Spatial structure and soil properties shape local community structure of plant-parasitic nematodes in cultivated olive trees in southern Spain

Numerous studies have documented the distribution of plant and animal communities with respect to spatial structure; however, relatively little is known about the involvement of spatial structures in the diversity of soil organisms such as plant-parasitic nematodes (PPN). Host plants such as olive trees are of particular interest because they host a large number of PPN and have a high economic and cultural importance. In this study, we investigated how different aspects of the environment (i.e. the factors soil, above-ground environment, and agricultural management) and spatial structure shaped the variation of species composition (expressed as beta diversity) and species richness of plant-parasitic nematodes infesting the soil rhizosphere in 376 commercial olive orchards in the south of Spain. We used variation partitioning to assess the relative importance of the unique and shared contributions of the factors describing the environment and spatial structure. To identify sites and species of particular interest, we partitioned beta diversity into local and species contributions. Contrary to our expectation that soil and agricultural management would largely determine the community structure of PPN, more than two-thirds of the variation remained unexplained. Spatial structure and soil were the most important factors shaping species richness and beta diversity. Surprisingly, the effects of agricultural management on species richness were lower than expected, and null [or nonexistent, or nonsignificant] on beta diversity. We found relatively high levels of shared contributions of the different factors, especially in combination with spatial structure, indicating the presence of spatial gradients of the variables describing the environmental factors. Species contributions to beta diversity (SCBD) were positively correlated with nematode prevalence and density range; thus, SCBD could be related to the niche position as reported in other ecosystems. Local contributions to beta diversity (LCBD) were mainly related with habitat filtering mechanisms (e.g. soil physiochemical and agronomic management predictors), suggesting a relationship between nematode total biomass and ecological gradients. Overall, we revealed novel insights into the spatial structure of PPN communities and showed that its beta diversity is less structured by spatial and environmental factors compared to other organism types.

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Bibliographic Details
Main Authors: Archidona-Yuste, Antonio, Wiegand, Thosten, Castillo, Pablo, Navas Cortés, Juan Antonio
Other Authors: Ministerio de Economía y Competitividad (España)
Format: artículo biblioteca
Published: Elsevier 2020-01-01
Subjects:Below-ground ecosystems, Soil nematodes, Ecological uniqueness, Beta diversity, Variation partitioning, Olive tree,
Online Access:http://hdl.handle.net/10261/227752
http://dx.doi.org/10.13039/501100003329
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/100005156
http://dx.doi.org/10.13039/501100011011
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id dig-ias-es-10261-227752
record_format koha
institution IAS ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-ias-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del IAS España
topic Below-ground ecosystems
Soil nematodes
Ecological uniqueness
Beta diversity
Variation partitioning
Olive tree
Below-ground ecosystems
Soil nematodes
Ecological uniqueness
Beta diversity
Variation partitioning
Olive tree
spellingShingle Below-ground ecosystems
Soil nematodes
Ecological uniqueness
Beta diversity
Variation partitioning
Olive tree
Below-ground ecosystems
Soil nematodes
Ecological uniqueness
Beta diversity
Variation partitioning
Olive tree
Archidona-Yuste, Antonio
Wiegand, Thosten
Castillo, Pablo
Navas Cortés, Juan Antonio
Spatial structure and soil properties shape local community structure of plant-parasitic nematodes in cultivated olive trees in southern Spain
description Numerous studies have documented the distribution of plant and animal communities with respect to spatial structure; however, relatively little is known about the involvement of spatial structures in the diversity of soil organisms such as plant-parasitic nematodes (PPN). Host plants such as olive trees are of particular interest because they host a large number of PPN and have a high economic and cultural importance. In this study, we investigated how different aspects of the environment (i.e. the factors soil, above-ground environment, and agricultural management) and spatial structure shaped the variation of species composition (expressed as beta diversity) and species richness of plant-parasitic nematodes infesting the soil rhizosphere in 376 commercial olive orchards in the south of Spain. We used variation partitioning to assess the relative importance of the unique and shared contributions of the factors describing the environment and spatial structure. To identify sites and species of particular interest, we partitioned beta diversity into local and species contributions. Contrary to our expectation that soil and agricultural management would largely determine the community structure of PPN, more than two-thirds of the variation remained unexplained. Spatial structure and soil were the most important factors shaping species richness and beta diversity. Surprisingly, the effects of agricultural management on species richness were lower than expected, and null [or nonexistent, or nonsignificant] on beta diversity. We found relatively high levels of shared contributions of the different factors, especially in combination with spatial structure, indicating the presence of spatial gradients of the variables describing the environmental factors. Species contributions to beta diversity (SCBD) were positively correlated with nematode prevalence and density range; thus, SCBD could be related to the niche position as reported in other ecosystems. Local contributions to beta diversity (LCBD) were mainly related with habitat filtering mechanisms (e.g. soil physiochemical and agronomic management predictors), suggesting a relationship between nematode total biomass and ecological gradients. Overall, we revealed novel insights into the spatial structure of PPN communities and showed that its beta diversity is less structured by spatial and environmental factors compared to other organism types.
author2 Ministerio de Economía y Competitividad (España)
author_facet Ministerio de Economía y Competitividad (España)
Archidona-Yuste, Antonio
Wiegand, Thosten
Castillo, Pablo
Navas Cortés, Juan Antonio
format artículo
topic_facet Below-ground ecosystems
Soil nematodes
Ecological uniqueness
Beta diversity
Variation partitioning
Olive tree
author Archidona-Yuste, Antonio
Wiegand, Thosten
Castillo, Pablo
Navas Cortés, Juan Antonio
author_sort Archidona-Yuste, Antonio
title Spatial structure and soil properties shape local community structure of plant-parasitic nematodes in cultivated olive trees in southern Spain
title_short Spatial structure and soil properties shape local community structure of plant-parasitic nematodes in cultivated olive trees in southern Spain
title_full Spatial structure and soil properties shape local community structure of plant-parasitic nematodes in cultivated olive trees in southern Spain
title_fullStr Spatial structure and soil properties shape local community structure of plant-parasitic nematodes in cultivated olive trees in southern Spain
title_full_unstemmed Spatial structure and soil properties shape local community structure of plant-parasitic nematodes in cultivated olive trees in southern Spain
title_sort spatial structure and soil properties shape local community structure of plant-parasitic nematodes in cultivated olive trees in southern spain
publisher Elsevier
publishDate 2020-01-01
url http://hdl.handle.net/10261/227752
http://dx.doi.org/10.13039/501100003329
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/100005156
http://dx.doi.org/10.13039/501100011011
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spelling dig-ias-es-10261-2277522021-01-29T05:01:54Z Spatial structure and soil properties shape local community structure of plant-parasitic nematodes in cultivated olive trees in southern Spain Archidona-Yuste, Antonio Wiegand, Thosten Castillo, Pablo Navas Cortés, Juan Antonio Ministerio de Economía y Competitividad (España) European Commission Junta de Andalucía Alexander von Humboldt Foundation Below-ground ecosystems Soil nematodes Ecological uniqueness Beta diversity Variation partitioning Olive tree Numerous studies have documented the distribution of plant and animal communities with respect to spatial structure; however, relatively little is known about the involvement of spatial structures in the diversity of soil organisms such as plant-parasitic nematodes (PPN). Host plants such as olive trees are of particular interest because they host a large number of PPN and have a high economic and cultural importance. In this study, we investigated how different aspects of the environment (i.e. the factors soil, above-ground environment, and agricultural management) and spatial structure shaped the variation of species composition (expressed as beta diversity) and species richness of plant-parasitic nematodes infesting the soil rhizosphere in 376 commercial olive orchards in the south of Spain. We used variation partitioning to assess the relative importance of the unique and shared contributions of the factors describing the environment and spatial structure. To identify sites and species of particular interest, we partitioned beta diversity into local and species contributions. Contrary to our expectation that soil and agricultural management would largely determine the community structure of PPN, more than two-thirds of the variation remained unexplained. Spatial structure and soil were the most important factors shaping species richness and beta diversity. Surprisingly, the effects of agricultural management on species richness were lower than expected, and null [or nonexistent, or nonsignificant] on beta diversity. We found relatively high levels of shared contributions of the different factors, especially in combination with spatial structure, indicating the presence of spatial gradients of the variables describing the environmental factors. Species contributions to beta diversity (SCBD) were positively correlated with nematode prevalence and density range; thus, SCBD could be related to the niche position as reported in other ecosystems. Local contributions to beta diversity (LCBD) were mainly related with habitat filtering mechanisms (e.g. soil physiochemical and agronomic management predictors), suggesting a relationship between nematode total biomass and ecological gradients. Overall, we revealed novel insights into the spatial structure of PPN communities and showed that its beta diversity is less structured by spatial and environmental factors compared to other organism types. This research was supported by grant AGL2012-37521 from Ministerio de Economía y Competitividad of Spain, grant 219262 ArimNET-ERANET FP7 2012-2015 Project PESTOLIVE and grant P12AGR 1486 Consejería de Economía, Innvovación y Ciencia of the Junta de Andalucía, and Union Europea, Fondo Europeo de Desarrollo regional, ‘Una manera de hacer Europa’. A. Archidona-Yuste was a recipient of research contract BES-2013063495 from Ministerio de Economía y Competitividad, Spain; and at present is a recipient of Humboldt Research Fellowship for Postdoctoral Researchers at Helmholtz Centre for Environmental Research-UFZ, Leipzig, Germany. 2021-01-28T08:10:17Z 2021-01-28T08:10:17Z 2020-01-01 2021-01-28T08:10:18Z artículo http://purl.org/coar/resource_type/c_6501 doi: 10.1016/j.agee.2019.106688 issn: 0167-8809 Agriculture, Ecosystems and Environment 287: 106688 (2020) http://hdl.handle.net/10261/227752 10.1016/j.agee.2019.106688 http://dx.doi.org/10.13039/501100003329 http://dx.doi.org/10.13039/501100000780 http://dx.doi.org/10.13039/100005156 http://dx.doi.org/10.13039/501100011011 #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/EC/FP7/219262 http://doi.org/10.1016/j.agee.2019.106688 Sí none Elsevier