Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome

Ferrera, Isabel; Auladell Martin, Adria; Balagué, Vanessa; Reñé, Albert; Garcés, Esther; Massana, Ramon; Gasol, Josep M.; Agencia Estatal de Investigación (España)

Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome

15 pages, 5 figures, 1 table, supporting information https://doi.org/10.1111/1758-2229.13299.-- Data Availability: The data that support the findings of this study are openly available in the NCBI repository at https://www.ncbi.nlm.nih.gov/bioproject/PRJEB38773. All code is available on GitHub: https://github.com/adriaaulaICM/bbmo_timeseries_fraction

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Bibliographic Details
Main Authors:	Ferrera, Isabel, Auladell Martin, Adria, Balagué, Vanessa, Reñé, Albert, Garcés, Esther, Massana, Ramon, Gasol, Josep M.
Other Authors:	Agencia Estatal de Investigación (España)
Format:	artículo biblioteca
Language:	English
Published:	John Wiley & Sons 2024-08
Subjects:	Conserve and sustainably use the oceans, seas and marine resources for sustainable development,
Online Access:	http://hdl.handle.net/10261/366407 http://dx.doi.org/10.13039/501100004837 http://dx.doi.org/10.13039/501100011033
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record_format	koha
institution	ICM ES
collection	DSpace
country	España
countrycode	ES
component	Bibliográfico
access	En linea
databasecode	dig-icm-es
tag	biblioteca
region	Europa del Sur
libraryname	Biblioteca del ICM España
language	English
topic	Conserve and sustainably use the oceans, seas and marine resources for sustainable development Conserve and sustainably use the oceans, seas and marine resources for sustainable development
spellingShingle	Conserve and sustainably use the oceans, seas and marine resources for sustainable development Conserve and sustainably use the oceans, seas and marine resources for sustainable development Ferrera, Isabel Auladell Martin, Adria Balagué, Vanessa Reñé, Albert Garcés, Esther Massana, Ramon Gasol, Josep M. Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome
description	15 pages, 5 figures, 1 table, supporting information https://doi.org/10.1111/1758-2229.13299.-- Data Availability: The data that support the findings of this study are openly available in the NCBI repository at https://www.ncbi.nlm.nih.gov/bioproject/PRJEB38773. All code is available on GitHub: https://github.com/adriaaulaICM/bbmo_timeseries_fraction
author2	Agencia Estatal de Investigación (España)
author_facet	Agencia Estatal de Investigación (España) Ferrera, Isabel Auladell Martin, Adria Balagué, Vanessa Reñé, Albert Garcés, Esther Massana, Ramon Gasol, Josep M.
format	artículo
topic_facet	Conserve and sustainably use the oceans, seas and marine resources for sustainable development
author	Ferrera, Isabel Auladell Martin, Adria Balagué, Vanessa Reñé, Albert Garcés, Esther Massana, Ramon Gasol, Josep M.
author_sort	Ferrera, Isabel
title	Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome
title_short	Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome
title_full	Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome
title_fullStr	Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome
title_full_unstemmed	Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome
title_sort	seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome
publisher	John Wiley & Sons
publishDate	2024-08
url	http://hdl.handle.net/10261/366407 http://dx.doi.org/10.13039/501100004837 http://dx.doi.org/10.13039/501100011033
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spelling	dig-icm-es-10261-3664072024-09-04T13:51:44Z Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome Ferrera, Isabel Auladell Martin, Adria Balagué, Vanessa Reñé, Albert Garcés, Esther Massana, Ramon Gasol, Josep M. Agencia Estatal de Investigación (España) Ministerio de Ciencia e Innovación (España) CSIC - Unidad de Recursos de Información Científica para la Investigación (URICI) Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72] Conserve and sustainably use the oceans, seas and marine resources for sustainable development 15 pages, 5 figures, 1 table, supporting information https://doi.org/10.1111/1758-2229.13299.-- Data Availability: The data that support the findings of this study are openly available in the NCBI repository at https://www.ncbi.nlm.nih.gov/bioproject/PRJEB38773. All code is available on GitHub: https://github.com/adriaaulaICM/bbmo_timeseries_fraction Marine microbial communities differ genetically, metabolically, and ecologically according to their lifestyle, and they may respond differently to environmental changes. In this study, we investigated the seasonal dynamics of bacterial assemblies in the free-living (FL) and particle-associated (PA) fractions across a span of 6 years in the Blanes Bay Microbial Observatory in the Northwestern Mediterranean. Both lifestyles showed marked seasonality. The trends in alpha diversity were similar, with lower values in spring–summer than in autumn-winter. Samples from both fractions were grouped seasonally and the percentage of community variability explained by the measured environmental variables was comparable (32% in FL and 31% in PA). Canonical analyses showed that biotic interactions were determinants of bacterioplankton dynamics and that their relevance varies depending on lifestyles. Time-decay curves confirmed a high degree of predictability in both fractions. Yet, ‘seasonal’ Amplicon Sequence Variants (ASVs) (as defined by Lomb Scargle time series analysis) in the PA communities represented 46% of the total relative abundance while these accounted for 30% in the FL fraction. These results demonstrate that bacteria inhabiting both fractions exhibit marked seasonality, highlighting the importance of accounting for both lifestyles to fully comprehend the dynamics of marine prokaryotic communities This work was supported by grants MICOLOR (PID2021-125469NB-C31) to JMG, SMART (PID2020-112978GB-I00) to EG, DIVAS (PID2019-108457RB-I00) to RM, and ECLIPSE (PID2019-110128RB-I00) to IF, all funded by the Agencia Estatal de Investigación from the Spanish Ministry of Science and Innovation. Authors from the ICM also had the institutional support of the Severo Ochoa Centre of Excellence (CEX2019-000928-S). We acknowledge support of the publication fee by the CSIC Open Access Publication Support Initiative Peer reviewed 2024-08-26T10:41:12Z 2024-08-26T10:41:12Z 2024-08 artículo http://purl.org/coar/resource_type/c_6501 Environmental Microbiology Reports 16(4): e13299 (2024) CEX2019-000928-S http://hdl.handle.net/10261/366407 10.1111/1758-2229.13299 1758-2229 http://dx.doi.org/10.13039/501100004837 http://dx.doi.org/10.13039/501100011033 en #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2021-2023/PID2021-125469NB-C31/ES/COLONIZACION MICROBIANA DE LAS PARTICULAS OCEANICAS: DE LA COMPRENSION MECANISTICA A LOS PATRONES GLOBALES : OCEANOGRAFIA MICROBIANA Y LA VIDA EN LAS PARTICULAS/ info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2020-112978GB-I00/ES/REPARTO DE RECURSOS POR ESPECIALIZACION EN PARASITOS MARINOS/ info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2019-108457RB-I00/ES/PATRONES TEMPORALES DE LOS VIRUS PLANCTONICOS EN UN SISTEMA COSTERO OLIGOTROFICO/ info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2019-110128RB-I00/ES/ECOLOGIA DE BACTERIAS FOTOHETEROTROFICAS MARINAS Y SU RELACION CON LAS COMUNIDADES DE FITOPLANCTON/ Publisher's version https://doi.org/10.1111/1758-2229.13299 Sí open John Wiley & Sons

Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome

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