Integrated abundance, cell volume, viability and leucine incorporation rates of prokaryotes in the epipelagic, mesopelagic and bathypelagic layers of the tropical and subtropical Atlantic

This dataset contains the results of the characterisation of the prokaryotic community by flow cytometry and tritiated leucine incorporation from the MAFIA cruise (Migrants and Active Flux In the Atlantic ocean). Samples were collected in the tropical and subtropical Atlantic during the MAFIA cruise (April 2015) on board the BIO Hespérides. Seawater samples were collected at 13 stations (from the Brazilian coast to the Canary Islands), from the surface down to 3500 m, using a General Oceanics oceanographic rosette equipped with 24 l PVC Niskin bottles. Abundance and cell characteristics (high nucleic acid content fraction, cell volume, viability) were based on measurements performed with a FACSCalibur (Becton-Dickinson) flow cytometer. Leucine incorporation rates were estimated with tritiated leucine (Kirchman et al. 1985) using centrifugation and filtration methods (Smith and Azam 1992). The aim of this dataset was to estimate the influence of surface productivity on the standing stock, characteristics and activity (as leucine incorporation) of prokaryotes across the water column

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Bibliographic Details
Main Authors: Gómez-Letona, Markel, Arístegui, Javier, Hernández, Nauzet, Pérez-Lorenzo, María, Álvarez-Salgado, Xosé Antón, Teira, Eva, Sebastián, Marta
Other Authors: European Commission
Format: dataset biblioteca
Language:English
Published: PANGAEA 2022
Subjects:Atlantic, Bathypelagic, Biomass, Cell volume, Cytometry, Deep ocean, Leucine incorporation, Mesopelagic, Microbial community, NADS, Productivity, Prokaryote, Prokaryotic abundance, Viability,
Online Access:http://hdl.handle.net/10261/332767
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/501100004837
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id dig-icm-es-10261-332767
record_format koha
institution ICM ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-icm-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del ICM España
language English
topic Atlantic
Bathypelagic
Biomass
Cell volume
Cytometry
Deep ocean
Leucine incorporation
Mesopelagic
Microbial community
NADS
Productivity
Prokaryote
Prokaryotic abundance
Viability
Atlantic
Bathypelagic
Biomass
Cell volume
Cytometry
Deep ocean
Leucine incorporation
Mesopelagic
Microbial community
NADS
Productivity
Prokaryote
Prokaryotic abundance
Viability
spellingShingle Atlantic
Bathypelagic
Biomass
Cell volume
Cytometry
Deep ocean
Leucine incorporation
Mesopelagic
Microbial community
NADS
Productivity
Prokaryote
Prokaryotic abundance
Viability
Atlantic
Bathypelagic
Biomass
Cell volume
Cytometry
Deep ocean
Leucine incorporation
Mesopelagic
Microbial community
NADS
Productivity
Prokaryote
Prokaryotic abundance
Viability
Gómez-Letona, Markel
Arístegui, Javier
Hernández, Nauzet
Pérez-Lorenzo, María
Álvarez-Salgado, Xosé Antón
Teira, Eva
Sebastián, Marta
Integrated abundance, cell volume, viability and leucine incorporation rates of prokaryotes in the epipelagic, mesopelagic and bathypelagic layers of the tropical and subtropical Atlantic
description This dataset contains the results of the characterisation of the prokaryotic community by flow cytometry and tritiated leucine incorporation from the MAFIA cruise (Migrants and Active Flux In the Atlantic ocean). Samples were collected in the tropical and subtropical Atlantic during the MAFIA cruise (April 2015) on board the BIO Hespérides. Seawater samples were collected at 13 stations (from the Brazilian coast to the Canary Islands), from the surface down to 3500 m, using a General Oceanics oceanographic rosette equipped with 24 l PVC Niskin bottles. Abundance and cell characteristics (high nucleic acid content fraction, cell volume, viability) were based on measurements performed with a FACSCalibur (Becton-Dickinson) flow cytometer. Leucine incorporation rates were estimated with tritiated leucine (Kirchman et al. 1985) using centrifugation and filtration methods (Smith and Azam 1992). The aim of this dataset was to estimate the influence of surface productivity on the standing stock, characteristics and activity (as leucine incorporation) of prokaryotes across the water column
author2 European Commission
author_facet European Commission
Gómez-Letona, Markel
Arístegui, Javier
Hernández, Nauzet
Pérez-Lorenzo, María
Álvarez-Salgado, Xosé Antón
Teira, Eva
Sebastián, Marta
format dataset
topic_facet Atlantic
Bathypelagic
Biomass
Cell volume
Cytometry
Deep ocean
Leucine incorporation
Mesopelagic
Microbial community
NADS
Productivity
Prokaryote
Prokaryotic abundance
Viability
author Gómez-Letona, Markel
Arístegui, Javier
Hernández, Nauzet
Pérez-Lorenzo, María
Álvarez-Salgado, Xosé Antón
Teira, Eva
Sebastián, Marta
author_sort Gómez-Letona, Markel
title Integrated abundance, cell volume, viability and leucine incorporation rates of prokaryotes in the epipelagic, mesopelagic and bathypelagic layers of the tropical and subtropical Atlantic
title_short Integrated abundance, cell volume, viability and leucine incorporation rates of prokaryotes in the epipelagic, mesopelagic and bathypelagic layers of the tropical and subtropical Atlantic
title_full Integrated abundance, cell volume, viability and leucine incorporation rates of prokaryotes in the epipelagic, mesopelagic and bathypelagic layers of the tropical and subtropical Atlantic
title_fullStr Integrated abundance, cell volume, viability and leucine incorporation rates of prokaryotes in the epipelagic, mesopelagic and bathypelagic layers of the tropical and subtropical Atlantic
title_full_unstemmed Integrated abundance, cell volume, viability and leucine incorporation rates of prokaryotes in the epipelagic, mesopelagic and bathypelagic layers of the tropical and subtropical Atlantic
title_sort integrated abundance, cell volume, viability and leucine incorporation rates of prokaryotes in the epipelagic, mesopelagic and bathypelagic layers of the tropical and subtropical atlantic
publisher PANGAEA
publishDate 2022
url http://hdl.handle.net/10261/332767
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/501100004837
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spelling dig-icm-es-10261-3327672023-10-13T11:31:25Z Integrated abundance, cell volume, viability and leucine incorporation rates of prokaryotes in the epipelagic, mesopelagic and bathypelagic layers of the tropical and subtropical Atlantic Gómez-Letona, Markel Arístegui, Javier Hernández, Nauzet Pérez-Lorenzo, María Álvarez-Salgado, Xosé Antón Teira, Eva Sebastián, Marta European Commission Ministerio de Ciencia e Innovación (España) Atlantic Bathypelagic Biomass Cell volume Cytometry Deep ocean Leucine incorporation Mesopelagic Microbial community NADS Productivity Prokaryote Prokaryotic abundance Viability This dataset contains the results of the characterisation of the prokaryotic community by flow cytometry and tritiated leucine incorporation from the MAFIA cruise (Migrants and Active Flux In the Atlantic ocean). Samples were collected in the tropical and subtropical Atlantic during the MAFIA cruise (April 2015) on board the BIO Hespérides. Seawater samples were collected at 13 stations (from the Brazilian coast to the Canary Islands), from the surface down to 3500 m, using a General Oceanics oceanographic rosette equipped with 24 l PVC Niskin bottles. Abundance and cell characteristics (high nucleic acid content fraction, cell volume, viability) were based on measurements performed with a FACSCalibur (Becton-Dickinson) flow cytometer. Leucine incorporation rates were estimated with tritiated leucine (Kirchman et al. 1985) using centrifugation and filtration methods (Smith and Azam 1992). The aim of this dataset was to estimate the influence of surface productivity on the standing stock, characteristics and activity (as leucine incorporation) of prokaryotes across the water column Horizon 2020 (H2020), grant/award no. 817806: Sustainable management of mesopelagic resources; Ministerio de Ciencia e Innovación (MICINN), grant/award no. CTM2012-39587-C04: Migrants and Active Flux In the Atlantic Ocean; Ministerio de Ciencia e Innovación (MICINN), grant/award no. CTM2015-69392-C3: Constraining organic carbon fluxes in an eastern boundary upwelling ecosystem (NW Africa): the role of non-sinking carbon in the context of the biological pump; Ministerio de Ciencia e Innovación (MICINN), grant/award no. CTM2017-83362-R: INTERES: Papel de las interacciones fitoplancton-bacterias en la respuesta del plancton microbiano a la entrada de nutrientes alóctonos; Ministerio de Ciencia e Innovación (MICINN), grant/award no. PID2019-109084RB-C21: Biogeochemical impact of mesoscale and sub-mesoscale processes along the life history of cyclonic and anticyclonic eddies: plankton variability and productivity No 2023-08-08T07:49:18Z 2023-08-08T07:49:18Z 2022 dataset http://purl.org/coar/resource_type/c_ddb1 Gómez-Letona, Markel; Arístegui, Javier; Hernández, Nauzet; Pérez-Lorenzo, María; Álvarez-Salgado, Xosé Antón; Teira, Eva; Sebastián, Marta; 2022; "Integrated abundance, cell volume, viability and leucine incorporation rates of prokaryotes in the epipelagic, mesopelagic and bathypelagic layers of the tropical and subtropical Atlantic [Dataset]"; PANGAEA; https://doi.org/10.1594/PANGAEA.943416 http://hdl.handle.net/10261/332767 10.1594/PANGAEA.943416 http://dx.doi.org/10.13039/501100000780 http://dx.doi.org/10.13039/501100004837 en #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/MINECO//CTM2012-39587-C04-01/ES/MIGRADORES Y FLUJO ACTIVO EN EL OCEANO ATLANTICO/ info:eu-repo/grantAgreement/MINECO//CTM2015-69392-C3-1-R/ES/FLUJOS DE CARBONO EN UN SISTEMA DE AFLORAMIENTO COSTERO (CABO BLANCO, NW DE AFRICA): PAPEL DEL CARBONO DISUELTO Y EN SUSPENSION EN EL CONTEXTO DE LA BOMBA BIOLOGICA/ info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/CTM2017-83362-R/ES/PAPEL DE LAS INTERACCIONES FITOPLANCTON-BACTERIAS EN LA RESPUESTA DEL PLANCTON MICROBIANO A LA ENTRADA DE NUTRIENTES ALOCTONOS/ info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2019-109084RB-C21/ES/IMPACTO BIOGEOQUIMICO DE PROCESOS A MESOESCALA Y SUBMESOESCALA A LO LARGO DEL CICLO DE VIDA DE REMOLINOS CICLONICOS Y ANTICICLONICOS:VARIABILIDAD PLANCTONICA Y PRODUCTIVIDAD/ info:eu-repo/grantAgreement/EC/H2020/ 817806 Gómez-Letona, M et al.; 2022; Abundance, cell volume, biomass, viability and leucine incorporation rates of prokaryotes from the MAFIA cruise to the tropical and subtropical Atlantic in 2015 [Dataset]; PANGAEA; https://doi.org/10.1594/PANGAEA.943417 Gómez-Letona, Markel; Arístegui, Javier; Hernández, Nauzet; Pérez-Lorenzo, María; Álvarez-Salgado, Xosé Antón; Teira, Eva; Sebastián, Marta; 2023; Surface productivity gradients govern changes in the viability of deep ocean prokaryotes across the tropical and subtropical Atlantic; https://doi.org/10.1002/lno.12248; http://hdl.handle.net/10261/286634 https://doi.org/10.1594/PANGAEA.943416 Sí open tab median lat=7.387423; median long=-24.348562; south-bound lat=-13.124000; wet-bound long=-33.958800; north-bound lat=27.404000; east-bound long=-15.946000 start=2015-04-05T00:45:00; end=2015-04-28T20:32:07 PANGAEA