Real-time fluorogenic reverse transcription polymerase chain reaction assay for detection of African horse sickness virus

African horse sickness is an arthropod-borne disease of the equine included in the World Organization for Animal Health (OIE) list with important economic consequences for horse trade. The disease is caused by African horse sickness virus (AHSV; family Reoviridae, genus Orbivirus), which is transmitted by Culicoides midges. It is endemic in sub-Saharan Africa, spreading occasionally outside this area where the occurrence of Culicoides vectors allows virus transmission. Currently, only conventional (gel-based) reverse transcription polymerase chain reaction (RT-PCR) protocols are available for its detection; however, these methods are cumbersome and difficult to apply when large numbers of samples are to be tested, as in the case of epizootics. To overcome this problem, a real-time RT-PCR method has been developed, based on a 5′-Taq nuclease-3′-minor groove binder-DNA probe (TaqMan MGB) for detection of a wide range of AHSV serotypes and strains designed to the highly conserved region of the VP7 gene (segment 7). The method was able to detect all prototype strains from the 9 known serotypes of the virus, with a high analytical sensitivity; no cross-reactions were observed with other orbiviruses or with other viruses affecting horses. The diagnostic sensitivity was assessed using a panel of AHSV-positive tissue samples from an epizootic that occurred in Spain between 1987 and 1990. This method, which can be performed in 96-well format, is suitable for large-scale surveillance of AHSV in areas where it can potentially spread.

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Main Authors: Agüero, M., Gómez-Tejedor, C., Cubillo, M. Á, Rubio, C., Romero, E., Jiménez-Clavero, M. A.
Format: journal article biblioteca
Language:eng
Published: 2008
Online Access:http://hdl.handle.net/20.500.12792/2296
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spelling dig-inia-es-20.500.12792-22962020-12-15T09:52:30Z Real-time fluorogenic reverse transcription polymerase chain reaction assay for detection of African horse sickness virus Agüero, M. Gómez-Tejedor, C. Cubillo, M. Á, Rubio, C. Romero, E. Jiménez-Clavero, M. A. African horse sickness is an arthropod-borne disease of the equine included in the World Organization for Animal Health (OIE) list with important economic consequences for horse trade. The disease is caused by African horse sickness virus (AHSV; family Reoviridae, genus Orbivirus), which is transmitted by Culicoides midges. It is endemic in sub-Saharan Africa, spreading occasionally outside this area where the occurrence of Culicoides vectors allows virus transmission. Currently, only conventional (gel-based) reverse transcription polymerase chain reaction (RT-PCR) protocols are available for its detection; however, these methods are cumbersome and difficult to apply when large numbers of samples are to be tested, as in the case of epizootics. To overcome this problem, a real-time RT-PCR method has been developed, based on a 5′-Taq nuclease-3′-minor groove binder-DNA probe (TaqMan MGB) for detection of a wide range of AHSV serotypes and strains designed to the highly conserved region of the VP7 gene (segment 7). The method was able to detect all prototype strains from the 9 known serotypes of the virus, with a high analytical sensitivity; no cross-reactions were observed with other orbiviruses or with other viruses affecting horses. The diagnostic sensitivity was assessed using a panel of AHSV-positive tissue samples from an epizootic that occurred in Spain between 1987 and 1990. This method, which can be performed in 96-well format, is suitable for large-scale surveillance of AHSV in areas where it can potentially spread. 2020-10-22T12:47:34Z 2020-10-22T12:47:34Z 2008 journal article http://hdl.handle.net/20.500.12792/2296 10.1177/104063870802000310 eng Attribution-NonCommercial-ShareAlike 4.0 International http://creativecommons.org/licenses/by-nc-sa/4.0/ open access
institution INIA ES
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country España
countrycode ES
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libraryname Biblioteca del INIA España
language eng
description African horse sickness is an arthropod-borne disease of the equine included in the World Organization for Animal Health (OIE) list with important economic consequences for horse trade. The disease is caused by African horse sickness virus (AHSV; family Reoviridae, genus Orbivirus), which is transmitted by Culicoides midges. It is endemic in sub-Saharan Africa, spreading occasionally outside this area where the occurrence of Culicoides vectors allows virus transmission. Currently, only conventional (gel-based) reverse transcription polymerase chain reaction (RT-PCR) protocols are available for its detection; however, these methods are cumbersome and difficult to apply when large numbers of samples are to be tested, as in the case of epizootics. To overcome this problem, a real-time RT-PCR method has been developed, based on a 5′-Taq nuclease-3′-minor groove binder-DNA probe (TaqMan MGB) for detection of a wide range of AHSV serotypes and strains designed to the highly conserved region of the VP7 gene (segment 7). The method was able to detect all prototype strains from the 9 known serotypes of the virus, with a high analytical sensitivity; no cross-reactions were observed with other orbiviruses or with other viruses affecting horses. The diagnostic sensitivity was assessed using a panel of AHSV-positive tissue samples from an epizootic that occurred in Spain between 1987 and 1990. This method, which can be performed in 96-well format, is suitable for large-scale surveillance of AHSV in areas where it can potentially spread.
format journal article
author Agüero, M.
Gómez-Tejedor, C.
Cubillo, M. Á, Rubio, C.
Romero, E.
Jiménez-Clavero, M. A.
spellingShingle Agüero, M.
Gómez-Tejedor, C.
Cubillo, M. Á, Rubio, C.
Romero, E.
Jiménez-Clavero, M. A.
Real-time fluorogenic reverse transcription polymerase chain reaction assay for detection of African horse sickness virus
author_facet Agüero, M.
Gómez-Tejedor, C.
Cubillo, M. Á, Rubio, C.
Romero, E.
Jiménez-Clavero, M. A.
author_sort Agüero, M.
title Real-time fluorogenic reverse transcription polymerase chain reaction assay for detection of African horse sickness virus
title_short Real-time fluorogenic reverse transcription polymerase chain reaction assay for detection of African horse sickness virus
title_full Real-time fluorogenic reverse transcription polymerase chain reaction assay for detection of African horse sickness virus
title_fullStr Real-time fluorogenic reverse transcription polymerase chain reaction assay for detection of African horse sickness virus
title_full_unstemmed Real-time fluorogenic reverse transcription polymerase chain reaction assay for detection of African horse sickness virus
title_sort real-time fluorogenic reverse transcription polymerase chain reaction assay for detection of african horse sickness virus
publishDate 2008
url http://hdl.handle.net/20.500.12792/2296
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