Phenotypic and genomic differences among S. cerevisiae strains in nitrogen requirements during wine fermentations

Nitrogen requirements by S. cerevisiae during wine fermentation are highly strain-dependent. Different approaches were applied to explore the nitrogen requirements of 28 wine yeast strains. Based on the growth and fermentation behaviour displayed at different nitrogen concentrations, high and low nitrogen-demanding strains were selected and further verified by competition fermentation. Biomass production with increasing nitrogen concentrations in the exponential fermentation phase was analysed by chemostat cultures. Low nitrogen-demanding (LND) strains produced a larger amount of biomass in nitrogen-limited synthetic grape musts, whereas high nitrogen-demanding (HND) strains achieved a bigger biomass yield when the YAN concentration was above 100 mg/L. Constant rate fermentation was carried out with both strains to determine the amount of nitrogen required to maintain the highest fermentation rate. Large differences appeared in the analysis of the genomes of low and high-nitrogen demanding strains showed for heterozygosity and the amino acid substitutions between orthologous proteins, with nitrogen recycling system genes showing the widest amino acid divergences. The CRISPR/Cas9-mediated genome modification method was used to validate the involvement of GCN1 in the yeast strain nitrogen needs. However, the allele swapping of gene GCN1 from low nitrogen-demanding strains to high nitrogen-demanding strains did not significantly influence the fermentation rate.

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Bibliographic Details
Main Authors: Su, Ying, Macías, Laura G., Heras, José María, Querol, Amparo, Guillamón, José Manuel
Other Authors: Generalitat Valenciana
Format: artículo biblioteca
Language:English
Published: Elsevier 2020-12-27
Subjects:S. cerevisiae, Nitrogen requirement, Genetic basis, Biomass production, Competition experiments, CRISPR/Cas9,
Online Access:http://hdl.handle.net/10261/226988
http://dx.doi.org/10.13039/501100003359
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spelling dig-iata-es-10261-2269882021-12-27T05:30:48Z Phenotypic and genomic differences among S. cerevisiae strains in nitrogen requirements during wine fermentations Su, Ying Macías, Laura G. Heras, José María Querol, Amparo Guillamón, José Manuel Generalitat Valenciana S. cerevisiae Nitrogen requirement Genetic basis Biomass production Competition experiments CRISPR/Cas9 Nitrogen requirements by S. cerevisiae during wine fermentation are highly strain-dependent. Different approaches were applied to explore the nitrogen requirements of 28 wine yeast strains. Based on the growth and fermentation behaviour displayed at different nitrogen concentrations, high and low nitrogen-demanding strains were selected and further verified by competition fermentation. Biomass production with increasing nitrogen concentrations in the exponential fermentation phase was analysed by chemostat cultures. Low nitrogen-demanding (LND) strains produced a larger amount of biomass in nitrogen-limited synthetic grape musts, whereas high nitrogen-demanding (HND) strains achieved a bigger biomass yield when the YAN concentration was above 100 mg/L. Constant rate fermentation was carried out with both strains to determine the amount of nitrogen required to maintain the highest fermentation rate. Large differences appeared in the analysis of the genomes of low and high-nitrogen demanding strains showed for heterozygosity and the amino acid substitutions between orthologous proteins, with nitrogen recycling system genes showing the widest amino acid divergences. The CRISPR/Cas9-mediated genome modification method was used to validate the involvement of GCN1 in the yeast strain nitrogen needs. However, the allele swapping of gene GCN1 from low nitrogen-demanding strains to high nitrogen-demanding strains did not significantly influence the fermentation rate. The authors thank Lallemand Inc. For supplying the strains and funding the project. This project has been also partially funding by the grants GRISOLIA/2015/030 and PROMETEO/2020/014, both from Generalitat Valenciana, awarded to YS and AQ respectively. Peer reviewed 2021-01-19T06:39:49Z 2021-01-19T06:39:49Z 2020-12-27 artículo http://purl.org/coar/resource_type/c_6501 Food Microbiology 96: 103685 (2021) 0740-0020 http://hdl.handle.net/10261/226988 10.1016/j.fm.2020.103685 http://dx.doi.org/10.13039/501100003359 en Postprint https://doi.org/10.1016/j.fm.2020.103685 Sí open Elsevier
institution IATA ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-iata-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del IATA España
language English
topic S. cerevisiae
Nitrogen requirement
Genetic basis
Biomass production
Competition experiments
CRISPR/Cas9
S. cerevisiae
Nitrogen requirement
Genetic basis
Biomass production
Competition experiments
CRISPR/Cas9
spellingShingle S. cerevisiae
Nitrogen requirement
Genetic basis
Biomass production
Competition experiments
CRISPR/Cas9
S. cerevisiae
Nitrogen requirement
Genetic basis
Biomass production
Competition experiments
CRISPR/Cas9
Su, Ying
Macías, Laura G.
Heras, José María
Querol, Amparo
Guillamón, José Manuel
Phenotypic and genomic differences among S. cerevisiae strains in nitrogen requirements during wine fermentations
description Nitrogen requirements by S. cerevisiae during wine fermentation are highly strain-dependent. Different approaches were applied to explore the nitrogen requirements of 28 wine yeast strains. Based on the growth and fermentation behaviour displayed at different nitrogen concentrations, high and low nitrogen-demanding strains were selected and further verified by competition fermentation. Biomass production with increasing nitrogen concentrations in the exponential fermentation phase was analysed by chemostat cultures. Low nitrogen-demanding (LND) strains produced a larger amount of biomass in nitrogen-limited synthetic grape musts, whereas high nitrogen-demanding (HND) strains achieved a bigger biomass yield when the YAN concentration was above 100 mg/L. Constant rate fermentation was carried out with both strains to determine the amount of nitrogen required to maintain the highest fermentation rate. Large differences appeared in the analysis of the genomes of low and high-nitrogen demanding strains showed for heterozygosity and the amino acid substitutions between orthologous proteins, with nitrogen recycling system genes showing the widest amino acid divergences. The CRISPR/Cas9-mediated genome modification method was used to validate the involvement of GCN1 in the yeast strain nitrogen needs. However, the allele swapping of gene GCN1 from low nitrogen-demanding strains to high nitrogen-demanding strains did not significantly influence the fermentation rate.
author2 Generalitat Valenciana
author_facet Generalitat Valenciana
Su, Ying
Macías, Laura G.
Heras, José María
Querol, Amparo
Guillamón, José Manuel
format artículo
topic_facet S. cerevisiae
Nitrogen requirement
Genetic basis
Biomass production
Competition experiments
CRISPR/Cas9
author Su, Ying
Macías, Laura G.
Heras, José María
Querol, Amparo
Guillamón, José Manuel
author_sort Su, Ying
title Phenotypic and genomic differences among S. cerevisiae strains in nitrogen requirements during wine fermentations
title_short Phenotypic and genomic differences among S. cerevisiae strains in nitrogen requirements during wine fermentations
title_full Phenotypic and genomic differences among S. cerevisiae strains in nitrogen requirements during wine fermentations
title_fullStr Phenotypic and genomic differences among S. cerevisiae strains in nitrogen requirements during wine fermentations
title_full_unstemmed Phenotypic and genomic differences among S. cerevisiae strains in nitrogen requirements during wine fermentations
title_sort phenotypic and genomic differences among s. cerevisiae strains in nitrogen requirements during wine fermentations
publisher Elsevier
publishDate 2020-12-27
url http://hdl.handle.net/10261/226988
http://dx.doi.org/10.13039/501100003359
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