Evolutionary and Gene Expression Analyses Reveal New Insights into the Role of LSU Gene-Family in Plant Responses to Sulfate-Deficiency

Evolutionary and Gene Expression Analyses Reveal New Insights into the Role of LSU Gene-Family in Plant Responses to Sulfate-Deficiency

16 Pág. Centro de Biotecnología y Genómica de Plantas (CBGP)

Saved in:
Bibliographic Details
Main Authors: Uribe, Felipe, Henríquez-Valencia, Carlos, Arenas-M, Anita, Medina, Joaquín, Vidal, Elena A., Canales, Javier
Other Authors: Agencia Nacional de Investigación y Desarrollo (Chile)
Format: artículo biblioteca
Language:English
Published: Multidisciplinary Digital Publishing Institute 2022-06-07
Subjects:Arabidopsis thaliana, LSU, Solanum lycopersicum, Triticum aestivum, Abiotic stress, Response to low sulfur, Sulfate deficiency, Sulfur nutrition,
Online Access:http://hdl.handle.net/10261/278778
https://api.elsevier.com/content/abstract/scopus_id/85131304892
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-inia-es-10261-278778
record_format koha
spelling dig-inia-es-10261-2787782024-05-15T20:38:08Z Evolutionary and Gene Expression Analyses Reveal New Insights into the Role of LSU Gene-Family in Plant Responses to Sulfate-Deficiency Uribe, Felipe Henríquez-Valencia, Carlos Arenas-M, Anita Medina, Joaquín Vidal, Elena A. Canales, Javier Agencia Nacional de Investigación y Desarrollo (Chile) Ministerio de Ciencia, Innovación y Universidades (España) Uribe, Felipe [0000-0002-3894-0327] Arenas-M, Anita [0000-0002-8459-164X] Medina, Joaquín [0000-0002-1735-330X] Vidal, Elena A [0000-0002-8208-7327] Canales, Javier [0000-0002-6263-6974] Arabidopsis thaliana LSU Solanum lycopersicum Triticum aestivum Abiotic stress Response to low sulfur Sulfate deficiency Sulfur nutrition 16 Pág. Centro de Biotecnología y Genómica de Plantas (CBGP) LSU proteins belong to a plant-specific gene family initially characterized by their strong induction in response to sulfate (S) deficiency. In the last few years, LSUs have arisen as relevant hubs in protein-protein interaction networks, in which they play relevant roles in the response to abiotic and biotic stresses. Most of our knowledge on LSU genomic organization, expression and function comes from studies in Arabidopsis and tobacco, while little is known about the LSU gene repertoire and evolution of this family in land plants. In this work, a total of 270 LSU family members were identified using 134 land plant species with whole-genome sequences available. Phylogenetic analysis revealed that LSU genes belong to a Spermatophyta-specific gene family, and their homologs are distributed in three major groups, two for dicotyledons and one group for monocotyledons. Protein sequence analyses showed four new motifs that further support the subgroup classification by phylogenetic analyses. Moreover, we analyzed the expression of LSU genes in one representative species of each phylogenetic group (wheat, tomato and Arabidopsis) and found a conserved response to S deficiency, suggesting that these genes might play a key role in S stress responses. In summary, our results indicate that LSU genes belong to the Spermatophyta-specific gene family and their response to S deficiency is conserved in angiosperms. This work was funded by the National Agency for Research and Development (ANID) Chile with Program FONDECYT Regular 1190812 and FONDECYT Regular 1211130 and Spanish Science Ministry (PID2020-114165RR-C21 to J.M). J.C. and E.A.V. were supported by ANID—Millennium Science Initiative Program—ICN17_022. We also want to acknowledge the “Severo Ochoa Program for Centres of Excellence in R&D” (CEX2020-000999-S) supported by MCIN/AEI/10.13039/501100011033. Peer reviewed 2022-09-08T11:11:39Z 2022-09-08T11:11:39Z 2022-06-07 artículo http://purl.org/coar/resource_type/c_6501 Plants 11(12): 1526(2022) 2223-7747 http://hdl.handle.net/10261/278778 10.3390/plants11121526 35736678 2-s2.0-85131304892 https://api.elsevier.com/content/abstract/scopus_id/85131304892 en #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2020-114165RR-C21/ES/ANALISIS MOLECULAR DE LAS RESPUESTAS A NITROGENO EN GENOTIPOS DE TOMATE QUE PRESENTAN DIFERENTE NUE/ Plants (Basel, Switzerland) Publisher's version https://doi.org/10.3390/plants11121526 Sí open Multidisciplinary Digital Publishing Institute
institution INIA ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-inia-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del INIA España
language English
topic Arabidopsis thaliana
LSU
Solanum lycopersicum
Triticum aestivum
Abiotic stress
Response to low sulfur
Sulfate deficiency
Sulfur nutrition
Arabidopsis thaliana
LSU
Solanum lycopersicum
Triticum aestivum
Abiotic stress
Response to low sulfur
Sulfate deficiency
Sulfur nutrition
spellingShingle Arabidopsis thaliana
LSU
Solanum lycopersicum
Triticum aestivum
Abiotic stress
Response to low sulfur
Sulfate deficiency
Sulfur nutrition
Arabidopsis thaliana
LSU
Solanum lycopersicum
Triticum aestivum
Abiotic stress
Response to low sulfur
Sulfate deficiency
Sulfur nutrition
Uribe, Felipe
Henríquez-Valencia, Carlos
Arenas-M, Anita
Medina, Joaquín
Vidal, Elena A.
Canales, Javier
Evolutionary and Gene Expression Analyses Reveal New Insights into the Role of LSU Gene-Family in Plant Responses to Sulfate-Deficiency
description 16 Pág. Centro de Biotecnología y Genómica de Plantas (CBGP)
author2 Agencia Nacional de Investigación y Desarrollo (Chile)
author_facet Agencia Nacional de Investigación y Desarrollo (Chile)
Uribe, Felipe
Henríquez-Valencia, Carlos
Arenas-M, Anita
Medina, Joaquín
Vidal, Elena A.
Canales, Javier
format artículo
topic_facet Arabidopsis thaliana
LSU
Solanum lycopersicum
Triticum aestivum
Abiotic stress
Response to low sulfur
Sulfate deficiency
Sulfur nutrition
author Uribe, Felipe
Henríquez-Valencia, Carlos
Arenas-M, Anita
Medina, Joaquín
Vidal, Elena A.
Canales, Javier
author_sort Uribe, Felipe
title Evolutionary and Gene Expression Analyses Reveal New Insights into the Role of LSU Gene-Family in Plant Responses to Sulfate-Deficiency
title_short Evolutionary and Gene Expression Analyses Reveal New Insights into the Role of LSU Gene-Family in Plant Responses to Sulfate-Deficiency
title_full Evolutionary and Gene Expression Analyses Reveal New Insights into the Role of LSU Gene-Family in Plant Responses to Sulfate-Deficiency
title_fullStr Evolutionary and Gene Expression Analyses Reveal New Insights into the Role of LSU Gene-Family in Plant Responses to Sulfate-Deficiency
title_full_unstemmed Evolutionary and Gene Expression Analyses Reveal New Insights into the Role of LSU Gene-Family in Plant Responses to Sulfate-Deficiency
title_sort evolutionary and gene expression analyses reveal new insights into the role of lsu gene-family in plant responses to sulfate-deficiency
publisher Multidisciplinary Digital Publishing Institute
publishDate 2022-06-07
url http://hdl.handle.net/10261/278778
https://api.elsevier.com/content/abstract/scopus_id/85131304892
work_keys_str_mv AT uribefelipe evolutionaryandgeneexpressionanalysesrevealnewinsightsintotheroleoflsugenefamilyinplantresponsestosulfatedeficiency
AT henriquezvalenciacarlos evolutionaryandgeneexpressionanalysesrevealnewinsightsintotheroleoflsugenefamilyinplantresponsestosulfatedeficiency
AT arenasmanita evolutionaryandgeneexpressionanalysesrevealnewinsightsintotheroleoflsugenefamilyinplantresponsestosulfatedeficiency
AT medinajoaquin evolutionaryandgeneexpressionanalysesrevealnewinsightsintotheroleoflsugenefamilyinplantresponsestosulfatedeficiency
AT vidalelenaa evolutionaryandgeneexpressionanalysesrevealnewinsightsintotheroleoflsugenefamilyinplantresponsestosulfatedeficiency
AT canalesjavier evolutionaryandgeneexpressionanalysesrevealnewinsightsintotheroleoflsugenefamilyinplantresponsestosulfatedeficiency
_version_ 1802819650336063488

Similar Items