SSR markers for monitoring an in vitro core collection of Populus tremula

Core collections efficiently preserve genetic diversity and facilitate collection management and "ex situ" conservation of genetic resources. Populus tremula (European aspen) is demanded by plant growers and breeders but there are very few data on the genetic variation in the geographic distribution of this species in Spain. Microsatellite markers are useful for the evaluation of genetic variability and identification due to their abundance and polymorphism. Six pairs of oligonucleotide primers designed for simple sequence repeats (SSR) of quaking aspen (P. tremuloides) were successfully used in European aspen. Number of alleles per locus were low in this species in comparison to outcrossed, long-lived woody perennials due to the importance of vegetative propagation by root suckers in aspen stands. Mean heterozygosity (0.475) was similar to that reported in quaking aspen. Cluster analysis suggests that postglacial migration of European aspen took place from the Pyrenees in two directions westward and southward through mountain ranges of the Iberian Peninsula. To preserve the allelic richness of the P. tremula in vitro collection in Spain, a core collection of 26 clones is proposed.

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Bibliographic Details
Main Authors: Gómez, A., Manzanera, J. A., Aguiriano Labandibar, Miren Edurne, Grau, J. M., Bueno, M. A.
Format: artículo biblioteca
Language:English
Published: J.D. Sauerländer's Verlag 2003
Subjects:Allelic richness, Core collection, Genetic resources, Microsatellites, Populus tremula,
Online Access:http://hdl.handle.net/20.500.12792/1755
http://hdl.handle.net/10261/291672
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spelling dig-inia-es-10261-2916722023-02-20T07:20:48Z SSR markers for monitoring an in vitro core collection of Populus tremula Gómez, A. Manzanera, J. A. Aguiriano Labandibar, Miren Edurne Grau, J. M. Bueno, M. A. Allelic richness Core collection Genetic resources Microsatellites Populus tremula Core collections efficiently preserve genetic diversity and facilitate collection management and "ex situ" conservation of genetic resources. Populus tremula (European aspen) is demanded by plant growers and breeders but there are very few data on the genetic variation in the geographic distribution of this species in Spain. Microsatellite markers are useful for the evaluation of genetic variability and identification due to their abundance and polymorphism. Six pairs of oligonucleotide primers designed for simple sequence repeats (SSR) of quaking aspen (P. tremuloides) were successfully used in European aspen. Number of alleles per locus were low in this species in comparison to outcrossed, long-lived woody perennials due to the importance of vegetative propagation by root suckers in aspen stands. Mean heterozygosity (0.475) was similar to that reported in quaking aspen. Cluster analysis suggests that postglacial migration of European aspen took place from the Pyrenees in two directions westward and southward through mountain ranges of the Iberian Peninsula. To preserve the allelic richness of the P. tremula in vitro collection in Spain, a core collection of 26 clones is proposed. 2023-02-20T07:20:48Z 2023-02-20T07:20:48Z 2003 artículo Silvae Genetica 52: 5-6 (2003) 0037-5349 http://hdl.handle.net/20.500.12792/1755 http://hdl.handle.net/10261/291672 en none J.D. Sauerländer's Verlag
institution INIA ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-inia-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del INIA España
language English
topic Allelic richness
Core collection
Genetic resources
Microsatellites
Populus tremula
Allelic richness
Core collection
Genetic resources
Microsatellites
Populus tremula
spellingShingle Allelic richness
Core collection
Genetic resources
Microsatellites
Populus tremula
Allelic richness
Core collection
Genetic resources
Microsatellites
Populus tremula
Gómez, A.
Manzanera, J. A.
Aguiriano Labandibar, Miren Edurne
Grau, J. M.
Bueno, M. A.
SSR markers for monitoring an in vitro core collection of Populus tremula
description Core collections efficiently preserve genetic diversity and facilitate collection management and "ex situ" conservation of genetic resources. Populus tremula (European aspen) is demanded by plant growers and breeders but there are very few data on the genetic variation in the geographic distribution of this species in Spain. Microsatellite markers are useful for the evaluation of genetic variability and identification due to their abundance and polymorphism. Six pairs of oligonucleotide primers designed for simple sequence repeats (SSR) of quaking aspen (P. tremuloides) were successfully used in European aspen. Number of alleles per locus were low in this species in comparison to outcrossed, long-lived woody perennials due to the importance of vegetative propagation by root suckers in aspen stands. Mean heterozygosity (0.475) was similar to that reported in quaking aspen. Cluster analysis suggests that postglacial migration of European aspen took place from the Pyrenees in two directions westward and southward through mountain ranges of the Iberian Peninsula. To preserve the allelic richness of the P. tremula in vitro collection in Spain, a core collection of 26 clones is proposed.
format artículo
topic_facet Allelic richness
Core collection
Genetic resources
Microsatellites
Populus tremula
author Gómez, A.
Manzanera, J. A.
Aguiriano Labandibar, Miren Edurne
Grau, J. M.
Bueno, M. A.
author_facet Gómez, A.
Manzanera, J. A.
Aguiriano Labandibar, Miren Edurne
Grau, J. M.
Bueno, M. A.
author_sort Gómez, A.
title SSR markers for monitoring an in vitro core collection of Populus tremula
title_short SSR markers for monitoring an in vitro core collection of Populus tremula
title_full SSR markers for monitoring an in vitro core collection of Populus tremula
title_fullStr SSR markers for monitoring an in vitro core collection of Populus tremula
title_full_unstemmed SSR markers for monitoring an in vitro core collection of Populus tremula
title_sort ssr markers for monitoring an in vitro core collection of populus tremula
publisher J.D. Sauerländer's Verlag
publishDate 2003
url http://hdl.handle.net/20.500.12792/1755
http://hdl.handle.net/10261/291672
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