions of R. damascena collected across major and minor rose oil production areas in Iran. Results - All microsatellite markers showed a high level of polymorphism (5-15 alleles per microsatellite marker, with an average of 9.11 alleles per locus). Cluster analysis of genetic similarities revealed that these microsatellites identified a total of nine different genotypes. The genotype from Isfahan province, which is the major production area, was by far the most common genotype (27/40 accessions). It was identical to the Bulgarian genotype. Other genotypes (each represented by 1-4 accessions) were collected from minor production areas in several provinces, notably in the mountainous Northwest of Iran. Conclusions - This is the first study that uncovered genetic diversity within Damask rose. Our results will guide new collection activities to establish larger collections and manage the Iranian Damask rose genetic resources. The genotypes identified here may be directly useful for breeding.

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Main Authors: Babaei, A., Tabaei-Aghdaei, S.R., Khosh-Khui, M., Omidbaigi, R., Naghavi, M.R., Esselink, G.D., Smulders, M.J.M.
Format: Article/Letter to editor biblioteca
Language:English
Subjects:aflp, antioxidant, configuration, dna, genetic diversity, markers, oil, turkey,
Online Access:https://research.wur.nl/en/publications/microsatellite-analysis-of-damask-rose-rosa-damascena-mill-access
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spelling dig-wur-nl-wurpubs-3536702024-08-19 Babaei, A. Tabaei-Aghdaei, S.R. Khosh-Khui, M. Omidbaigi, R. Naghavi, M.R. Esselink, G.D. Smulders, M.J.M. Article/Letter to editor BMC Plant Biology 7 (2007) ISSN: 1471-2229 Microsatellite analysis of Damask rose (Rosa damascena Mill.) accessions from various regions in Iran reveals multiple genotypes 2007 Background - Damask roses (Rosa damascena Mill.) are mainly used for essential oil production. Previous studies have indicated that all production material in Bulgaria and Turkey consists of only one genotype. Nine polymorphic microsatellite markers were used to analyze the genetic diversity of 40 accessions of R. damascena collected across major and minor rose oil production areas in Iran. Results - All microsatellite markers showed a high level of polymorphism (5-15 alleles per microsatellite marker, with an average of 9.11 alleles per locus). Cluster analysis of genetic similarities revealed that these microsatellites identified a total of nine different genotypes. The genotype from Isfahan province, which is the major production area, was by far the most common genotype (27/40 accessions). It was identical to the Bulgarian genotype. Other genotypes (each represented by 1-4 accessions) were collected from minor production areas in several provinces, notably in the mountainous Northwest of Iran. Conclusions - This is the first study that uncovered genetic diversity within Damask rose. Our results will guide new collection activities to establish larger collections and manage the Iranian Damask rose genetic resources. The genotypes identified here may be directly useful for breeding. en application/pdf https://research.wur.nl/en/publications/microsatellite-analysis-of-damask-rose-rosa-damascena-mill-access 10.1186/1471-2229-7-12 https://edepot.wur.nl/23068 aflp antioxidant configuration dna genetic diversity markers oil turkey Wageningen University & Research
institution WUR NL
collection DSpace
country Países bajos
countrycode NL
component Bibliográfico
access En linea
databasecode dig-wur-nl
tag biblioteca
region Europa del Oeste
libraryname WUR Library Netherlands
language English
topic aflp
antioxidant
configuration
dna
genetic diversity
markers
oil
turkey
aflp
antioxidant
configuration
dna
genetic diversity
markers
oil
turkey
spellingShingle aflp
antioxidant
configuration
dna
genetic diversity
markers
oil
turkey
aflp
antioxidant
configuration
dna
genetic diversity
markers
oil
turkey
Babaei, A.
Tabaei-Aghdaei, S.R.
Khosh-Khui, M.
Omidbaigi, R.
Naghavi, M.R.
Esselink, G.D.
Smulders, M.J.M.
Microsatellite analysis of Damask rose (Rosa damascena Mill.) accessions from various regions in Iran reveals multiple genotypes
description Background - Damask roses (Rosa damascena Mill.) are mainly used for essential oil production. Previous studies have indicated that all production material in Bulgaria and Turkey consists of only one genotype. Nine polymorphic microsatellite markers were used to analyze the genetic diversity of 40 accessions of R. damascena collected across major and minor rose oil production areas in Iran. Results - All microsatellite markers showed a high level of polymorphism (5-15 alleles per microsatellite marker, with an average of 9.11 alleles per locus). Cluster analysis of genetic similarities revealed that these microsatellites identified a total of nine different genotypes. The genotype from Isfahan province, which is the major production area, was by far the most common genotype (27/40 accessions). It was identical to the Bulgarian genotype. Other genotypes (each represented by 1-4 accessions) were collected from minor production areas in several provinces, notably in the mountainous Northwest of Iran. Conclusions - This is the first study that uncovered genetic diversity within Damask rose. Our results will guide new collection activities to establish larger collections and manage the Iranian Damask rose genetic resources. The genotypes identified here may be directly useful for breeding.
format Article/Letter to editor
topic_facet aflp
antioxidant
configuration
dna
genetic diversity
markers
oil
turkey
author Babaei, A.
Tabaei-Aghdaei, S.R.
Khosh-Khui, M.
Omidbaigi, R.
Naghavi, M.R.
Esselink, G.D.
Smulders, M.J.M.
author_facet Babaei, A.
Tabaei-Aghdaei, S.R.
Khosh-Khui, M.
Omidbaigi, R.
Naghavi, M.R.
Esselink, G.D.
Smulders, M.J.M.
author_sort Babaei, A.
title Microsatellite analysis of Damask rose (Rosa damascena Mill.) accessions from various regions in Iran reveals multiple genotypes
title_short Microsatellite analysis of Damask rose (Rosa damascena Mill.) accessions from various regions in Iran reveals multiple genotypes
title_full Microsatellite analysis of Damask rose (Rosa damascena Mill.) accessions from various regions in Iran reveals multiple genotypes
title_fullStr Microsatellite analysis of Damask rose (Rosa damascena Mill.) accessions from various regions in Iran reveals multiple genotypes
title_full_unstemmed Microsatellite analysis of Damask rose (Rosa damascena Mill.) accessions from various regions in Iran reveals multiple genotypes
title_sort microsatellite analysis of damask rose (rosa damascena mill.) accessions from various regions in iran reveals multiple genotypes
url https://research.wur.nl/en/publications/microsatellite-analysis-of-damask-rose-rosa-damascena-mill-access
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AT tabaeiaghdaeisr microsatelliteanalysisofdamaskroserosadamascenamillaccessionsfromvariousregionsiniranrevealsmultiplegenotypes
AT khoshkhuim microsatelliteanalysisofdamaskroserosadamascenamillaccessionsfromvariousregionsiniranrevealsmultiplegenotypes
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AT esselinkgd microsatelliteanalysisofdamaskroserosadamascenamillaccessionsfromvariousregionsiniranrevealsmultiplegenotypes
AT smuldersmjm microsatelliteanalysisofdamaskroserosadamascenamillaccessionsfromvariousregionsiniranrevealsmultiplegenotypes
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