Interannual dynamics of Tuber melanosporum and fungal communities in productive black truffle orchards amended with truffle nests

Truffle growers devote great efforts to improve black truffle productivity, developing agronomic practices such as 'truffle nests' (peat amendments that are supplemented with truffle spore inoculum). It has been hypothesized that improved fruiting associated with nests is linked to stimulation of truffle mycelia previously established in soil or to changes generated in soil fungal community. To assess this, we used real-time PCR to quantify black truffle extraradical mycelium during 2 years after nests installation. We also characterized the fungal community via high-throughput amplicon sequencing of the ITS region of rRNA genes. We found that neither the abundance of truffle mycelium in nests nor in the soil-nest interphase was higher than in the bulk soil, which indicates that nests do not improve mycelial growth. The fungal community in nests showed lower richness and Shannon index and was compositionally different from that of soil, which suggests that nests may act as an open niche for fungal colonization that facilitates truffle fruiting. The ectomycorrhizal fungal community showed lower richness in nests. However, no negative relationships between amount of truffle mycelium and reads of other ectomycorrhizal fungi were found, thus countering the hypothesis that ectomycorrhizal competition plays a role in the nest effect.

Saved in:
Bibliographic Details
Main Authors: Garcia-Barreda, Sergi, Marco, Pedro, Bonito, Gregory, Parladé, Javier, Sánchez, Sergio, González, Vicente, Larena, Inmaculada, Benucci, Gian Maria Niccolò
Other Authors: CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)
Format: artículo biblioteca
Language:English
Published: Oxford University Press 2023-08-01
Subjects:Tuber melanosporum, ITS amplicon sequencing, Ectomycorrhizal fungi, Extraradical mycelium, Fungal community, Truffle nests, Strengthen the means of implementation and revitalize the Global Partnership for Sustainable Development,
Online Access:http://hdl.handle.net/10261/334909
http://dx.doi.org/10.13039/100000001
https://api.elsevier.com/content/abstract/scopus_id/85166376613
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-inia-es-10261-334909
record_format koha
spelling dig-inia-es-10261-3349092024-05-25T20:41:43Z Interannual dynamics of Tuber melanosporum and fungal communities in productive black truffle orchards amended with truffle nests Garcia-Barreda, Sergi Marco, Pedro Bonito, Gregory Parladé, Javier Sánchez, Sergio González, Vicente Larena, Inmaculada Benucci, Gian Maria Niccolò CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA) Ministerio de Ciencia, Innovación y Universidades (España) National Science Foundation (US) Garcia-Barreda, Sergi [0000-0002-7248-234X] Marco, Pedro [0000-0003-3384-7534] Bonito, Gregory [0000-0002-7262-8978] Parladé, Javier [0000-0002-0867-3280] Sánchez, Sergio [0000-0003-4331-9794] González, Vicente [0000-0002-2535-6914] Larena, Inmaculada [0000-0001-8424-8916] Benucci, Gian Maria Niccolò [0000-0003-1589-947X] Tuber melanosporum ITS amplicon sequencing Ectomycorrhizal fungi Extraradical mycelium Fungal community Truffle nests Strengthen the means of implementation and revitalize the Global Partnership for Sustainable Development Truffle growers devote great efforts to improve black truffle productivity, developing agronomic practices such as 'truffle nests' (peat amendments that are supplemented with truffle spore inoculum). It has been hypothesized that improved fruiting associated with nests is linked to stimulation of truffle mycelia previously established in soil or to changes generated in soil fungal community. To assess this, we used real-time PCR to quantify black truffle extraradical mycelium during 2 years after nests installation. We also characterized the fungal community via high-throughput amplicon sequencing of the ITS region of rRNA genes. We found that neither the abundance of truffle mycelium in nests nor in the soil-nest interphase was higher than in the bulk soil, which indicates that nests do not improve mycelial growth. The fungal community in nests showed lower richness and Shannon index and was compositionally different from that of soil, which suggests that nests may act as an open niche for fungal colonization that facilitates truffle fruiting. The ectomycorrhizal fungal community showed lower richness in nests. However, no negative relationships between amount of truffle mycelium and reads of other ectomycorrhizal fungi were found, thus countering the hypothesis that ectomycorrhizal competition plays a role in the nest effect. This work was supported by the Instituto Nacional de Investigaciones Agrarias (collaboration agreement 2016/1/0010 and RTA2015-00053-00-00 to S. S.); Spanish Ministry of Science, Innovation and Universities (RTI2018-093907-B-C21/22 to J. P.), and the National Science Foundation (Award #1946445 to G. B.). Peer reviewed 2023-09-12T08:04:14Z 2023-09-12T08:04:14Z 2023-08-01 artículo http://purl.org/coar/resource_type/c_6501 FEMS Microbiology Ecology 99(8): fiad084 (2023) 0168-6496 http://hdl.handle.net/10261/334909 10.1093/femsec/fiad084 1574-6941 http://dx.doi.org/10.13039/100000001 37481697 2-s2.0-85166376613 https://api.elsevier.com/content/abstract/scopus_id/85166376613 en #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/INIA-CSIC//RTA2015-00053-00-00 info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/RTI2018-093907-B-C21/ES/DISEÑO E IMPLEMENTACION DE SISTEMAS MULTIPRODUCTIVOS SOSTENIBLES EN TRUFICULTURA Y ANALISIS DE LOS SERVICIOS ECOSISTEMICOS ASOCIADOS/ info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/RTI2018-093907-B-C22/ES/DISEÑO E IMPLEMENTACION DE SISTEMAS MULTIPRODUCTIVOS SOSTENIBLES EN TRUFICULTURA Y ANALISIS DE LOS SERVICIOS ECOSISTEMICOS ASOCIADOS/ Departamento de Protección Vegetal Publisher's version https://doi.org/10.1093/femsec/fiad084 Sí open Oxford University Press
institution INIA ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-inia-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del INIA España
language English
topic Tuber melanosporum
ITS amplicon sequencing
Ectomycorrhizal fungi
Extraradical mycelium
Fungal community
Truffle nests
Strengthen the means of implementation and revitalize the Global Partnership for Sustainable Development
Tuber melanosporum
ITS amplicon sequencing
Ectomycorrhizal fungi
Extraradical mycelium
Fungal community
Truffle nests
Strengthen the means of implementation and revitalize the Global Partnership for Sustainable Development
spellingShingle Tuber melanosporum
ITS amplicon sequencing
Ectomycorrhizal fungi
Extraradical mycelium
Fungal community
Truffle nests
Strengthen the means of implementation and revitalize the Global Partnership for Sustainable Development
Tuber melanosporum
ITS amplicon sequencing
Ectomycorrhizal fungi
Extraradical mycelium
Fungal community
Truffle nests
Strengthen the means of implementation and revitalize the Global Partnership for Sustainable Development
Garcia-Barreda, Sergi
Marco, Pedro
Bonito, Gregory
Parladé, Javier
Sánchez, Sergio
González, Vicente
Larena, Inmaculada
Benucci, Gian Maria Niccolò
Interannual dynamics of Tuber melanosporum and fungal communities in productive black truffle orchards amended with truffle nests
description Truffle growers devote great efforts to improve black truffle productivity, developing agronomic practices such as 'truffle nests' (peat amendments that are supplemented with truffle spore inoculum). It has been hypothesized that improved fruiting associated with nests is linked to stimulation of truffle mycelia previously established in soil or to changes generated in soil fungal community. To assess this, we used real-time PCR to quantify black truffle extraradical mycelium during 2 years after nests installation. We also characterized the fungal community via high-throughput amplicon sequencing of the ITS region of rRNA genes. We found that neither the abundance of truffle mycelium in nests nor in the soil-nest interphase was higher than in the bulk soil, which indicates that nests do not improve mycelial growth. The fungal community in nests showed lower richness and Shannon index and was compositionally different from that of soil, which suggests that nests may act as an open niche for fungal colonization that facilitates truffle fruiting. The ectomycorrhizal fungal community showed lower richness in nests. However, no negative relationships between amount of truffle mycelium and reads of other ectomycorrhizal fungi were found, thus countering the hypothesis that ectomycorrhizal competition plays a role in the nest effect.
author2 CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)
author_facet CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)
Garcia-Barreda, Sergi
Marco, Pedro
Bonito, Gregory
Parladé, Javier
Sánchez, Sergio
González, Vicente
Larena, Inmaculada
Benucci, Gian Maria Niccolò
format artículo
topic_facet Tuber melanosporum
ITS amplicon sequencing
Ectomycorrhizal fungi
Extraradical mycelium
Fungal community
Truffle nests
Strengthen the means of implementation and revitalize the Global Partnership for Sustainable Development
author Garcia-Barreda, Sergi
Marco, Pedro
Bonito, Gregory
Parladé, Javier
Sánchez, Sergio
González, Vicente
Larena, Inmaculada
Benucci, Gian Maria Niccolò
author_sort Garcia-Barreda, Sergi
title Interannual dynamics of Tuber melanosporum and fungal communities in productive black truffle orchards amended with truffle nests
title_short Interannual dynamics of Tuber melanosporum and fungal communities in productive black truffle orchards amended with truffle nests
title_full Interannual dynamics of Tuber melanosporum and fungal communities in productive black truffle orchards amended with truffle nests
title_fullStr Interannual dynamics of Tuber melanosporum and fungal communities in productive black truffle orchards amended with truffle nests
title_full_unstemmed Interannual dynamics of Tuber melanosporum and fungal communities in productive black truffle orchards amended with truffle nests
title_sort interannual dynamics of tuber melanosporum and fungal communities in productive black truffle orchards amended with truffle nests
publisher Oxford University Press
publishDate 2023-08-01
url http://hdl.handle.net/10261/334909
http://dx.doi.org/10.13039/100000001
https://api.elsevier.com/content/abstract/scopus_id/85166376613
work_keys_str_mv AT garciabarredasergi interannualdynamicsoftubermelanosporumandfungalcommunitiesinproductiveblacktruffleorchardsamendedwithtrufflenests
AT marcopedro interannualdynamicsoftubermelanosporumandfungalcommunitiesinproductiveblacktruffleorchardsamendedwithtrufflenests
AT bonitogregory interannualdynamicsoftubermelanosporumandfungalcommunitiesinproductiveblacktruffleorchardsamendedwithtrufflenests
AT parladejavier interannualdynamicsoftubermelanosporumandfungalcommunitiesinproductiveblacktruffleorchardsamendedwithtrufflenests
AT sanchezsergio interannualdynamicsoftubermelanosporumandfungalcommunitiesinproductiveblacktruffleorchardsamendedwithtrufflenests
AT gonzalezvicente interannualdynamicsoftubermelanosporumandfungalcommunitiesinproductiveblacktruffleorchardsamendedwithtrufflenests
AT larenainmaculada interannualdynamicsoftubermelanosporumandfungalcommunitiesinproductiveblacktruffleorchardsamendedwithtrufflenests
AT benuccigianmarianiccolo interannualdynamicsoftubermelanosporumandfungalcommunitiesinproductiveblacktruffleorchardsamendedwithtrufflenests
_version_ 1802819782631751680