Integrative descriptions and molecular phylogeny of two new needle nematodes of the genus Longidorus (Nematoda: Longidoridae) from Spain

Needle nematodes have an economic importance by causing damage to a wide range of natural and cultivated plants not only by directly feeding on root cells, but also by transmitting plant nepoviruses. Two new Longidorus nematodes, Longidorus oakcrassus n. sp. and Longidorus oakgracilis n. sp., are described and illustrated from populations associated with the rhizosphere of Pyrenean oak (Quercus pyrenaica Wild.) in southern Spain. The taxonomic position of both new species within the genus was assigned using an integrative approach. Morphologically, L. oakcrassus n. sp. is characterized by a female with a large and robust body size (9.2–12.2 mm), lip region anteriorly flattened to slightly rounded and almost continuous or slightly offset by a depression with body contour, ca 25.5–32.0 μm wide, amphidial fovea with slightly asymmetrical lobes, stylet composed by an odontostyle moderately long (110.0–133.5 μm) and odontophore weakly developed, pharynx short ending in a terminal pharyngeal bulb with common arrangement of pharyngeal glands, tail short almost hemispherical shape. Longidorus oakgracilis n. sp. is characterized by having a moderately long and thin female body (5.4–7.9 mm in length), a bluntly-rounded lip region, set off from body contour by a slight depression, amphidial fovea funnel-shaped without lobe, odontostyle moderately long (94.0–106.0 μm), pharyngeal bulb with common arrangement of pharyngeal glands, short tail, bluntly hemispherical. The presence of males is common in both species. Integrative diagnosis was based on molecular data using D2-D3 expansion domains of the 28S rRNA, 18S rRNA, ITS1 rRNA and partial coxI gene sequences and morphology. Although different gene markers show variations in the phylogenetic relationships, phylogeny indicated that L. oakcrassus n. sp. is phylogenetically related with several species described from the Iberian Peninsula, including L. oakgracilis n. sp., which is clustered with L.cf. olegi, L. lusitanicus and L. silvestris.

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Main Authors: Cai, Ruihang, Archidona-Yuste, Antonio, Cantalapiedra-Navarrete, C., Palomares Rius, Juan E., Castillo, Pablo
Other Authors: Consejo Superior de Investigaciones Científicas (España)
Format: artículo biblioteca
Published: Springer Nature 2020-01
Subjects:18S rDNA, 28S rDNA D2-D3, Species description, CoxI, ITS1, Longidorids, Phylogeny, Taxonomy,
Online Access:http://hdl.handle.net/10261/226932
http://dx.doi.org/10.13039/501100011033
http://dx.doi.org/10.13039/100005156
http://dx.doi.org/10.13039/501100004543
http://dx.doi.org/10.13039/501100003339
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spelling dig-ias-es-10261-2269322021-03-06T05:55:52Z Integrative descriptions and molecular phylogeny of two new needle nematodes of the genus Longidorus (Nematoda: Longidoridae) from Spain Cai, Ruihang Archidona-Yuste, Antonio Cantalapiedra-Navarrete, C. Palomares Rius, Juan E. Castillo, Pablo Consejo Superior de Investigaciones Científicas (España) China Scholarship Council Alexander von Humboldt Foundation Agencia Estatal de Investigación (España) Ministerio de Ciencia, Innovación y Universidades (España) 18S rDNA 28S rDNA D2-D3 Species description CoxI ITS1 Longidorids Phylogeny Taxonomy Needle nematodes have an economic importance by causing damage to a wide range of natural and cultivated plants not only by directly feeding on root cells, but also by transmitting plant nepoviruses. Two new Longidorus nematodes, Longidorus oakcrassus n. sp. and Longidorus oakgracilis n. sp., are described and illustrated from populations associated with the rhizosphere of Pyrenean oak (Quercus pyrenaica Wild.) in southern Spain. The taxonomic position of both new species within the genus was assigned using an integrative approach. Morphologically, L. oakcrassus n. sp. is characterized by a female with a large and robust body size (9.2–12.2 mm), lip region anteriorly flattened to slightly rounded and almost continuous or slightly offset by a depression with body contour, ca 25.5–32.0 μm wide, amphidial fovea with slightly asymmetrical lobes, stylet composed by an odontostyle moderately long (110.0–133.5 μm) and odontophore weakly developed, pharynx short ending in a terminal pharyngeal bulb with common arrangement of pharyngeal glands, tail short almost hemispherical shape. Longidorus oakgracilis n. sp. is characterized by having a moderately long and thin female body (5.4–7.9 mm in length), a bluntly-rounded lip region, set off from body contour by a slight depression, amphidial fovea funnel-shaped without lobe, odontostyle moderately long (94.0–106.0 μm), pharyngeal bulb with common arrangement of pharyngeal glands, short tail, bluntly hemispherical. The presence of males is common in both species. Integrative diagnosis was based on molecular data using D2-D3 expansion domains of the 28S rRNA, 18S rRNA, ITS1 rRNA and partial coxI gene sequences and morphology. Although different gene markers show variations in the phylogenetic relationships, phylogeny indicated that L. oakcrassus n. sp. is phylogenetically related with several species described from the Iberian Peninsula, including L. oakgracilis n. sp., which is clustered with L.cf. olegi, L. lusitanicus and L. silvestris. This research was financially supported by grant 201740E042, “Análisis de diversidad molecular, barcoding, y relaciones filogenéticas de nematodos fitoparásitos en cultivos mediterráneos” from Spanish National Research Council (CSIC). Authors thank G. León Ropero and J. Martín Barbarroja (IAS-CSIC) for the excellent technical assistance. The first author acknowledges the China Scholarship Council (CSC) for financial support. The second author is a recipient of Humboldt Research Fellowship for Postdoctoral Researchers at Helmholtz Centre for Environmental Research-UFZ, Leipzig, Germany. The fourth author acknowledges Spanish Ministry of Economy and Competitiveness for the “Ramon y Cajal” Fellowship RYC-2017-22228. 2021-01-18T10:40:23Z 2021-01-18T10:40:23Z 2020-01 2021-01-18T10:40:24Z artículo http://purl.org/coar/resource_type/c_6501 doi: 10.1007/s10658-019-01862-4 issn: 0929-1873 e-issn: 1573-8469 European Journal of Plant Pathology 156: 67-86 (2020) http://hdl.handle.net/10261/226932 10.1007/s10658-019-01862-4 http://dx.doi.org/10.13039/501100011033 http://dx.doi.org/10.13039/100005156 http://dx.doi.org/10.13039/501100004543 http://dx.doi.org/10.13039/501100003339 #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/RYC-2017-22228 Postprint http://doi.org/10.1007/s10658-019-01862-4 Sí open Springer Nature
institution IAS ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-ias-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del IAS España
topic 18S rDNA
28S rDNA D2-D3
Species description
CoxI
ITS1
Longidorids
Phylogeny
Taxonomy
18S rDNA
28S rDNA D2-D3
Species description
CoxI
ITS1
Longidorids
Phylogeny
Taxonomy
spellingShingle 18S rDNA
28S rDNA D2-D3
Species description
CoxI
ITS1
Longidorids
Phylogeny
Taxonomy
18S rDNA
28S rDNA D2-D3
Species description
CoxI
ITS1
Longidorids
Phylogeny
Taxonomy
Cai, Ruihang
Archidona-Yuste, Antonio
Cantalapiedra-Navarrete, C.
Palomares Rius, Juan E.
Castillo, Pablo
Integrative descriptions and molecular phylogeny of two new needle nematodes of the genus Longidorus (Nematoda: Longidoridae) from Spain
description Needle nematodes have an economic importance by causing damage to a wide range of natural and cultivated plants not only by directly feeding on root cells, but also by transmitting plant nepoviruses. Two new Longidorus nematodes, Longidorus oakcrassus n. sp. and Longidorus oakgracilis n. sp., are described and illustrated from populations associated with the rhizosphere of Pyrenean oak (Quercus pyrenaica Wild.) in southern Spain. The taxonomic position of both new species within the genus was assigned using an integrative approach. Morphologically, L. oakcrassus n. sp. is characterized by a female with a large and robust body size (9.2–12.2 mm), lip region anteriorly flattened to slightly rounded and almost continuous or slightly offset by a depression with body contour, ca 25.5–32.0 μm wide, amphidial fovea with slightly asymmetrical lobes, stylet composed by an odontostyle moderately long (110.0–133.5 μm) and odontophore weakly developed, pharynx short ending in a terminal pharyngeal bulb with common arrangement of pharyngeal glands, tail short almost hemispherical shape. Longidorus oakgracilis n. sp. is characterized by having a moderately long and thin female body (5.4–7.9 mm in length), a bluntly-rounded lip region, set off from body contour by a slight depression, amphidial fovea funnel-shaped without lobe, odontostyle moderately long (94.0–106.0 μm), pharyngeal bulb with common arrangement of pharyngeal glands, short tail, bluntly hemispherical. The presence of males is common in both species. Integrative diagnosis was based on molecular data using D2-D3 expansion domains of the 28S rRNA, 18S rRNA, ITS1 rRNA and partial coxI gene sequences and morphology. Although different gene markers show variations in the phylogenetic relationships, phylogeny indicated that L. oakcrassus n. sp. is phylogenetically related with several species described from the Iberian Peninsula, including L. oakgracilis n. sp., which is clustered with L.cf. olegi, L. lusitanicus and L. silvestris.
author2 Consejo Superior de Investigaciones Científicas (España)
author_facet Consejo Superior de Investigaciones Científicas (España)
Cai, Ruihang
Archidona-Yuste, Antonio
Cantalapiedra-Navarrete, C.
Palomares Rius, Juan E.
Castillo, Pablo
format artículo
topic_facet 18S rDNA
28S rDNA D2-D3
Species description
CoxI
ITS1
Longidorids
Phylogeny
Taxonomy
author Cai, Ruihang
Archidona-Yuste, Antonio
Cantalapiedra-Navarrete, C.
Palomares Rius, Juan E.
Castillo, Pablo
author_sort Cai, Ruihang
title Integrative descriptions and molecular phylogeny of two new needle nematodes of the genus Longidorus (Nematoda: Longidoridae) from Spain
title_short Integrative descriptions and molecular phylogeny of two new needle nematodes of the genus Longidorus (Nematoda: Longidoridae) from Spain
title_full Integrative descriptions and molecular phylogeny of two new needle nematodes of the genus Longidorus (Nematoda: Longidoridae) from Spain
title_fullStr Integrative descriptions and molecular phylogeny of two new needle nematodes of the genus Longidorus (Nematoda: Longidoridae) from Spain
title_full_unstemmed Integrative descriptions and molecular phylogeny of two new needle nematodes of the genus Longidorus (Nematoda: Longidoridae) from Spain
title_sort integrative descriptions and molecular phylogeny of two new needle nematodes of the genus longidorus (nematoda: longidoridae) from spain
publisher Springer Nature
publishDate 2020-01
url http://hdl.handle.net/10261/226932
http://dx.doi.org/10.13039/501100011033
http://dx.doi.org/10.13039/100005156
http://dx.doi.org/10.13039/501100004543
http://dx.doi.org/10.13039/501100003339
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