Assessment of the uniformity and stability of grapevine cultivars using a set of microsatellite markers

Solidity of microsatellite markers is a key issue for varietal identification, especially when they are used for legal purposes, what includes their probable future use in the distinctness, uniformity and stability testing of new varieties needed for the granting of Plant Breeders' Rights. Nine grapevine microsatellites (VVS2, VVMD5, VVMD27, VVMD28, ssrVrZAG29, ssrVrZAG62, ssrVrZAG67, ssrVrZAG83 and ssrVrZAG112), which had previously demonstrated its capacity to discriminate any grapevine variety, have been assessed to evaluate its uniformity and stability. 19 varieties were selected, representative of a high diversity for morphological, agronomical, cultural and historical aspects, as well as for microsatellite allele variability. Then, for each variety, uniformity and stability were evaluated through the analysis of 50 plants from each of three different plots, and five plants from each of seven additional plots. Material from 4,137 plants of 229 plots of the 19 varieties was sampled in seven countries. Of 3,654 plants analyzed with the set of nine microsatellites, 3,299 were of the right variety and used for the survey. An average of 172 individual values was studied for each allele of each microsatellite of each variety, and none differences were detected that could not be explained as technical variations, with the exception of several putative chimeras in two varieties. Of the total of 171 variety x microsatellite combinations, only in one combination ('Merlot' x VVMD27) the number of off-types exceeded the threshold allowed. The remaining 170 combinations have been found uniform and stable according to internationally accepted rules. © 2012 Springer Science+Business Media B.V.

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Main Authors: Vélez, M. D., Ibáñez, J.
Format: journal article biblioteca
Language:English
Published: Springer 2012
Subjects:DUS testing, Plant breeders’ rights, SSR, UPOV, Varietal identification, Vitis vinifera L.,
Online Access:http://hdl.handle.net/20.500.12792/4679
http://hdl.handle.net/10261/294729
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spelling dig-inia-es-10261-2947292023-02-20T10:41:29Z Assessment of the uniformity and stability of grapevine cultivars using a set of microsatellite markers Vélez, M. D. Ibáñez, J. DUS testing Plant breeders’ rights SSR UPOV Varietal identification Vitis vinifera L. Solidity of microsatellite markers is a key issue for varietal identification, especially when they are used for legal purposes, what includes their probable future use in the distinctness, uniformity and stability testing of new varieties needed for the granting of Plant Breeders' Rights. Nine grapevine microsatellites (VVS2, VVMD5, VVMD27, VVMD28, ssrVrZAG29, ssrVrZAG62, ssrVrZAG67, ssrVrZAG83 and ssrVrZAG112), which had previously demonstrated its capacity to discriminate any grapevine variety, have been assessed to evaluate its uniformity and stability. 19 varieties were selected, representative of a high diversity for morphological, agronomical, cultural and historical aspects, as well as for microsatellite allele variability. Then, for each variety, uniformity and stability were evaluated through the analysis of 50 plants from each of three different plots, and five plants from each of seven additional plots. Material from 4,137 plants of 229 plots of the 19 varieties was sampled in seven countries. Of 3,654 plants analyzed with the set of nine microsatellites, 3,299 were of the right variety and used for the survey. An average of 172 individual values was studied for each allele of each microsatellite of each variety, and none differences were detected that could not be explained as technical variations, with the exception of several putative chimeras in two varieties. Of the total of 171 variety x microsatellite combinations, only in one combination ('Merlot' x VVMD27) the number of off-types exceeded the threshold allowed. The remaining 170 combinations have been found uniform and stable according to internationally accepted rules. © 2012 Springer Science+Business Media B.V. 2023-02-20T10:41:29Z 2023-02-20T10:41:29Z 2012 journal article Euphytica 186: 419-432 (2012) 0014-2336 http://hdl.handle.net/20.500.12792/4679 http://hdl.handle.net/10261/294729 10.1007/s10681-012-0633-0 1573-5060 en none Springer
institution INIA ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-inia-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del INIA España
language English
topic DUS testing
Plant breeders’ rights
SSR
UPOV
Varietal identification
Vitis vinifera L.
DUS testing
Plant breeders’ rights
SSR
UPOV
Varietal identification
Vitis vinifera L.
spellingShingle DUS testing
Plant breeders’ rights
SSR
UPOV
Varietal identification
Vitis vinifera L.
DUS testing
Plant breeders’ rights
SSR
UPOV
Varietal identification
Vitis vinifera L.
Vélez, M. D.
Ibáñez, J.
Assessment of the uniformity and stability of grapevine cultivars using a set of microsatellite markers
description Solidity of microsatellite markers is a key issue for varietal identification, especially when they are used for legal purposes, what includes their probable future use in the distinctness, uniformity and stability testing of new varieties needed for the granting of Plant Breeders' Rights. Nine grapevine microsatellites (VVS2, VVMD5, VVMD27, VVMD28, ssrVrZAG29, ssrVrZAG62, ssrVrZAG67, ssrVrZAG83 and ssrVrZAG112), which had previously demonstrated its capacity to discriminate any grapevine variety, have been assessed to evaluate its uniformity and stability. 19 varieties were selected, representative of a high diversity for morphological, agronomical, cultural and historical aspects, as well as for microsatellite allele variability. Then, for each variety, uniformity and stability were evaluated through the analysis of 50 plants from each of three different plots, and five plants from each of seven additional plots. Material from 4,137 plants of 229 plots of the 19 varieties was sampled in seven countries. Of 3,654 plants analyzed with the set of nine microsatellites, 3,299 were of the right variety and used for the survey. An average of 172 individual values was studied for each allele of each microsatellite of each variety, and none differences were detected that could not be explained as technical variations, with the exception of several putative chimeras in two varieties. Of the total of 171 variety x microsatellite combinations, only in one combination ('Merlot' x VVMD27) the number of off-types exceeded the threshold allowed. The remaining 170 combinations have been found uniform and stable according to internationally accepted rules. © 2012 Springer Science+Business Media B.V.
format journal article
topic_facet DUS testing
Plant breeders’ rights
SSR
UPOV
Varietal identification
Vitis vinifera L.
author Vélez, M. D.
Ibáñez, J.
author_facet Vélez, M. D.
Ibáñez, J.
author_sort Vélez, M. D.
title Assessment of the uniformity and stability of grapevine cultivars using a set of microsatellite markers
title_short Assessment of the uniformity and stability of grapevine cultivars using a set of microsatellite markers
title_full Assessment of the uniformity and stability of grapevine cultivars using a set of microsatellite markers
title_fullStr Assessment of the uniformity and stability of grapevine cultivars using a set of microsatellite markers
title_full_unstemmed Assessment of the uniformity and stability of grapevine cultivars using a set of microsatellite markers
title_sort assessment of the uniformity and stability of grapevine cultivars using a set of microsatellite markers
publisher Springer
publishDate 2012
url http://hdl.handle.net/20.500.12792/4679
http://hdl.handle.net/10261/294729
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AT ibanezj assessmentoftheuniformityandstabilityofgrapevinecultivarsusingasetofmicrosatellitemarkers
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