Roadmap for naming uncultivated Archaea and Bacteria
8 pages, 2 figures, 1 table, 2 boxes, supplementary information https://doi.org/10.1038/s41564-020-0733-x.-- Author Correction: Roadmap for naming uncultivated Archaea and Bacteria: n the version of this Consensus Statement originally published, Pablo Yarza was mistakenly not included in the author list. Also, in Supplementary Table 1, Alexander Jaffe was missing from the list of endorsees. These errors have now been corrected and the updated Supplementary Table 1 is available online
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2020-08
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dig-icm-es-10261-2139412022-12-30T10:59:23Z Roadmap for naming uncultivated Archaea and Bacteria Murray, Alison Freudenstein, John Gribaldo, Simonetta Hatzenpichler, Roland Hugenholtz, Philip Kämpfer, Peter Konstantinidis, Konstantinos T. Lane, Christopher E. Papke, R. Thane Parks, Donovan H. Rosselló-Mora, Ramón Stott, Matthew B. Sutcliffe, Iain Thrash, J. Cameron Venter, Stephanus N. Whitman, William B. Acinas, Silvia G. Amann, Rudolf Anantharaman, Karthik Armengaud, Jean Baker, Brett J. Barco, Roman A. Bode, Helge B. Boyd, Eric S. Brady, Carrie L. Carini, Paul Chain, Patrick S.G. Colman, Daniel R. DeAngelis, Kristen M. Ríos, Asunción de los Estrada-de los Santos, Paulina Dunlap, Christopher A. Eisen, Jonathan A. Emerson, David Ettema, Thijs J.G. Eveillard, Damien Girguis, Peter R. Hentschel, Ute Hollibaugh, James T. Hug, Laura A. Inskeep, William P. Ivanova, Elena P. Klenk, Hans Peter Li, Wen-Jun Lloyd, Karen G. Löffler, Frank Makhalanyane, Thulani P. Moser, Duane P. Nunoura, Takuro Palmer, Marike Parro-García, Víctor Pedrós-Alió, Carlos Probst, Alexander J. Smits, Theo H.M. Steen, Andrew D. Steenkamp, Emma Spang, Anja Stewart, Frank J. Tiedje, J.M. Vandamme, Peter Wagner, Michael Wang, Feng-Ping Yarza, Pablo Hedlund, Brian P. Reysenbach, A. L. National Science Foundation (US) Agencia Estatal de Investigación (España) 8 pages, 2 figures, 1 table, 2 boxes, supplementary information https://doi.org/10.1038/s41564-020-0733-x.-- Author Correction: Roadmap for naming uncultivated Archaea and Bacteria: n the version of this Consensus Statement originally published, Pablo Yarza was mistakenly not included in the author list. Also, in Supplementary Table 1, Alexander Jaffe was missing from the list of endorsees. These errors have now been corrected and the updated Supplementary Table 1 is available online The assembly of single-amplified genomes (SAGs) and metagenome-assembled genomes (MAGs) has led to a surge in genome-based discoveries of members affiliated with Archaea and Bacteria, bringing with it a need to develop guidelines for nomenclature of uncultivated microorganisms. The International Code of Nomenclature of Prokaryotes (ICNP) only recognizes cultures as ‘type material’, thereby preventing the naming of uncultivated organisms. In this Consensus Statement, we propose two potential paths to solve this nomenclatural conundrum. One option is the adoption of previously proposed modifications to the ICNP to recognize DNA sequences as acceptable type material; the other option creates a nomenclatural code for uncultivated Archaea and Bacteria that could eventually be merged with the ICNP in the future. Regardless of the path taken, we believe that action is needed now within the scientific community to develop consistent rules for nomenclature of uncultivated taxa in order to provide clarity and stability, and to effectively communicate microbial diversity Support for this effort was provided by the National Science Foundation (grant no. DEB-1841658). We extend deep appreciation to all who attended the Microbial Taxonomy 2018 seminars, the Microbial Systematics for the Next Decade workshop held in Hood River, Oregon, USA, in October 2018, and those that participated in subsequent With the funding support of the ‘Severo Ochoa Centre of Excellence’ accreditation (CEX2019-000928-S), of the Spanish Research Agency (AEI) 2020-06-10T07:51:00Z 2020-06-10T07:51:00Z 2020-08 2020-06-10T07:51:00Z artículo http://purl.org/coar/resource_type/c_6501 e-issn: 2058-5276 Nature Microbiology 5(8): 987-994 (2020) CEX2019-000928-S http://hdl.handle.net/10261/213941 10.1038/s41564-020-0733-x http://dx.doi.org/10.13039/100000001 http://dx.doi.org/10.13039/501100011033 32514073 Publisher's version https://doi.org/10.1038/s41564-020-0733-x Sí open Springer Nature |
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8 pages, 2 figures, 1 table, 2 boxes, supplementary information https://doi.org/10.1038/s41564-020-0733-x.-- Author Correction: Roadmap for naming uncultivated Archaea and Bacteria: n the version of this Consensus Statement originally published, Pablo Yarza was mistakenly not included in the author list. Also, in Supplementary Table 1, Alexander Jaffe was missing from the list of endorsees. These errors have now been corrected and the updated Supplementary Table 1 is available online |
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National Science Foundation (US) Murray, Alison Freudenstein, John Gribaldo, Simonetta Hatzenpichler, Roland Hugenholtz, Philip Kämpfer, Peter Konstantinidis, Konstantinos T. Lane, Christopher E. Papke, R. Thane Parks, Donovan H. Rosselló-Mora, Ramón Stott, Matthew B. Sutcliffe, Iain Thrash, J. Cameron Venter, Stephanus N. Whitman, William B. Acinas, Silvia G. Amann, Rudolf Anantharaman, Karthik Armengaud, Jean Baker, Brett J. Barco, Roman A. Bode, Helge B. Boyd, Eric S. Brady, Carrie L. Carini, Paul Chain, Patrick S.G. Colman, Daniel R. DeAngelis, Kristen M. Ríos, Asunción de los Estrada-de los Santos, Paulina Dunlap, Christopher A. Eisen, Jonathan A. Emerson, David Ettema, Thijs J.G. Eveillard, Damien Girguis, Peter R. Hentschel, Ute Hollibaugh, James T. Hug, Laura A. Inskeep, William P. Ivanova, Elena P. Klenk, Hans Peter Li, Wen-Jun Lloyd, Karen G. Löffler, Frank Makhalanyane, Thulani P. Moser, Duane P. Nunoura, Takuro Palmer, Marike Parro-García, Víctor Pedrós-Alió, Carlos Probst, Alexander J. Smits, Theo H.M. Steen, Andrew D. Steenkamp, Emma Spang, Anja Stewart, Frank J. Tiedje, J.M. Vandamme, Peter Wagner, Michael Wang, Feng-Ping Yarza, Pablo Hedlund, Brian P. Reysenbach, A. L. |
| format |
artículo |
| author |
Murray, Alison Freudenstein, John Gribaldo, Simonetta Hatzenpichler, Roland Hugenholtz, Philip Kämpfer, Peter Konstantinidis, Konstantinos T. Lane, Christopher E. Papke, R. Thane Parks, Donovan H. Rosselló-Mora, Ramón Stott, Matthew B. Sutcliffe, Iain Thrash, J. Cameron Venter, Stephanus N. Whitman, William B. Acinas, Silvia G. Amann, Rudolf Anantharaman, Karthik Armengaud, Jean Baker, Brett J. Barco, Roman A. Bode, Helge B. Boyd, Eric S. Brady, Carrie L. Carini, Paul Chain, Patrick S.G. Colman, Daniel R. DeAngelis, Kristen M. Ríos, Asunción de los Estrada-de los Santos, Paulina Dunlap, Christopher A. Eisen, Jonathan A. Emerson, David Ettema, Thijs J.G. Eveillard, Damien Girguis, Peter R. Hentschel, Ute Hollibaugh, James T. Hug, Laura A. Inskeep, William P. Ivanova, Elena P. Klenk, Hans Peter Li, Wen-Jun Lloyd, Karen G. Löffler, Frank Makhalanyane, Thulani P. Moser, Duane P. Nunoura, Takuro Palmer, Marike Parro-García, Víctor Pedrós-Alió, Carlos Probst, Alexander J. Smits, Theo H.M. Steen, Andrew D. Steenkamp, Emma Spang, Anja Stewart, Frank J. Tiedje, J.M. Vandamme, Peter Wagner, Michael Wang, Feng-Ping Yarza, Pablo Hedlund, Brian P. Reysenbach, A. L. |
| spellingShingle |
Murray, Alison Freudenstein, John Gribaldo, Simonetta Hatzenpichler, Roland Hugenholtz, Philip Kämpfer, Peter Konstantinidis, Konstantinos T. Lane, Christopher E. Papke, R. Thane Parks, Donovan H. Rosselló-Mora, Ramón Stott, Matthew B. Sutcliffe, Iain Thrash, J. Cameron Venter, Stephanus N. Whitman, William B. Acinas, Silvia G. Amann, Rudolf Anantharaman, Karthik Armengaud, Jean Baker, Brett J. Barco, Roman A. Bode, Helge B. Boyd, Eric S. Brady, Carrie L. Carini, Paul Chain, Patrick S.G. Colman, Daniel R. DeAngelis, Kristen M. Ríos, Asunción de los Estrada-de los Santos, Paulina Dunlap, Christopher A. Eisen, Jonathan A. Emerson, David Ettema, Thijs J.G. Eveillard, Damien Girguis, Peter R. Hentschel, Ute Hollibaugh, James T. Hug, Laura A. Inskeep, William P. Ivanova, Elena P. Klenk, Hans Peter Li, Wen-Jun Lloyd, Karen G. Löffler, Frank Makhalanyane, Thulani P. Moser, Duane P. Nunoura, Takuro Palmer, Marike Parro-García, Víctor Pedrós-Alió, Carlos Probst, Alexander J. Smits, Theo H.M. Steen, Andrew D. Steenkamp, Emma Spang, Anja Stewart, Frank J. Tiedje, J.M. Vandamme, Peter Wagner, Michael Wang, Feng-Ping Yarza, Pablo Hedlund, Brian P. Reysenbach, A. L. Roadmap for naming uncultivated Archaea and Bacteria |
| author_sort |
Murray, Alison |
| title |
Roadmap for naming uncultivated Archaea and Bacteria |
| title_short |
Roadmap for naming uncultivated Archaea and Bacteria |
| title_full |
Roadmap for naming uncultivated Archaea and Bacteria |
| title_fullStr |
Roadmap for naming uncultivated Archaea and Bacteria |
| title_full_unstemmed |
Roadmap for naming uncultivated Archaea and Bacteria |
| title_sort |
roadmap for naming uncultivated archaea and bacteria |
| publisher |
Springer Nature |
| publishDate |
2020-08 |
| url |
http://hdl.handle.net/10261/213941 http://dx.doi.org/10.13039/100000001 http://dx.doi.org/10.13039/501100011033 |
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