Evaluation of genotypic correlations of nitrogen-fixing bacteria in common beans (Phaseolus vulgaris L.).

The common bean (Phaseolus vulgaris L.) is a pulse and legume of significant agronomic importance because of its high nutritive values and ability to fix atmospheric nitrogen. It is grown across the world in America, Australia, Europe, the Middle East, Asia and Africa. In this research, a greenhouse experiment was conducted to evaluate the genotypic correlations of nitrogen-fixing bacteria (Rhizobium) in common beans. The red common bean Chirripo variety was used with seven treatments with five replicates of each: two with Bradyrhizobium japonicum, two with Rhizobium sp., one soil treatment, one substrate treatment receiving nitrogen and the control, which was only substrate. Six bacteria isolates were made and amplified by polymerase chain reaction (PCR). The 16S rRNA sequence were used to identify the isolated Rhizobia and assess their evolutionary relationship. The results obtained showed that the inoculum we had as Bradyrhizobium japonicum was actually Bradyrhizobium sp. It had excellent results, producing big and red nodules. Rhizobium sp. produced small nodules but effectively fixed nitrogen. In addition, the soils from the EARTH University Organic Farm produced nodules, though in smaller quantities. Thus, Bradyrhizobium sp. can be a successful alternative strain for common bean inoculation. The obtained phylogenetic results of the 16S rRNA show that the isolated Rhizobia were closely related to the genus Rhizobium, which is known for forming the symbiotic relationship with common beans: Rhizobium sp., Rhizobium tropici, and Bradyrhizobium sp. Common beans proved to be promiscuous (multi-host plant).

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Bibliographic Details
Main Authors: Shareka, Forget, Dilbato, Lidia
Other Authors: Tamayo, Ana Cristina
Format: info:eu-repo/semantics/bachelorThesis biblioteca
Language:eng
Published: Universidad EARTH 2019-12
Subjects:PHASEOLUS VULGARIS, FRIJOL (PHASEOLUS), BACTERIAS FIJADORAS DE NITROGENO, BRADYRHIZOBIUM JAPONICUM, RHIZOBIUM, https://purl.org/pe-repo/ocde/ford#4.01.01,
Online Access:https://repositorio.earth.ac.cr/handle/UEARTH/441
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spelling dig-uearth-cr-UEARTH-4412022-12-07T02:00:28Z Evaluation of genotypic correlations of nitrogen-fixing bacteria in common beans (Phaseolus vulgaris L.). Shareka, Forget Dilbato, Lidia Tamayo, Ana Cristina McLeod, Kent D. PHASEOLUS VULGARIS FRIJOL (PHASEOLUS) BACTERIAS FIJADORAS DE NITROGENO BRADYRHIZOBIUM JAPONICUM RHIZOBIUM https://purl.org/pe-repo/ocde/ford#4.01.01 The common bean (Phaseolus vulgaris L.) is a pulse and legume of significant agronomic importance because of its high nutritive values and ability to fix atmospheric nitrogen. It is grown across the world in America, Australia, Europe, the Middle East, Asia and Africa. In this research, a greenhouse experiment was conducted to evaluate the genotypic correlations of nitrogen-fixing bacteria (Rhizobium) in common beans. The red common bean Chirripo variety was used with seven treatments with five replicates of each: two with Bradyrhizobium japonicum, two with Rhizobium sp., one soil treatment, one substrate treatment receiving nitrogen and the control, which was only substrate. Six bacteria isolates were made and amplified by polymerase chain reaction (PCR). The 16S rRNA sequence were used to identify the isolated Rhizobia and assess their evolutionary relationship. The results obtained showed that the inoculum we had as Bradyrhizobium japonicum was actually Bradyrhizobium sp. It had excellent results, producing big and red nodules. Rhizobium sp. produced small nodules but effectively fixed nitrogen. In addition, the soils from the EARTH University Organic Farm produced nodules, though in smaller quantities. Thus, Bradyrhizobium sp. can be a successful alternative strain for common bean inoculation. The obtained phylogenetic results of the 16S rRNA show that the isolated Rhizobia were closely related to the genus Rhizobium, which is known for forming the symbiotic relationship with common beans: Rhizobium sp., Rhizobium tropici, and Bradyrhizobium sp. Common beans proved to be promiscuous (multi-host plant). El frijol común (Phaseolus vulgaris L.) es una leguminosa de gran importancia agronómica debido a sus altos valores nutritivos y su capacidad para fijar el Nitrógeno atmosférico. Se cultiva en todo el mundo en América, Australia, Europa, Medio Oriente, Asia y África. En esta investigación, se realizó un experimento en invernadero para evaluar las correlaciones genotípicas de las bacterias fijadoras de nitrógeno (Rhizobium) en frijoles comunes. Se usó la variedad Chirripó de frijol rojo común, con siete tratamientos y con cinco repeticiones cada uno; dos de Bradyrhizobium japonicum, dos Rhizobium sp., un tratamiento de suelo, un tratamiento de sustrato que recibió Nitrógeno y el control que fue solo sustrato. Se hicieron seis aislamientos de bacterias, amplificados por reacción en cadena de la polimerasa (PCR). La secuencia de 16S rRNA se utilizó para identificar el Rhizobia aislado y evaluar su relación evolutiva. Los resultados obtenidos muestran que el inóculo que teníamos como Bradyrhizobium japonicum era en realidad Bradyrhizobium sp., el cual tuvo excelentes resultados; presentando nódulos grandes y rojos. Rhizobium sp. produjo pequeños nódulos pero fijó efectivamente el Nitrógeno. Además, los suelos de la Finca Orgánica de la Universidad EARTH produjeron nódulos, aunque en cantidades más pequeñas. Por lo tanto, Bradyrhizobium sp. puede ser una cepa alternativa exitosa para la inoculación de frijoles comunes. Los resultados filogenéticos del 16S rRNA obtenido muestran que los Rhizobia aislados estaban estrechamente relacionados con el género Rhizobium, conocido por formar la relación simbiótica con los frijoles comunes: Rhizobium sp., Rhizobium tropici. El frijol común resultó multi hospedante de las bacterias fijadoras de Nitrógeno. Trabajo de investigación 2022-11-21T23:44:50Z 2022-11-21T23:44:50Z 2019-12 info:eu-repo/semantics/bachelorThesis https://repositorio.earth.ac.cr/handle/UEARTH/441 eng info:eu-repo/semantics/openAccess application/pdf application/pdf Universidad EARTH Universidad EARTH Repositorio Digital UEARTH
institution UEARTH CR
collection DSpace
country Costa Rica
countrycode CR
component Bibliográfico
access En linea
databasecode dig-uearth-cr
tag biblioteca
region America Central
libraryname Biblioteca W. K. Kellogg de la UEARTH
language eng
topic PHASEOLUS VULGARIS
FRIJOL (PHASEOLUS)
BACTERIAS FIJADORAS DE NITROGENO
BRADYRHIZOBIUM JAPONICUM
RHIZOBIUM
https://purl.org/pe-repo/ocde/ford#4.01.01
PHASEOLUS VULGARIS
FRIJOL (PHASEOLUS)
BACTERIAS FIJADORAS DE NITROGENO
BRADYRHIZOBIUM JAPONICUM
RHIZOBIUM
https://purl.org/pe-repo/ocde/ford#4.01.01
spellingShingle PHASEOLUS VULGARIS
FRIJOL (PHASEOLUS)
BACTERIAS FIJADORAS DE NITROGENO
BRADYRHIZOBIUM JAPONICUM
RHIZOBIUM
https://purl.org/pe-repo/ocde/ford#4.01.01
PHASEOLUS VULGARIS
FRIJOL (PHASEOLUS)
BACTERIAS FIJADORAS DE NITROGENO
BRADYRHIZOBIUM JAPONICUM
RHIZOBIUM
https://purl.org/pe-repo/ocde/ford#4.01.01
Shareka, Forget
Dilbato, Lidia
Evaluation of genotypic correlations of nitrogen-fixing bacteria in common beans (Phaseolus vulgaris L.).
description The common bean (Phaseolus vulgaris L.) is a pulse and legume of significant agronomic importance because of its high nutritive values and ability to fix atmospheric nitrogen. It is grown across the world in America, Australia, Europe, the Middle East, Asia and Africa. In this research, a greenhouse experiment was conducted to evaluate the genotypic correlations of nitrogen-fixing bacteria (Rhizobium) in common beans. The red common bean Chirripo variety was used with seven treatments with five replicates of each: two with Bradyrhizobium japonicum, two with Rhizobium sp., one soil treatment, one substrate treatment receiving nitrogen and the control, which was only substrate. Six bacteria isolates were made and amplified by polymerase chain reaction (PCR). The 16S rRNA sequence were used to identify the isolated Rhizobia and assess their evolutionary relationship. The results obtained showed that the inoculum we had as Bradyrhizobium japonicum was actually Bradyrhizobium sp. It had excellent results, producing big and red nodules. Rhizobium sp. produced small nodules but effectively fixed nitrogen. In addition, the soils from the EARTH University Organic Farm produced nodules, though in smaller quantities. Thus, Bradyrhizobium sp. can be a successful alternative strain for common bean inoculation. The obtained phylogenetic results of the 16S rRNA show that the isolated Rhizobia were closely related to the genus Rhizobium, which is known for forming the symbiotic relationship with common beans: Rhizobium sp., Rhizobium tropici, and Bradyrhizobium sp. Common beans proved to be promiscuous (multi-host plant).
author2 Tamayo, Ana Cristina
author_facet Tamayo, Ana Cristina
Shareka, Forget
Dilbato, Lidia
format info:eu-repo/semantics/bachelorThesis
topic_facet PHASEOLUS VULGARIS
FRIJOL (PHASEOLUS)
BACTERIAS FIJADORAS DE NITROGENO
BRADYRHIZOBIUM JAPONICUM
RHIZOBIUM
https://purl.org/pe-repo/ocde/ford#4.01.01
author Shareka, Forget
Dilbato, Lidia
author_sort Shareka, Forget
title Evaluation of genotypic correlations of nitrogen-fixing bacteria in common beans (Phaseolus vulgaris L.).
title_short Evaluation of genotypic correlations of nitrogen-fixing bacteria in common beans (Phaseolus vulgaris L.).
title_full Evaluation of genotypic correlations of nitrogen-fixing bacteria in common beans (Phaseolus vulgaris L.).
title_fullStr Evaluation of genotypic correlations of nitrogen-fixing bacteria in common beans (Phaseolus vulgaris L.).
title_full_unstemmed Evaluation of genotypic correlations of nitrogen-fixing bacteria in common beans (Phaseolus vulgaris L.).
title_sort evaluation of genotypic correlations of nitrogen-fixing bacteria in common beans (phaseolus vulgaris l.).
publisher Universidad EARTH
publishDate 2019-12
url https://repositorio.earth.ac.cr/handle/UEARTH/441
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