The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae)
Cheilodactylus variegatus is a common benthivorous marine fish inhabiting in rocky subtidal habitats in the eastern south Pacific coast of Chile and Peru. However, its biology and ecology are relatively understudied and its taxonomic assignment has been debated recently. The complete mitochondrial genome was assembled de novo and mapped to a reference using 5.97 million of reads obtained through Ion Torrent next generation sequencing, resulting in a circular sequence of 16,652 bp in length. Gene composition and arrangement comprised to that reported for most fishes and contained the typical structure of 2 rRNAs, 13 protein-coding genes, 22 tRNAs and 1 non-coding region. This mitogenome provides a valuable resource for studies of fish molecular systematics, phylogeography and population genetics.
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Format: | Artículo de revista biblioteca |
Language: | English |
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Taylor & Francis
2016
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Subjects: | NGS, marine fish, Bilagay, |
Online Access: | http://repositorio.uchile.cl/handle/2250/141814 |
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dig-uchile-cl-2250-1418142019-04-10T22:25:14Z The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae) Quezada Romegialli, Claudio Véliz Baeza, David Docmac, Felipe Harrod, Chris NGS marine fish Bilagay Cheilodactylus variegatus is a common benthivorous marine fish inhabiting in rocky subtidal habitats in the eastern south Pacific coast of Chile and Peru. However, its biology and ecology are relatively understudied and its taxonomic assignment has been debated recently. The complete mitochondrial genome was assembled de novo and mapped to a reference using 5.97 million of reads obtained through Ion Torrent next generation sequencing, resulting in a circular sequence of 16,652 bp in length. Gene composition and arrangement comprised to that reported for most fishes and contained the typical structure of 2 rRNAs, 13 protein-coding genes, 22 tRNAs and 1 non-coding region. This mitogenome provides a valuable resource for studies of fish molecular systematics, phylogeography and population genetics. CONICYT, Rector of the University of Antofagasta 2016-12-12T21:26:08Z 2016-12-12T21:26:08Z 2016 Artículo de revista MitochondriaL DNA. Volumen: 27 Número: 4 Páginas: 2359-2360 10.3109/19401736.2015.1025263 http://repositorio.uchile.cl/handle/2250/141814 en Attribution-NonCommercial-NoDerivs 3.0 Chile http://creativecommons.org/licenses/by-nc-nd/3.0/cl/ application/pdf Taylor & Francis MitochondriaL DNA |
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NGS marine fish Bilagay NGS marine fish Bilagay |
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NGS marine fish Bilagay NGS marine fish Bilagay Quezada Romegialli, Claudio Véliz Baeza, David Docmac, Felipe Harrod, Chris The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae) |
description |
Cheilodactylus variegatus is a common benthivorous marine fish inhabiting in rocky subtidal habitats in the eastern south Pacific coast of Chile and Peru. However, its biology and ecology are relatively understudied and its taxonomic assignment has been debated recently. The complete mitochondrial genome was assembled de novo and mapped to a reference using 5.97 million of reads obtained through Ion Torrent next generation sequencing, resulting in a circular sequence of 16,652 bp in length. Gene composition and arrangement comprised to that reported for most fishes and contained the typical structure of 2 rRNAs, 13 protein-coding genes, 22 tRNAs and 1 non-coding region. This mitogenome provides a valuable resource for studies of fish molecular systematics, phylogeography and population genetics. |
format |
Artículo de revista |
topic_facet |
NGS marine fish Bilagay |
author |
Quezada Romegialli, Claudio Véliz Baeza, David Docmac, Felipe Harrod, Chris |
author_facet |
Quezada Romegialli, Claudio Véliz Baeza, David Docmac, Felipe Harrod, Chris |
author_sort |
Quezada Romegialli, Claudio |
title |
The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae) |
title_short |
The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae) |
title_full |
The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae) |
title_fullStr |
The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae) |
title_full_unstemmed |
The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae) |
title_sort |
complete mitochondrial genome of the rocky reef fish cheilodactylus variegatus valenciennes, 1833 (teleostei: cheilodactylidae) |
publisher |
Taylor & Francis |
publishDate |
2016 |
url |
http://repositorio.uchile.cl/handle/2250/141814 |
work_keys_str_mv |
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