Assembly prediction in CASP14 with pyDock ab initio docking and scoring

Assembly prediction in CASP14 with pyDock ab initio docking and scoring

Trabajo presentado en 14th Community Wide Experiment on the Critical Assessment of Techniques for Protein Structure Prediction CASP14, celebrado online entre los meses de mayo y septiembre de 2020

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Main Authors: Rosell, Mireia, Rodríguez-Lumbreras, Luis A., Fernández-Recio, Juan
Format: póster de congreso biblioteca
Published: 2020-11-30
Online Access:http://hdl.handle.net/10261/232407
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spelling dig-icvv-es-10261-2324072022-12-23T14:12:49Z Assembly prediction in CASP14 with pyDock ab initio docking and scoring Rosell, Mireia Rodríguez-Lumbreras, Luis A. Fernández-Recio, Juan Trabajo presentado en 14th Community Wide Experiment on the Critical Assessment of Techniques for Protein Structure Prediction CASP14, celebrado online entre los meses de mayo y septiembre de 2020 In the past 3rd common CASP-CAPRI Assembly Prediction challenge, our modeling approach, integrating ab initio docking, template-based modeling, distance-based restraints, low-resolution structural data and symmetry constraints, yielded excellent performance, ranking 2nd among CAPRI predictors, and 1st among CAPRI scorers1. Here we describe our participation in the CASP14 Assembly category, as part of the 4th common CASP-CAPRI Assembly Prediction challenge (CAPRI Round 50). We have participated as human predictors, human scorers, and server scorers, in all the 18 proposed targets, consisting in four hetero-dimers (A1B1), six homodimers (A2), two homo-trimers (A3), two homo-tetramers (A4), one hetero-nonamer (A3B3C3), one homo-20mer (A20), one hetero-27mer (A6B3C12D6), and one homo-240mer (A240). 2021-03-03T11:30:32Z 2021-03-03T11:30:32Z 2020-11-30 2021-03-03T11:30:32Z póster de congreso http://purl.org/coar/resource_type/c_6670 CASP14 (2020) http://hdl.handle.net/10261/232407 Sí open
institution ICVV ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-icvv-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del ICVV España
description Trabajo presentado en 14th Community Wide Experiment on the Critical Assessment of Techniques for Protein Structure Prediction CASP14, celebrado online entre los meses de mayo y septiembre de 2020
format póster de congreso
author Rosell, Mireia
Rodríguez-Lumbreras, Luis A.
Fernández-Recio, Juan
spellingShingle Rosell, Mireia
Rodríguez-Lumbreras, Luis A.
Fernández-Recio, Juan
Assembly prediction in CASP14 with pyDock ab initio docking and scoring
author_facet Rosell, Mireia
Rodríguez-Lumbreras, Luis A.
Fernández-Recio, Juan
author_sort Rosell, Mireia
title Assembly prediction in CASP14 with pyDock ab initio docking and scoring
title_short Assembly prediction in CASP14 with pyDock ab initio docking and scoring
title_full Assembly prediction in CASP14 with pyDock ab initio docking and scoring
title_fullStr Assembly prediction in CASP14 with pyDock ab initio docking and scoring
title_full_unstemmed Assembly prediction in CASP14 with pyDock ab initio docking and scoring
title_sort assembly prediction in casp14 with pydock ab initio docking and scoring
publishDate 2020-11-30
url http://hdl.handle.net/10261/232407
work_keys_str_mv AT rosellmireia assemblypredictionincasp14withpydockabinitiodockingandscoring
AT rodriguezlumbrerasluisa assemblypredictionincasp14withpydockabinitiodockingandscoring
AT fernandezreciojuan assemblypredictionincasp14withpydockabinitiodockingandscoring
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