Identification of a major QTL-Controlling resistance to the subtropical race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis

Vascular wilt caused by the ascomycete fungal pathogen Fusarium oxysporum f. sp. cubense (Foc) is a major constraint of banana production around the world. The virulent race, namely Tropical Race 4, can infect all Cavendish-type banana plants and is now widespread across the globe, causing devastating losses to global banana production. In this study, we characterized Foc Subtropical Race 4 (STR4) resistance in a wild banana relative which, through estimated genome size and ancestry analysis, was confirmed to be Musa acuminata ssp. malaccensis. Using a self-derived F2 population segregating for STR4 resistance, quantitative trait loci sequencing (QTL-seq) was performed on bulks consisting of resistant and susceptible individuals. Changes in SNP index between the bulks revealed a major QTL located on the distal end of the long arm of chromosome 3. Multiple resistance genes are present in this region. Identification of chromosome regions conferring resistance to Foc can facilitate marker assisted selection in breeding programs and paves the way towards identifying genes underpinning resistance.

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Bibliographic Details
Main Authors: Chen, Andrew, Sun, Jiaman, Martin, Guillaume, Gray, Lesley-Ann, Hribova, Eva, Christelová, Pavla, Yahiaoui, Nabila, Rounsley, Steve, Lyons, Rebecca, Batley, Jacqueline, Chen, Ning, Hamill, Sharon, Rai, Subash K., Coin, Lachlan, Uwimana, Brigitte, D'Hont, Angélique, Dolezel, Jaroslav, Edwards, David P., Swennen, Rony, Aitken, Elizabeth A. B.
Format: article biblioteca
Language:eng
Subjects:H20 - Maladies des plantes, H01 - Protection des végétaux - Considérations générales, Musa acuminata, Musa, génome, locus des caractères quantitatifs, Fusarium oxysporum, Musa (bananes), résistance génétique, collection de matériel génétique, http://aims.fao.org/aos/agrovoc/c_4994, http://aims.fao.org/aos/agrovoc/c_4993, http://aims.fao.org/aos/agrovoc/c_3224, http://aims.fao.org/aos/agrovoc/c_37974, http://aims.fao.org/aos/agrovoc/c_16244, http://aims.fao.org/aos/agrovoc/c_29128, http://aims.fao.org/aos/agrovoc/c_35130, http://aims.fao.org/aos/agrovoc/c_36739,
Online Access:http://agritrop.cirad.fr/603818/
http://agritrop.cirad.fr/603818/1/Chen%20et%20al%202023%20Identification%20of%20a%20major%20QTL-controlling%20resistance%20to%20teh%20subtropical%20Race%204%20of%20Fusarium%20oxysporum%20f.%20sp.%20cubense%20in%20Musa%20acuminata%20ssp%20malaccensis.pdf
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spelling dig-cirad-fr-6038182024-01-29T05:53:18Z http://agritrop.cirad.fr/603818/ http://agritrop.cirad.fr/603818/ Identification of a major QTL-Controlling resistance to the subtropical race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis. Chen Andrew, Sun Jiaman, Martin Guillaume, Gray Lesley-Ann, Hribova Eva, Christelová Pavla, Yahiaoui Nabila, Rounsley Steve, Lyons Rebecca, Batley Jacqueline, Chen Ning, Hamill Sharon, Rai Subash K., Coin Lachlan, Uwimana Brigitte, D'Hont Angélique, Dolezel Jaroslav, Edwards David P., Swennen Rony, Aitken Elizabeth A. B.. 2023. Pathogens, 12 (2), n.spéc. Current Research on Fusarium:289, 13 p.https://doi.org/10.3390/pathogens12020289 <https://doi.org/10.3390/pathogens12020289> Identification of a major QTL-Controlling resistance to the subtropical race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis Chen, Andrew Sun, Jiaman Martin, Guillaume Gray, Lesley-Ann Hribova, Eva Christelová, Pavla Yahiaoui, Nabila Rounsley, Steve Lyons, Rebecca Batley, Jacqueline Chen, Ning Hamill, Sharon Rai, Subash K. Coin, Lachlan Uwimana, Brigitte D'Hont, Angélique Dolezel, Jaroslav Edwards, David P. Swennen, Rony Aitken, Elizabeth A. B. eng 2023 Pathogens H20 - Maladies des plantes H01 - Protection des végétaux - Considérations générales Musa acuminata Musa génome locus des caractères quantitatifs Fusarium oxysporum Musa (bananes) résistance génétique collection de matériel génétique http://aims.fao.org/aos/agrovoc/c_4994 http://aims.fao.org/aos/agrovoc/c_4993 http://aims.fao.org/aos/agrovoc/c_3224 http://aims.fao.org/aos/agrovoc/c_37974 http://aims.fao.org/aos/agrovoc/c_16244 http://aims.fao.org/aos/agrovoc/c_29128 http://aims.fao.org/aos/agrovoc/c_35130 http://aims.fao.org/aos/agrovoc/c_36739 Vascular wilt caused by the ascomycete fungal pathogen Fusarium oxysporum f. sp. cubense (Foc) is a major constraint of banana production around the world. The virulent race, namely Tropical Race 4, can infect all Cavendish-type banana plants and is now widespread across the globe, causing devastating losses to global banana production. In this study, we characterized Foc Subtropical Race 4 (STR4) resistance in a wild banana relative which, through estimated genome size and ancestry analysis, was confirmed to be Musa acuminata ssp. malaccensis. Using a self-derived F2 population segregating for STR4 resistance, quantitative trait loci sequencing (QTL-seq) was performed on bulks consisting of resistant and susceptible individuals. Changes in SNP index between the bulks revealed a major QTL located on the distal end of the long arm of chromosome 3. Multiple resistance genes are present in this region. Identification of chromosome regions conferring resistance to Foc can facilitate marker assisted selection in breeding programs and paves the way towards identifying genes underpinning resistance. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/603818/1/Chen%20et%20al%202023%20Identification%20of%20a%20major%20QTL-controlling%20resistance%20to%20teh%20subtropical%20Race%204%20of%20Fusarium%20oxysporum%20f.%20sp.%20cubense%20in%20Musa%20acuminata%20ssp%20malaccensis.pdf text cc_by info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/ https://doi.org/10.3390/pathogens12020289 10.3390/pathogens12020289 info:eu-repo/semantics/altIdentifier/doi/10.3390/pathogens12020289 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.3390/pathogens12020289
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic H20 - Maladies des plantes
H01 - Protection des végétaux - Considérations générales
Musa acuminata
Musa
génome
locus des caractères quantitatifs
Fusarium oxysporum
Musa (bananes)
résistance génétique
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_3224
http://aims.fao.org/aos/agrovoc/c_37974
http://aims.fao.org/aos/agrovoc/c_16244
http://aims.fao.org/aos/agrovoc/c_29128
http://aims.fao.org/aos/agrovoc/c_35130
http://aims.fao.org/aos/agrovoc/c_36739
H20 - Maladies des plantes
H01 - Protection des végétaux - Considérations générales
Musa acuminata
Musa
génome
locus des caractères quantitatifs
Fusarium oxysporum
Musa (bananes)
résistance génétique
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_3224
http://aims.fao.org/aos/agrovoc/c_37974
http://aims.fao.org/aos/agrovoc/c_16244
http://aims.fao.org/aos/agrovoc/c_29128
http://aims.fao.org/aos/agrovoc/c_35130
http://aims.fao.org/aos/agrovoc/c_36739
spellingShingle H20 - Maladies des plantes
H01 - Protection des végétaux - Considérations générales
Musa acuminata
Musa
génome
locus des caractères quantitatifs
Fusarium oxysporum
Musa (bananes)
résistance génétique
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_3224
http://aims.fao.org/aos/agrovoc/c_37974
http://aims.fao.org/aos/agrovoc/c_16244
http://aims.fao.org/aos/agrovoc/c_29128
http://aims.fao.org/aos/agrovoc/c_35130
http://aims.fao.org/aos/agrovoc/c_36739
H20 - Maladies des plantes
H01 - Protection des végétaux - Considérations générales
Musa acuminata
Musa
génome
locus des caractères quantitatifs
Fusarium oxysporum
Musa (bananes)
résistance génétique
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_3224
http://aims.fao.org/aos/agrovoc/c_37974
http://aims.fao.org/aos/agrovoc/c_16244
http://aims.fao.org/aos/agrovoc/c_29128
http://aims.fao.org/aos/agrovoc/c_35130
http://aims.fao.org/aos/agrovoc/c_36739
Chen, Andrew
Sun, Jiaman
Martin, Guillaume
Gray, Lesley-Ann
Hribova, Eva
Christelová, Pavla
Yahiaoui, Nabila
Rounsley, Steve
Lyons, Rebecca
Batley, Jacqueline
Chen, Ning
Hamill, Sharon
Rai, Subash K.
Coin, Lachlan
Uwimana, Brigitte
D'Hont, Angélique
Dolezel, Jaroslav
Edwards, David P.
Swennen, Rony
Aitken, Elizabeth A. B.
Identification of a major QTL-Controlling resistance to the subtropical race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis
description Vascular wilt caused by the ascomycete fungal pathogen Fusarium oxysporum f. sp. cubense (Foc) is a major constraint of banana production around the world. The virulent race, namely Tropical Race 4, can infect all Cavendish-type banana plants and is now widespread across the globe, causing devastating losses to global banana production. In this study, we characterized Foc Subtropical Race 4 (STR4) resistance in a wild banana relative which, through estimated genome size and ancestry analysis, was confirmed to be Musa acuminata ssp. malaccensis. Using a self-derived F2 population segregating for STR4 resistance, quantitative trait loci sequencing (QTL-seq) was performed on bulks consisting of resistant and susceptible individuals. Changes in SNP index between the bulks revealed a major QTL located on the distal end of the long arm of chromosome 3. Multiple resistance genes are present in this region. Identification of chromosome regions conferring resistance to Foc can facilitate marker assisted selection in breeding programs and paves the way towards identifying genes underpinning resistance.
format article
topic_facet H20 - Maladies des plantes
H01 - Protection des végétaux - Considérations générales
Musa acuminata
Musa
génome
locus des caractères quantitatifs
Fusarium oxysporum
Musa (bananes)
résistance génétique
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_3224
http://aims.fao.org/aos/agrovoc/c_37974
http://aims.fao.org/aos/agrovoc/c_16244
http://aims.fao.org/aos/agrovoc/c_29128
http://aims.fao.org/aos/agrovoc/c_35130
http://aims.fao.org/aos/agrovoc/c_36739
author Chen, Andrew
Sun, Jiaman
Martin, Guillaume
Gray, Lesley-Ann
Hribova, Eva
Christelová, Pavla
Yahiaoui, Nabila
Rounsley, Steve
Lyons, Rebecca
Batley, Jacqueline
Chen, Ning
Hamill, Sharon
Rai, Subash K.
Coin, Lachlan
Uwimana, Brigitte
D'Hont, Angélique
Dolezel, Jaroslav
Edwards, David P.
Swennen, Rony
Aitken, Elizabeth A. B.
author_facet Chen, Andrew
Sun, Jiaman
Martin, Guillaume
Gray, Lesley-Ann
Hribova, Eva
Christelová, Pavla
Yahiaoui, Nabila
Rounsley, Steve
Lyons, Rebecca
Batley, Jacqueline
Chen, Ning
Hamill, Sharon
Rai, Subash K.
Coin, Lachlan
Uwimana, Brigitte
D'Hont, Angélique
Dolezel, Jaroslav
Edwards, David P.
Swennen, Rony
Aitken, Elizabeth A. B.
author_sort Chen, Andrew
title Identification of a major QTL-Controlling resistance to the subtropical race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis
title_short Identification of a major QTL-Controlling resistance to the subtropical race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis
title_full Identification of a major QTL-Controlling resistance to the subtropical race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis
title_fullStr Identification of a major QTL-Controlling resistance to the subtropical race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis
title_full_unstemmed Identification of a major QTL-Controlling resistance to the subtropical race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis
title_sort identification of a major qtl-controlling resistance to the subtropical race 4 of fusarium oxysporum f. sp. cubense in musa acuminata ssp. malaccensis
url http://agritrop.cirad.fr/603818/
http://agritrop.cirad.fr/603818/1/Chen%20et%20al%202023%20Identification%20of%20a%20major%20QTL-controlling%20resistance%20to%20teh%20subtropical%20Race%204%20of%20Fusarium%20oxysporum%20f.%20sp.%20cubense%20in%20Musa%20acuminata%20ssp%20malaccensis.pdf
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