Assembly prediction in CASP14 with pyDock ab initio docking and scoring
Trabajo presentado en 14th Community Wide Experiment on the Critical Assessment of Techniques for Protein Structure Prediction CASP14, celebrado online entre los meses de mayo y septiembre de 2020
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dig-icvv-es-10261-2324072022-12-23T14:12:49Z Assembly prediction in CASP14 with pyDock ab initio docking and scoring Rosell, Mireia Rodríguez-Lumbreras, Luis A. Fernández-Recio, Juan Trabajo presentado en 14th Community Wide Experiment on the Critical Assessment of Techniques for Protein Structure Prediction CASP14, celebrado online entre los meses de mayo y septiembre de 2020 In the past 3rd common CASP-CAPRI Assembly Prediction challenge, our modeling approach, integrating ab initio docking, template-based modeling, distance-based restraints, low-resolution structural data and symmetry constraints, yielded excellent performance, ranking 2nd among CAPRI predictors, and 1st among CAPRI scorers1. Here we describe our participation in the CASP14 Assembly category, as part of the 4th common CASP-CAPRI Assembly Prediction challenge (CAPRI Round 50). We have participated as human predictors, human scorers, and server scorers, in all the 18 proposed targets, consisting in four hetero-dimers (A1B1), six homodimers (A2), two homo-trimers (A3), two homo-tetramers (A4), one hetero-nonamer (A3B3C3), one homo-20mer (A20), one hetero-27mer (A6B3C12D6), and one homo-240mer (A240). 2021-03-03T11:30:32Z 2021-03-03T11:30:32Z 2020-11-30 2021-03-03T11:30:32Z póster de congreso http://purl.org/coar/resource_type/c_6670 CASP14 (2020) http://hdl.handle.net/10261/232407 Sí open |
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Trabajo presentado en 14th Community Wide Experiment on the Critical Assessment of Techniques for Protein Structure Prediction CASP14, celebrado online entre los meses de mayo y septiembre de 2020 |
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póster de congreso |
author |
Rosell, Mireia Rodríguez-Lumbreras, Luis A. Fernández-Recio, Juan |
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Rosell, Mireia Rodríguez-Lumbreras, Luis A. Fernández-Recio, Juan Assembly prediction in CASP14 with pyDock ab initio docking and scoring |
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Rosell, Mireia Rodríguez-Lumbreras, Luis A. Fernández-Recio, Juan |
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Rosell, Mireia |
title |
Assembly prediction in CASP14 with pyDock ab initio docking and scoring |
title_short |
Assembly prediction in CASP14 with pyDock ab initio docking and scoring |
title_full |
Assembly prediction in CASP14 with pyDock ab initio docking and scoring |
title_fullStr |
Assembly prediction in CASP14 with pyDock ab initio docking and scoring |
title_full_unstemmed |
Assembly prediction in CASP14 with pyDock ab initio docking and scoring |
title_sort |
assembly prediction in casp14 with pydock ab initio docking and scoring |
publishDate |
2020-11-30 |
url |
http://hdl.handle.net/10261/232407 |
work_keys_str_mv |
AT rosellmireia assemblypredictionincasp14withpydockabinitiodockingandscoring AT rodriguezlumbrerasluisa assemblypredictionincasp14withpydockabinitiodockingandscoring AT fernandezreciojuan assemblypredictionincasp14withpydockabinitiodockingandscoring |
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