A non-shedding fruit Elaeis oleifera palm reveals perturbations to hormone signaling, ROS homeostasis, and hemicellulose metabolism

The developmentally programmed loss of a plant organ is called abscission. This process is characterized by the ultimate separation of adjacent cells in the abscission zone (AZ). The discovery of an American oil palm (Elaeis oleifera) variant that does not shed its has allowed for the study of the mechanisms of ripe fruit abscission in this species. A comparative transcriptome analysis was performed to compare the fruit AZs of the non-shedding E. oleifera variant to an individual of the same progeny that sheds its ripe fruit normally. The study provides evidence for widespread perturbation to gene expression in the AZ of the non-shedding variant, compared to the normal fruit-shedding control, and offers insight into abscission-related functions. Beyond the genes with known or suspected roles during organ abscission or indehiscence that were identified, a list of genes with hormone-related functions, including ethylene, jasmonic acid, abscisic acid, cytokinin and salicylic acid, in addition to reactive oxygen species (ROS) metabolism, transcriptional responses and signaling pathways, was compiled. The results also allowed a comparison between the ripe fruit abscission processes of the African and American oil palm species at the molecular level and revealed commonalities with environmental stress pathways.

Saved in:
Bibliographic Details
Main Authors: Morcillo, Fabienne, Serret, Julien, Beckers, Antoine, Collin, Myriam, Tisne, Sébastien, George, Simon, Poveda, Roberto, Louise, Claude, Tranbarger, Timothy John
Format: article biblioteca
Language:eng
Subjects:F60 - Physiologie et biochimie végétale, F30 - Génétique et amélioration des plantes, abscission, hémicellulose, Elaeis oleifera, dérivé réactif de l'oxygène, homéostasie, transcriptome, http://aims.fao.org/aos/agrovoc/c_25, http://aims.fao.org/aos/agrovoc/c_3554, http://aims.fao.org/aos/agrovoc/c_1904, http://aims.fao.org/aos/agrovoc/c_92379, http://aims.fao.org/aos/agrovoc/c_33930, http://aims.fao.org/aos/agrovoc/c_620c5378,
Online Access:http://agritrop.cirad.fr/599532/
http://agritrop.cirad.fr/599532/1/genes-12-01724-1.pdf
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-cirad-fr-599532
record_format koha
spelling dig-cirad-fr-5995322024-01-29T03:50:56Z http://agritrop.cirad.fr/599532/ http://agritrop.cirad.fr/599532/ A non-shedding fruit Elaeis oleifera palm reveals perturbations to hormone signaling, ROS homeostasis, and hemicellulose metabolism. Morcillo Fabienne, Serret Julien, Beckers Antoine, Collin Myriam, Tisne Sébastien, George Simon, Poveda Roberto, Louise Claude, Tranbarger Timothy John. 2021. Genes, 12 (11), n.spéc. Genetic Basis and Physiology of Fruit Ripening and Abscission:1724, 18 p.https://doi.org/10.3390/genes12111724 <https://doi.org/10.3390/genes12111724> A non-shedding fruit Elaeis oleifera palm reveals perturbations to hormone signaling, ROS homeostasis, and hemicellulose metabolism Morcillo, Fabienne Serret, Julien Beckers, Antoine Collin, Myriam Tisne, Sébastien George, Simon Poveda, Roberto Louise, Claude Tranbarger, Timothy John eng 2021 Genes F60 - Physiologie et biochimie végétale F30 - Génétique et amélioration des plantes abscission hémicellulose Elaeis oleifera dérivé réactif de l'oxygène homéostasie transcriptome http://aims.fao.org/aos/agrovoc/c_25 http://aims.fao.org/aos/agrovoc/c_3554 http://aims.fao.org/aos/agrovoc/c_1904 http://aims.fao.org/aos/agrovoc/c_92379 http://aims.fao.org/aos/agrovoc/c_33930 http://aims.fao.org/aos/agrovoc/c_620c5378 The developmentally programmed loss of a plant organ is called abscission. This process is characterized by the ultimate separation of adjacent cells in the abscission zone (AZ). The discovery of an American oil palm (Elaeis oleifera) variant that does not shed its has allowed for the study of the mechanisms of ripe fruit abscission in this species. A comparative transcriptome analysis was performed to compare the fruit AZs of the non-shedding E. oleifera variant to an individual of the same progeny that sheds its ripe fruit normally. The study provides evidence for widespread perturbation to gene expression in the AZ of the non-shedding variant, compared to the normal fruit-shedding control, and offers insight into abscission-related functions. Beyond the genes with known or suspected roles during organ abscission or indehiscence that were identified, a list of genes with hormone-related functions, including ethylene, jasmonic acid, abscisic acid, cytokinin and salicylic acid, in addition to reactive oxygen species (ROS) metabolism, transcriptional responses and signaling pathways, was compiled. The results also allowed a comparison between the ripe fruit abscission processes of the African and American oil palm species at the molecular level and revealed commonalities with environmental stress pathways. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/599532/1/genes-12-01724-1.pdf text cc_by info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/ https://doi.org/10.3390/genes12111724 10.3390/genes12111724 info:eu-repo/semantics/altIdentifier/doi/10.3390/genes12111724 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.3390/genes12111724 info:eu-repo/semantics/dataset/purl/https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE186050
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F60 - Physiologie et biochimie végétale
F30 - Génétique et amélioration des plantes
abscission
hémicellulose
Elaeis oleifera
dérivé réactif de l'oxygène
homéostasie
transcriptome
http://aims.fao.org/aos/agrovoc/c_25
http://aims.fao.org/aos/agrovoc/c_3554
http://aims.fao.org/aos/agrovoc/c_1904
http://aims.fao.org/aos/agrovoc/c_92379
http://aims.fao.org/aos/agrovoc/c_33930
http://aims.fao.org/aos/agrovoc/c_620c5378
F60 - Physiologie et biochimie végétale
F30 - Génétique et amélioration des plantes
abscission
hémicellulose
Elaeis oleifera
dérivé réactif de l'oxygène
homéostasie
transcriptome
http://aims.fao.org/aos/agrovoc/c_25
http://aims.fao.org/aos/agrovoc/c_3554
http://aims.fao.org/aos/agrovoc/c_1904
http://aims.fao.org/aos/agrovoc/c_92379
http://aims.fao.org/aos/agrovoc/c_33930
http://aims.fao.org/aos/agrovoc/c_620c5378
spellingShingle F60 - Physiologie et biochimie végétale
F30 - Génétique et amélioration des plantes
abscission
hémicellulose
Elaeis oleifera
dérivé réactif de l'oxygène
homéostasie
transcriptome
http://aims.fao.org/aos/agrovoc/c_25
http://aims.fao.org/aos/agrovoc/c_3554
http://aims.fao.org/aos/agrovoc/c_1904
http://aims.fao.org/aos/agrovoc/c_92379
http://aims.fao.org/aos/agrovoc/c_33930
http://aims.fao.org/aos/agrovoc/c_620c5378
F60 - Physiologie et biochimie végétale
F30 - Génétique et amélioration des plantes
abscission
hémicellulose
Elaeis oleifera
dérivé réactif de l'oxygène
homéostasie
transcriptome
http://aims.fao.org/aos/agrovoc/c_25
http://aims.fao.org/aos/agrovoc/c_3554
http://aims.fao.org/aos/agrovoc/c_1904
http://aims.fao.org/aos/agrovoc/c_92379
http://aims.fao.org/aos/agrovoc/c_33930
http://aims.fao.org/aos/agrovoc/c_620c5378
Morcillo, Fabienne
Serret, Julien
Beckers, Antoine
Collin, Myriam
Tisne, Sébastien
George, Simon
Poveda, Roberto
Louise, Claude
Tranbarger, Timothy John
A non-shedding fruit Elaeis oleifera palm reveals perturbations to hormone signaling, ROS homeostasis, and hemicellulose metabolism
description The developmentally programmed loss of a plant organ is called abscission. This process is characterized by the ultimate separation of adjacent cells in the abscission zone (AZ). The discovery of an American oil palm (Elaeis oleifera) variant that does not shed its has allowed for the study of the mechanisms of ripe fruit abscission in this species. A comparative transcriptome analysis was performed to compare the fruit AZs of the non-shedding E. oleifera variant to an individual of the same progeny that sheds its ripe fruit normally. The study provides evidence for widespread perturbation to gene expression in the AZ of the non-shedding variant, compared to the normal fruit-shedding control, and offers insight into abscission-related functions. Beyond the genes with known or suspected roles during organ abscission or indehiscence that were identified, a list of genes with hormone-related functions, including ethylene, jasmonic acid, abscisic acid, cytokinin and salicylic acid, in addition to reactive oxygen species (ROS) metabolism, transcriptional responses and signaling pathways, was compiled. The results also allowed a comparison between the ripe fruit abscission processes of the African and American oil palm species at the molecular level and revealed commonalities with environmental stress pathways.
format article
topic_facet F60 - Physiologie et biochimie végétale
F30 - Génétique et amélioration des plantes
abscission
hémicellulose
Elaeis oleifera
dérivé réactif de l'oxygène
homéostasie
transcriptome
http://aims.fao.org/aos/agrovoc/c_25
http://aims.fao.org/aos/agrovoc/c_3554
http://aims.fao.org/aos/agrovoc/c_1904
http://aims.fao.org/aos/agrovoc/c_92379
http://aims.fao.org/aos/agrovoc/c_33930
http://aims.fao.org/aos/agrovoc/c_620c5378
author Morcillo, Fabienne
Serret, Julien
Beckers, Antoine
Collin, Myriam
Tisne, Sébastien
George, Simon
Poveda, Roberto
Louise, Claude
Tranbarger, Timothy John
author_facet Morcillo, Fabienne
Serret, Julien
Beckers, Antoine
Collin, Myriam
Tisne, Sébastien
George, Simon
Poveda, Roberto
Louise, Claude
Tranbarger, Timothy John
author_sort Morcillo, Fabienne
title A non-shedding fruit Elaeis oleifera palm reveals perturbations to hormone signaling, ROS homeostasis, and hemicellulose metabolism
title_short A non-shedding fruit Elaeis oleifera palm reveals perturbations to hormone signaling, ROS homeostasis, and hemicellulose metabolism
title_full A non-shedding fruit Elaeis oleifera palm reveals perturbations to hormone signaling, ROS homeostasis, and hemicellulose metabolism
title_fullStr A non-shedding fruit Elaeis oleifera palm reveals perturbations to hormone signaling, ROS homeostasis, and hemicellulose metabolism
title_full_unstemmed A non-shedding fruit Elaeis oleifera palm reveals perturbations to hormone signaling, ROS homeostasis, and hemicellulose metabolism
title_sort non-shedding fruit elaeis oleifera palm reveals perturbations to hormone signaling, ros homeostasis, and hemicellulose metabolism
url http://agritrop.cirad.fr/599532/
http://agritrop.cirad.fr/599532/1/genes-12-01724-1.pdf
work_keys_str_mv AT morcillofabienne anonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT serretjulien anonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT beckersantoine anonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT collinmyriam anonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT tisnesebastien anonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT georgesimon anonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT povedaroberto anonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT louiseclaude anonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT tranbargertimothyjohn anonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT morcillofabienne nonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT serretjulien nonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT beckersantoine nonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT collinmyriam nonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT tisnesebastien nonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT georgesimon nonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT povedaroberto nonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT louiseclaude nonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
AT tranbargertimothyjohn nonsheddingfruitelaeisoleiferapalmrevealsperturbationstohormonesignalingroshomeostasisandhemicellulosemetabolism
_version_ 1792500249847136256