Pólya-splitting distributions as stationary solutions of multivariate birth-death processes under extended neutral theory

Multivariate count distributions are crucial for the inference of ecological processes underpinning biodiversity. In particular, neutral theory provides useful null distributions allowing the evaluation of adaptation or natural selection. In this paper, we build a broader family of multivariate distributions: the Polya-splitting distributions. We show that they emerge naturally as stationary distributions of a multivariate birth–death process. This family of distributions is a consistent extension of non-zero sum neutral models based on a master equation approach. It allows considering both total abundance of the community and relative abundances of species. We emphasize that this family is large enough to encompass various dependence structures among species. We also introduce the strong closure under addition property that can be useful to generate nested multi-level dependence structures. Although all Pólya splitting distributions do not share this property, we provide numerous example verifying it. They include the previously known example with independent species, and also new ones with alternative dependence structures. Overall, we advocate that Polya-splitting distribution should become a part of the classic toolbox for the analysis of multivariate count data in ecology, providing alternative approaches to joint species distribution framework. Comparatively, our approach allows to model dependencies between species at the observation level, while the classical JSDM's model dependencies at the latent process strata.

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Main Authors: Peyhardi, Jean, Laroche, Fabien, Mortier, Frédéric
Format: article biblioteca
Language:eng
Subjects:U10 - Informatique, mathématiques et statistiques, F40 - Écologie végétale, modèle mathématique, méthode statistique, modélisation environnementale, biodiversité, dynamique des populations, distribution géographique, http://aims.fao.org/aos/agrovoc/c_24199, http://aims.fao.org/aos/agrovoc/c_7377, http://aims.fao.org/aos/agrovoc/c_9000056, http://aims.fao.org/aos/agrovoc/c_33949, http://aims.fao.org/aos/agrovoc/c_6111, http://aims.fao.org/aos/agrovoc/c_5083,
Online Access:http://agritrop.cirad.fr/608419/
http://agritrop.cirad.fr/608419/1/peyhardi24.pdf
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spelling dig-cirad-fr-6084192024-04-11T08:09:41Z http://agritrop.cirad.fr/608419/ http://agritrop.cirad.fr/608419/ Pólya-splitting distributions as stationary solutions of multivariate birth-death processes under extended neutral theory. Peyhardi Jean, Laroche Fabien, Mortier Frédéric. 2024. Journal of Theoretical Biology, 582:111755, 12 p.https://doi.org/10.1016/j.jtbi.2024.111755 <https://doi.org/10.1016/j.jtbi.2024.111755> Pólya-splitting distributions as stationary solutions of multivariate birth-death processes under extended neutral theory Peyhardi, Jean Laroche, Fabien Mortier, Frédéric eng 2024 Journal of Theoretical Biology U10 - Informatique, mathématiques et statistiques F40 - Écologie végétale modèle mathématique méthode statistique modélisation environnementale biodiversité dynamique des populations distribution géographique http://aims.fao.org/aos/agrovoc/c_24199 http://aims.fao.org/aos/agrovoc/c_7377 http://aims.fao.org/aos/agrovoc/c_9000056 http://aims.fao.org/aos/agrovoc/c_33949 http://aims.fao.org/aos/agrovoc/c_6111 http://aims.fao.org/aos/agrovoc/c_5083 Multivariate count distributions are crucial for the inference of ecological processes underpinning biodiversity. In particular, neutral theory provides useful null distributions allowing the evaluation of adaptation or natural selection. In this paper, we build a broader family of multivariate distributions: the Polya-splitting distributions. We show that they emerge naturally as stationary distributions of a multivariate birth–death process. This family of distributions is a consistent extension of non-zero sum neutral models based on a master equation approach. It allows considering both total abundance of the community and relative abundances of species. We emphasize that this family is large enough to encompass various dependence structures among species. We also introduce the strong closure under addition property that can be useful to generate nested multi-level dependence structures. Although all Pólya splitting distributions do not share this property, we provide numerous example verifying it. They include the previously known example with independent species, and also new ones with alternative dependence structures. Overall, we advocate that Polya-splitting distribution should become a part of the classic toolbox for the analysis of multivariate count data in ecology, providing alternative approaches to joint species distribution framework. Comparatively, our approach allows to model dependencies between species at the observation level, while the classical JSDM's model dependencies at the latent process strata. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/608419/1/peyhardi24.pdf text cc_by info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/ https://doi.org/10.1016/j.jtbi.2024.111755 10.1016/j.jtbi.2024.111755 info:eu-repo/semantics/altIdentifier/doi/10.1016/j.jtbi.2024.111755 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1016/j.jtbi.2024.111755 info:eu-repo/grantAgreement///ANR-18-CE02-0025//(FRA) Nouvelles avancées dans la modélisation de la biodiversité et des services écosystémiques : améliorations statistiques et pertinences écologiques des modèles de distribution multi-espèces/GAMBAS info:eu-repo/grantAgreement///ANR-19-CE32-0002//(FRA) Approches neutres par blocs pour prédire l'effet de la gestion forestière sur la biodiversité au sein des dendromicrohabitats/BloBiForM
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic U10 - Informatique, mathématiques et statistiques
F40 - Écologie végétale
modèle mathématique
méthode statistique
modélisation environnementale
biodiversité
dynamique des populations
distribution géographique
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_9000056
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_6111
http://aims.fao.org/aos/agrovoc/c_5083
U10 - Informatique, mathématiques et statistiques
F40 - Écologie végétale
modèle mathématique
méthode statistique
modélisation environnementale
biodiversité
dynamique des populations
distribution géographique
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_9000056
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_6111
http://aims.fao.org/aos/agrovoc/c_5083
spellingShingle U10 - Informatique, mathématiques et statistiques
F40 - Écologie végétale
modèle mathématique
méthode statistique
modélisation environnementale
biodiversité
dynamique des populations
distribution géographique
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_9000056
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_6111
http://aims.fao.org/aos/agrovoc/c_5083
U10 - Informatique, mathématiques et statistiques
F40 - Écologie végétale
modèle mathématique
méthode statistique
modélisation environnementale
biodiversité
dynamique des populations
distribution géographique
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_9000056
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_6111
http://aims.fao.org/aos/agrovoc/c_5083
Peyhardi, Jean
Laroche, Fabien
Mortier, Frédéric
Pólya-splitting distributions as stationary solutions of multivariate birth-death processes under extended neutral theory
description Multivariate count distributions are crucial for the inference of ecological processes underpinning biodiversity. In particular, neutral theory provides useful null distributions allowing the evaluation of adaptation or natural selection. In this paper, we build a broader family of multivariate distributions: the Polya-splitting distributions. We show that they emerge naturally as stationary distributions of a multivariate birth–death process. This family of distributions is a consistent extension of non-zero sum neutral models based on a master equation approach. It allows considering both total abundance of the community and relative abundances of species. We emphasize that this family is large enough to encompass various dependence structures among species. We also introduce the strong closure under addition property that can be useful to generate nested multi-level dependence structures. Although all Pólya splitting distributions do not share this property, we provide numerous example verifying it. They include the previously known example with independent species, and also new ones with alternative dependence structures. Overall, we advocate that Polya-splitting distribution should become a part of the classic toolbox for the analysis of multivariate count data in ecology, providing alternative approaches to joint species distribution framework. Comparatively, our approach allows to model dependencies between species at the observation level, while the classical JSDM's model dependencies at the latent process strata.
format article
topic_facet U10 - Informatique, mathématiques et statistiques
F40 - Écologie végétale
modèle mathématique
méthode statistique
modélisation environnementale
biodiversité
dynamique des populations
distribution géographique
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_9000056
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_6111
http://aims.fao.org/aos/agrovoc/c_5083
author Peyhardi, Jean
Laroche, Fabien
Mortier, Frédéric
author_facet Peyhardi, Jean
Laroche, Fabien
Mortier, Frédéric
author_sort Peyhardi, Jean
title Pólya-splitting distributions as stationary solutions of multivariate birth-death processes under extended neutral theory
title_short Pólya-splitting distributions as stationary solutions of multivariate birth-death processes under extended neutral theory
title_full Pólya-splitting distributions as stationary solutions of multivariate birth-death processes under extended neutral theory
title_fullStr Pólya-splitting distributions as stationary solutions of multivariate birth-death processes under extended neutral theory
title_full_unstemmed Pólya-splitting distributions as stationary solutions of multivariate birth-death processes under extended neutral theory
title_sort pólya-splitting distributions as stationary solutions of multivariate birth-death processes under extended neutral theory
url http://agritrop.cirad.fr/608419/
http://agritrop.cirad.fr/608419/1/peyhardi24.pdf
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AT mortierfrederic polyasplittingdistributionsasstationarysolutionsofmultivariatebirthdeathprocessesunderextendedneutraltheory
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