Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean
18 pages, 4 figures, supplemental information https://doi.org/10.1016/j.xgen.2022.100123.-- Data and code availability: • All data our study generated are publicly available at http://www.genoscope.cns.fr/tara/. The link provides access to the 11 raw metagenomic co-assemblies, the FASTA files for 713 MAGs and SAGs, the ∼10 million protein-coding sequences (nucleotides, amino acids and gff format), and the curated DNA-dependent RNA polymerase genes (MAGs and SAGs and METdb transcriptomes). This link also provides access to the supplemental figures and the Supplemental material. Finally, code development within anvi’o for the BUSCO single copy core genes is available at https://github.com/merenlab/anvio. • Original code has been deposited at Zenodo and is publicly available. The accession number is listed in the key resources table. • Any additional information required to reanalyze the data reported in this paper is available from the lead contact upon request
Main Authors: | , , , , , , , , , , , , , , , , , , , |
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Other Authors: | |
Format: | artículo biblioteca |
Language: | English |
Published: |
Cell Press
2022-05
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Subjects: | Planktonic eukaryotes, Genomics metagenomics, Tara Oceans, Anvi’o, Evolution, Functions, Ecology, Conserve and sustainably use the oceans, seas and marine resources for sustainable development, |
Online Access: | http://hdl.handle.net/10261/304603 |
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