A new virus infecting Myzus persicae has a genome organization similar to the species of the genus Densovirus

The genomic sequence of a new icosahedral DNA virus infecting Myzus persicae has been determined. Analysis of 5499 nt of the viral genome revealed five open reading frames (ORFs) evenly distributed in the 5' half of both DNA strands. Three ORFs (ORF1-3) share the same strand, while two other ORFs (ORF4 and ORF5) are detected in the complementary sequence. The overall genomic organization is similar to that of species from the genus Densovirus. ORFs 1-3 most likely encode the non-structural proteins, since their putative products contain conserved replication motifs, NTP-binding domains and helicase domains similar to those found in the NS-1 protein of parvoviruses. The deduced amino acid sequences from ORFs 4 and 5 show sequence similarities with the structural proteins of the members of the genus Densovirus. These data indicate that this virus is a new species of the genus Densovirus in the family Parvoviridae. The virus was tentatively named Myzus persicae densovirus. The nucleotide sequence reported in this study appears in the EMBL, GenBank and DDBJ nucleotide sequence databases under accession number AY148187.

Saved in:
Bibliographic Details
Main Authors: van Munster, M., Dullemans, A.M., Verbeek, M., van den Heuvel, J.F.J.M., Reinbold, C., Brault, V., Clérivet, A., van der Wilk, F.
Format: Article/Letter to editor biblioteca
Language:English
Subjects:alignment, complete nucleotide-sequence, densonucleosis virus, dna, expression, initiator, parvoviruses, periplaneta-fuliginosa, replication, transcription,
Online Access:https://research.wur.nl/en/publications/a-new-virus-infecting-myzus-persicae-has-a-genome-organization-si
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-wur-nl-wurpubs-339578
record_format koha
spelling dig-wur-nl-wurpubs-3395782024-03-07 van Munster, M. Dullemans, A.M. Verbeek, M. van den Heuvel, J.F.J.M. Reinbold, C. Brault, V. Clérivet, A. van der Wilk, F. Article/Letter to editor Journal of General Virology 84 (2003) ISSN: 0022-1317 A new virus infecting Myzus persicae has a genome organization similar to the species of the genus Densovirus 2003 The genomic sequence of a new icosahedral DNA virus infecting Myzus persicae has been determined. Analysis of 5499 nt of the viral genome revealed five open reading frames (ORFs) evenly distributed in the 5' half of both DNA strands. Three ORFs (ORF1-3) share the same strand, while two other ORFs (ORF4 and ORF5) are detected in the complementary sequence. The overall genomic organization is similar to that of species from the genus Densovirus. ORFs 1-3 most likely encode the non-structural proteins, since their putative products contain conserved replication motifs, NTP-binding domains and helicase domains similar to those found in the NS-1 protein of parvoviruses. The deduced amino acid sequences from ORFs 4 and 5 show sequence similarities with the structural proteins of the members of the genus Densovirus. These data indicate that this virus is a new species of the genus Densovirus in the family Parvoviridae. The virus was tentatively named Myzus persicae densovirus. The nucleotide sequence reported in this study appears in the EMBL, GenBank and DDBJ nucleotide sequence databases under accession number AY148187. en application/pdf https://research.wur.nl/en/publications/a-new-virus-infecting-myzus-persicae-has-a-genome-organization-si 10.1099/vir.0.18650-0 https://edepot.wur.nl/20728 alignment complete nucleotide-sequence densonucleosis virus dna expression initiator parvoviruses periplaneta-fuliginosa replication transcription Wageningen University & Research
institution WUR NL
collection DSpace
country Países bajos
countrycode NL
component Bibliográfico
access En linea
databasecode dig-wur-nl
tag biblioteca
region Europa del Oeste
libraryname WUR Library Netherlands
language English
topic alignment
complete nucleotide-sequence
densonucleosis virus
dna
expression
initiator
parvoviruses
periplaneta-fuliginosa
replication
transcription
alignment
complete nucleotide-sequence
densonucleosis virus
dna
expression
initiator
parvoviruses
periplaneta-fuliginosa
replication
transcription
spellingShingle alignment
complete nucleotide-sequence
densonucleosis virus
dna
expression
initiator
parvoviruses
periplaneta-fuliginosa
replication
transcription
alignment
complete nucleotide-sequence
densonucleosis virus
dna
expression
initiator
parvoviruses
periplaneta-fuliginosa
replication
transcription
van Munster, M.
Dullemans, A.M.
Verbeek, M.
van den Heuvel, J.F.J.M.
Reinbold, C.
Brault, V.
Clérivet, A.
van der Wilk, F.
A new virus infecting Myzus persicae has a genome organization similar to the species of the genus Densovirus
description The genomic sequence of a new icosahedral DNA virus infecting Myzus persicae has been determined. Analysis of 5499 nt of the viral genome revealed five open reading frames (ORFs) evenly distributed in the 5' half of both DNA strands. Three ORFs (ORF1-3) share the same strand, while two other ORFs (ORF4 and ORF5) are detected in the complementary sequence. The overall genomic organization is similar to that of species from the genus Densovirus. ORFs 1-3 most likely encode the non-structural proteins, since their putative products contain conserved replication motifs, NTP-binding domains and helicase domains similar to those found in the NS-1 protein of parvoviruses. The deduced amino acid sequences from ORFs 4 and 5 show sequence similarities with the structural proteins of the members of the genus Densovirus. These data indicate that this virus is a new species of the genus Densovirus in the family Parvoviridae. The virus was tentatively named Myzus persicae densovirus. The nucleotide sequence reported in this study appears in the EMBL, GenBank and DDBJ nucleotide sequence databases under accession number AY148187.
format Article/Letter to editor
topic_facet alignment
complete nucleotide-sequence
densonucleosis virus
dna
expression
initiator
parvoviruses
periplaneta-fuliginosa
replication
transcription
author van Munster, M.
Dullemans, A.M.
Verbeek, M.
van den Heuvel, J.F.J.M.
Reinbold, C.
Brault, V.
Clérivet, A.
van der Wilk, F.
author_facet van Munster, M.
Dullemans, A.M.
Verbeek, M.
van den Heuvel, J.F.J.M.
Reinbold, C.
Brault, V.
Clérivet, A.
van der Wilk, F.
author_sort van Munster, M.
title A new virus infecting Myzus persicae has a genome organization similar to the species of the genus Densovirus
title_short A new virus infecting Myzus persicae has a genome organization similar to the species of the genus Densovirus
title_full A new virus infecting Myzus persicae has a genome organization similar to the species of the genus Densovirus
title_fullStr A new virus infecting Myzus persicae has a genome organization similar to the species of the genus Densovirus
title_full_unstemmed A new virus infecting Myzus persicae has a genome organization similar to the species of the genus Densovirus
title_sort new virus infecting myzus persicae has a genome organization similar to the species of the genus densovirus
url https://research.wur.nl/en/publications/a-new-virus-infecting-myzus-persicae-has-a-genome-organization-si
work_keys_str_mv AT vanmunsterm anewvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT dullemansam anewvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT verbeekm anewvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT vandenheuveljfjm anewvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT reinboldc anewvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT braultv anewvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT cleriveta anewvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT vanderwilkf anewvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT vanmunsterm newvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT dullemansam newvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT verbeekm newvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT vandenheuveljfjm newvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT reinboldc newvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT braultv newvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT cleriveta newvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
AT vanderwilkf newvirusinfectingmyzuspersicaehasagenomeorganizationsimilartothespeciesofthegenusdensovirus
_version_ 1813209255198588928