Ocean-wide comparisons of mesopelagic planktonic community structures

Ocean-wide comparisons of mesopelagic planktonic community structures

This article is contribution number 145 of Tara Oceans.-- 11 pages, 5 figures, 3 tables, supplementary data https://doi.org/10.1038/s43705-023-00279-9.-- Data Availability: All data analyzed during this study are included in this published article in the Supplementary Information file

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Main Authors: Rigonato, Janaina, Budinich, Marko, Murillo, Alejandro A., Brandão, Manoela C., Pierella Karlusich, Juan J., Soviadan, Yawouvi Dodji, Gregory, Ann C., Endo, Hisashi, Kokoszka, Florian, Vik, Dean, Henry, Nicolas, Frémont, Paul, Labadie, Karine, Zayed, Ahmed A., Dimier, Céline, Picheral, Marc, Searson, Sarah, Poulain, Julie, Kandels‐Lewis, Stefanie, Pesant, Stéphane, Karsenti, Eric, Tara Oceans Coordinators, Acinas, Silvia G., Bork, Peer, Bowler, Chris, Vargas, Colomban de, Eveillard, Damien, Gehlen, Marion, Iudicone, Daniele, Lombard, Fabien, Ogata, Hiroyuki, Stemmann, Lars, Sullivan, Matthew B., Sunagawa, Shinichi, Wincker, Patrick, Chaffron, Samuel, Jaillon, Olivier
Other Authors: Fonds Français pour l'Environnement Mondial
Format: artículo biblioteca
Language:English
Published: International Society for Microbial Ecology 2023-12
Subjects:Conserve and sustainably use the oceans, seas and marine resources for sustainable development,
Online Access:http://hdl.handle.net/10261/354941
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id dig-icm-es-10261-354941
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institution ICM ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-icm-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del ICM España
language English
topic Conserve and sustainably use the oceans, seas and marine resources for sustainable development
Conserve and sustainably use the oceans, seas and marine resources for sustainable development
spellingShingle Conserve and sustainably use the oceans, seas and marine resources for sustainable development
Conserve and sustainably use the oceans, seas and marine resources for sustainable development
Rigonato, Janaina
Budinich, Marko
Murillo, Alejandro A.
Brandão, Manoela C.
Pierella Karlusich, Juan J.
Soviadan, Yawouvi Dodji
Gregory, Ann C.
Endo, Hisashi
Kokoszka, Florian
Vik, Dean
Henry, Nicolas
Frémont, Paul
Labadie, Karine
Zayed, Ahmed A.
Dimier, Céline
Picheral, Marc
Searson, Sarah
Poulain, Julie
Kandels‐Lewis, Stefanie
Pesant, Stéphane
Karsenti, Eric
Tara Oceans Coordinators
Acinas, Silvia G.
Bork, Peer
Bowler, Chris
Vargas, Colomban de
Eveillard, Damien
Gehlen, Marion
Iudicone, Daniele
Lombard, Fabien
Ogata, Hiroyuki
Stemmann, Lars
Sullivan, Matthew B.
Sunagawa, Shinichi
Wincker, Patrick
Chaffron, Samuel
Jaillon, Olivier
Ocean-wide comparisons of mesopelagic planktonic community structures
description This article is contribution number 145 of Tara Oceans.-- 11 pages, 5 figures, 3 tables, supplementary data https://doi.org/10.1038/s43705-023-00279-9.-- Data Availability: All data analyzed during this study are included in this published article in the Supplementary Information file
author2 Fonds Français pour l'Environnement Mondial
author_facet Fonds Français pour l'Environnement Mondial
Rigonato, Janaina
Budinich, Marko
Murillo, Alejandro A.
Brandão, Manoela C.
Pierella Karlusich, Juan J.
Soviadan, Yawouvi Dodji
Gregory, Ann C.
Endo, Hisashi
Kokoszka, Florian
Vik, Dean
Henry, Nicolas
Frémont, Paul
Labadie, Karine
Zayed, Ahmed A.
Dimier, Céline
Picheral, Marc
Searson, Sarah
Poulain, Julie
Kandels‐Lewis, Stefanie
Pesant, Stéphane
Karsenti, Eric
Tara Oceans Coordinators
Acinas, Silvia G.
Bork, Peer
Bowler, Chris
Vargas, Colomban de
Eveillard, Damien
Gehlen, Marion
Iudicone, Daniele
Lombard, Fabien
Ogata, Hiroyuki
Stemmann, Lars
Sullivan, Matthew B.
Sunagawa, Shinichi
Wincker, Patrick
Chaffron, Samuel
Jaillon, Olivier
format artículo
topic_facet Conserve and sustainably use the oceans, seas and marine resources for sustainable development
author Rigonato, Janaina
Budinich, Marko
Murillo, Alejandro A.
Brandão, Manoela C.
Pierella Karlusich, Juan J.
Soviadan, Yawouvi Dodji
Gregory, Ann C.
Endo, Hisashi
Kokoszka, Florian
Vik, Dean
Henry, Nicolas
Frémont, Paul
Labadie, Karine
Zayed, Ahmed A.
Dimier, Céline
Picheral, Marc
Searson, Sarah
Poulain, Julie
Kandels‐Lewis, Stefanie
Pesant, Stéphane
Karsenti, Eric
Tara Oceans Coordinators
Acinas, Silvia G.
Bork, Peer
Bowler, Chris
Vargas, Colomban de
Eveillard, Damien
Gehlen, Marion
Iudicone, Daniele
Lombard, Fabien
Ogata, Hiroyuki
Stemmann, Lars
Sullivan, Matthew B.
Sunagawa, Shinichi
Wincker, Patrick
Chaffron, Samuel
Jaillon, Olivier
author_sort Rigonato, Janaina
title Ocean-wide comparisons of mesopelagic planktonic community structures
title_short Ocean-wide comparisons of mesopelagic planktonic community structures
title_full Ocean-wide comparisons of mesopelagic planktonic community structures
title_fullStr Ocean-wide comparisons of mesopelagic planktonic community structures
title_full_unstemmed Ocean-wide comparisons of mesopelagic planktonic community structures
title_sort ocean-wide comparisons of mesopelagic planktonic community structures
publisher International Society for Microbial Ecology
publishDate 2023-12
url http://hdl.handle.net/10261/354941
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spelling dig-icm-es-10261-3549412024-04-25T10:41:03Z Ocean-wide comparisons of mesopelagic planktonic community structures Rigonato, Janaina Budinich, Marko Murillo, Alejandro A. Brandão, Manoela C. Pierella Karlusich, Juan J. Soviadan, Yawouvi Dodji Gregory, Ann C. Endo, Hisashi Kokoszka, Florian Vik, Dean Henry, Nicolas Frémont, Paul Labadie, Karine Zayed, Ahmed A. Dimier, Céline Picheral, Marc Searson, Sarah Poulain, Julie Kandels‐Lewis, Stefanie Pesant, Stéphane Karsenti, Eric Tara Oceans Coordinators Acinas, Silvia G. Bork, Peer Bowler, Chris Vargas, Colomban de Eveillard, Damien Gehlen, Marion Iudicone, Daniele Lombard, Fabien Ogata, Hiroyuki Stemmann, Lars Sullivan, Matthew B. Sunagawa, Shinichi Wincker, Patrick Chaffron, Samuel Jaillon, Olivier Fonds Français pour l'Environnement Mondial Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Brasil) European Commission Centre National de la Recherche Scientifique (France) European Molecular Biology Laboratory Ministère de la Recherche et des Technologies (France) Agencia Estatal de Investigación (España) Conserve and sustainably use the oceans, seas and marine resources for sustainable development This article is contribution number 145 of Tara Oceans.-- 11 pages, 5 figures, 3 tables, supplementary data https://doi.org/10.1038/s43705-023-00279-9.-- Data Availability: All data analyzed during this study are included in this published article in the Supplementary Information file For decades, marine plankton have been investigated for their capacity to modulate biogeochemical cycles and provide fishery resources. Between the sunlit (epipelagic) layer and the deep dark waters, lies a vast and heterogeneous part of the ocean: the mesopelagic zone. How plankton composition is shaped by environment has been well-explored in the epipelagic but much less in the mesopelagic ocean. Here, we conducted comparative analyses of trans-kingdom community assemblages thriving in the mesopelagic oxygen minimum zone (OMZ), mesopelagic oxic, and their epipelagic counterparts. We identified nine distinct types of intermediate water masses that correlate with variation in mesopelagic community composition. Furthermore, oxygen, NO3− and particle flux together appeared as the main drivers governing these communities. Novel taxonomic signatures emerged from OMZ while a global co-occurrence network analysis showed that about 70% of the abundance of mesopelagic plankton groups is organized into three community modules. One module gathers prokaryotes, pico-eukaryotes and Nucleo-Cytoplasmic Large DNA Viruses (NCLDV) from oxic regions, and the two other modules are enriched in OMZ prokaryotes and OMZ pico-eukaryotes, respectively. We hypothesize that OMZ conditions led to a diversification of ecological niches, and thus communities, due to selective pressure from limited resources. Our study further clarifies the interplay between environmental factors in the mesopelagic oxic and OMZ, and the compositional features of communities This study is part of the “Ocean Plankton, Climate and Development” project conducted by the Tara Ocean Foundation with the support of the French Facility for the Global Environment (FFEM). JR, MB, AAM, MCB, JJPK and YDS received financial support from FFEM to execute the project. MCB also received financial support from Coordination for the Improvement of Higher Education Personnel of Brazil (CAPES 99999.000487/2016-03). MB and SC received financial support from the H2020 European Commission project AtlantECO (award number 862923). Tara Oceans (which includes both the Tara Oceans and Tara Oceans Polar Circle expeditions) would not exist without the leadership of the Tara Ocean Foundation and the continuous support of 23 institutes (https://fondationtaraocean.org). We further thank the commitment of the following sponsors: CNRS (in particular Groupement de Recherche GDR3280 and the Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans-GOSEE), European Molecular Biology Laboratory (EMBL), Genoscope/CEA, The French Ministry of Research, and the French Government ‘Investissements d’Avenir’ programs OCEANOMICS (ANR- 11-BTBR-0008), FRANCE GENOMIQUE (ANR-10-INBS-09-08), MEMO LIFE (ANR-10-LABX-54), CLIMACLOCK (ANR-20-CE20-0024) and PSL* Research University (ANR-11-IDEX-0001-02). This study benefits from the European Union’s Horizon 2020 Blue Growth research and innovation programme under grant agreement number 862923 (project AtlantECO) With the institutional support of the ‘Severo Ochoa Centre of Excellence’ accreditation (CEX2019-000928-S) Peer reviewed 2024-04-25T10:41:03Z 2024-04-25T10:41:03Z 2023-12 artículo ISME Communications 3(1): 83 (2023) CEX2019-000928-S http://hdl.handle.net/10261/354941 10.1038/s43705-023-00279-9 2730-6151 en #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/EC/H2020/862923 Publisher's version https://doi.org/10.1038/s43705-023-00279-9 Sí open International Society for Microbial Ecology

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