The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae)

Cheilodactylus variegatus is a common benthivorous marine fish inhabiting in rocky subtidal habitats in the eastern south Pacific coast of Chile and Peru. However, its biology and ecology are relatively understudied and its taxonomic assignment has been debated recently. The complete mitochondrial genome was assembled de novo and mapped to a reference using 5.97 million of reads obtained through Ion Torrent next generation sequencing, resulting in a circular sequence of 16,652 bp in length. Gene composition and arrangement comprised to that reported for most fishes and contained the typical structure of 2 rRNAs, 13 protein-coding genes, 22 tRNAs and 1 non-coding region. This mitogenome provides a valuable resource for studies of fish molecular systematics, phylogeography and population genetics.

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Bibliographic Details
Main Authors: Quezada Romegialli, Claudio, Véliz Baeza, David, Docmac, Felipe, Harrod, Chris
Format: Artículo de revista biblioteca
Language:English
Published: Taylor & Francis 2016
Subjects:NGS, marine fish, Bilagay,
Online Access:http://repositorio.uchile.cl/handle/2250/141814
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spelling dig-uchile-cl-2250-1418142019-04-10T22:25:14Z The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae) Quezada Romegialli, Claudio Véliz Baeza, David Docmac, Felipe Harrod, Chris NGS marine fish Bilagay Cheilodactylus variegatus is a common benthivorous marine fish inhabiting in rocky subtidal habitats in the eastern south Pacific coast of Chile and Peru. However, its biology and ecology are relatively understudied and its taxonomic assignment has been debated recently. The complete mitochondrial genome was assembled de novo and mapped to a reference using 5.97 million of reads obtained through Ion Torrent next generation sequencing, resulting in a circular sequence of 16,652 bp in length. Gene composition and arrangement comprised to that reported for most fishes and contained the typical structure of 2 rRNAs, 13 protein-coding genes, 22 tRNAs and 1 non-coding region. This mitogenome provides a valuable resource for studies of fish molecular systematics, phylogeography and population genetics. CONICYT, Rector of the University of Antofagasta 2016-12-12T21:26:08Z 2016-12-12T21:26:08Z 2016 Artículo de revista MitochondriaL DNA. Volumen: 27 Número: 4 Páginas: 2359-2360 10.3109/19401736.2015.1025263 http://repositorio.uchile.cl/handle/2250/141814 en Attribution-NonCommercial-NoDerivs 3.0 Chile http://creativecommons.org/licenses/by-nc-nd/3.0/cl/ application/pdf Taylor & Francis MitochondriaL DNA
institution UCHILE CL
collection DSpace
country Chile
countrycode CL
component Bibliográfico
access En linea
databasecode dig-uchile-cl
tag biblioteca
region America del Sur
libraryname Dirección de Servicios de Información y Bibliotecas de la UCHILE
language English
topic NGS
marine fish
Bilagay
NGS
marine fish
Bilagay
spellingShingle NGS
marine fish
Bilagay
NGS
marine fish
Bilagay
Quezada Romegialli, Claudio
Véliz Baeza, David
Docmac, Felipe
Harrod, Chris
The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae)
description Cheilodactylus variegatus is a common benthivorous marine fish inhabiting in rocky subtidal habitats in the eastern south Pacific coast of Chile and Peru. However, its biology and ecology are relatively understudied and its taxonomic assignment has been debated recently. The complete mitochondrial genome was assembled de novo and mapped to a reference using 5.97 million of reads obtained through Ion Torrent next generation sequencing, resulting in a circular sequence of 16,652 bp in length. Gene composition and arrangement comprised to that reported for most fishes and contained the typical structure of 2 rRNAs, 13 protein-coding genes, 22 tRNAs and 1 non-coding region. This mitogenome provides a valuable resource for studies of fish molecular systematics, phylogeography and population genetics.
format Artículo de revista
topic_facet NGS
marine fish
Bilagay
author Quezada Romegialli, Claudio
Véliz Baeza, David
Docmac, Felipe
Harrod, Chris
author_facet Quezada Romegialli, Claudio
Véliz Baeza, David
Docmac, Felipe
Harrod, Chris
author_sort Quezada Romegialli, Claudio
title The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae)
title_short The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae)
title_full The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae)
title_fullStr The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae)
title_full_unstemmed The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae)
title_sort complete mitochondrial genome of the rocky reef fish cheilodactylus variegatus valenciennes, 1833 (teleostei: cheilodactylidae)
publisher Taylor & Francis
publishDate 2016
url http://repositorio.uchile.cl/handle/2250/141814
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