Antimicrobial resistance trends in Escherichia coli in South African Poultry: 2009–2015

Prolonged and widespread in-feed use of antimicrobials as either growth promoters or to treat bacterial infections in commercial poultry production contributed to the emergence of resistant bacterial strains globally. A total of 3544 avian pathogenic Escherichia coli strains isolated from commercial broilers in South Africa between 2009 and 2015 were tested for susceptibility against eight classes of antimicrobials. Time series analyses were conducted to assess seasonal and general trends in antibiotic resistance. Seasonal trends were seen in the tetracyclines, with peaks of resistance in the winter months when respiratory diseases are at their worst. Resistance to quinolones peaked in 2012 after which there was an overall decreasing trend in resistance. Colistin resistance increased gradually from 2009 with a drastic rise to 12.08% in 2015, but its use in feed was stopped in 2016. Florfenicol also showed a sharp increase in resistance from 2.36% in 2009 to 6.63% in 2015. Resistance to trimethoprim-sulphadiazine decreased sharply by the end of 2015, as did spectinomycin and fosfomycin and amoxicillin. The overall prevalence of multidrug resistance (MDR) was 80.6 (95% confidence interval, 0.743–0.819), but the years 2013, 2014, and 2015 showed a significantly lower level of MDR compared with 2009. This study is the first detailed analysis of antimicrobial resistance in poultry production in the country, and constant monitoring of resistance data should be continued to aid in the judicious use of antimicrobial compounds.

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Main Authors: Theobald, Shannon, Etter, Eric, Gerber, David, Abolnik, Célia
Format: article biblioteca
Language:eng
Subjects:L73 - Maladies des animaux, L50 - Physiologie et biochimie animales, Résistance aux antibiotiques, volaille, http://aims.fao.org/aos/agrovoc/c_8848, http://aims.fao.org/aos/agrovoc/c_6145, http://aims.fao.org/aos/agrovoc/c_7252,
Online Access:http://agritrop.cirad.fr/592554/
http://agritrop.cirad.fr/592554/1/Theobald%20%2019%20AMREcoliPoultry%20SA2009-15.pdf
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spelling dig-cirad-fr-5925542024-01-29T01:59:40Z http://agritrop.cirad.fr/592554/ http://agritrop.cirad.fr/592554/ Antimicrobial resistance trends in Escherichia coli in South African Poultry: 2009–2015. Theobald Shannon, Etter Eric, Gerber David, Abolnik Célia. 2019. Foodborne Pathogens and Disease, 16 (9), 9 p.https://doi.org/10.1089/fpd.2018.2612 <https://doi.org/10.1089/fpd.2018.2612> Antimicrobial resistance trends in Escherichia coli in South African Poultry: 2009–2015 Theobald, Shannon Etter, Eric Gerber, David Abolnik, Célia eng 2019 Foodborne Pathogens and Disease L73 - Maladies des animaux L50 - Physiologie et biochimie animales Résistance aux antibiotiques volaille http://aims.fao.org/aos/agrovoc/c_8848 http://aims.fao.org/aos/agrovoc/c_6145 Afrique du Sud http://aims.fao.org/aos/agrovoc/c_7252 Prolonged and widespread in-feed use of antimicrobials as either growth promoters or to treat bacterial infections in commercial poultry production contributed to the emergence of resistant bacterial strains globally. A total of 3544 avian pathogenic Escherichia coli strains isolated from commercial broilers in South Africa between 2009 and 2015 were tested for susceptibility against eight classes of antimicrobials. Time series analyses were conducted to assess seasonal and general trends in antibiotic resistance. Seasonal trends were seen in the tetracyclines, with peaks of resistance in the winter months when respiratory diseases are at their worst. Resistance to quinolones peaked in 2012 after which there was an overall decreasing trend in resistance. Colistin resistance increased gradually from 2009 with a drastic rise to 12.08% in 2015, but its use in feed was stopped in 2016. Florfenicol also showed a sharp increase in resistance from 2.36% in 2009 to 6.63% in 2015. Resistance to trimethoprim-sulphadiazine decreased sharply by the end of 2015, as did spectinomycin and fosfomycin and amoxicillin. The overall prevalence of multidrug resistance (MDR) was 80.6 (95% confidence interval, 0.743–0.819), but the years 2013, 2014, and 2015 showed a significantly lower level of MDR compared with 2009. This study is the first detailed analysis of antimicrobial resistance in poultry production in the country, and constant monitoring of resistance data should be continued to aid in the judicious use of antimicrobial compounds. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/592554/1/Theobald%20%2019%20AMREcoliPoultry%20SA2009-15.pdf text Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1089/fpd.2018.2612 10.1089/fpd.2018.2612 info:eu-repo/semantics/altIdentifier/doi/10.1089/fpd.2018.2612 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1089/fpd.2018.2612
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic L73 - Maladies des animaux
L50 - Physiologie et biochimie animales
Résistance aux antibiotiques
volaille
http://aims.fao.org/aos/agrovoc/c_8848
http://aims.fao.org/aos/agrovoc/c_6145
http://aims.fao.org/aos/agrovoc/c_7252
L73 - Maladies des animaux
L50 - Physiologie et biochimie animales
Résistance aux antibiotiques
volaille
http://aims.fao.org/aos/agrovoc/c_8848
http://aims.fao.org/aos/agrovoc/c_6145
http://aims.fao.org/aos/agrovoc/c_7252
spellingShingle L73 - Maladies des animaux
L50 - Physiologie et biochimie animales
Résistance aux antibiotiques
volaille
http://aims.fao.org/aos/agrovoc/c_8848
http://aims.fao.org/aos/agrovoc/c_6145
http://aims.fao.org/aos/agrovoc/c_7252
L73 - Maladies des animaux
L50 - Physiologie et biochimie animales
Résistance aux antibiotiques
volaille
http://aims.fao.org/aos/agrovoc/c_8848
http://aims.fao.org/aos/agrovoc/c_6145
http://aims.fao.org/aos/agrovoc/c_7252
Theobald, Shannon
Etter, Eric
Gerber, David
Abolnik, Célia
Antimicrobial resistance trends in Escherichia coli in South African Poultry: 2009–2015
description Prolonged and widespread in-feed use of antimicrobials as either growth promoters or to treat bacterial infections in commercial poultry production contributed to the emergence of resistant bacterial strains globally. A total of 3544 avian pathogenic Escherichia coli strains isolated from commercial broilers in South Africa between 2009 and 2015 were tested for susceptibility against eight classes of antimicrobials. Time series analyses were conducted to assess seasonal and general trends in antibiotic resistance. Seasonal trends were seen in the tetracyclines, with peaks of resistance in the winter months when respiratory diseases are at their worst. Resistance to quinolones peaked in 2012 after which there was an overall decreasing trend in resistance. Colistin resistance increased gradually from 2009 with a drastic rise to 12.08% in 2015, but its use in feed was stopped in 2016. Florfenicol also showed a sharp increase in resistance from 2.36% in 2009 to 6.63% in 2015. Resistance to trimethoprim-sulphadiazine decreased sharply by the end of 2015, as did spectinomycin and fosfomycin and amoxicillin. The overall prevalence of multidrug resistance (MDR) was 80.6 (95% confidence interval, 0.743–0.819), but the years 2013, 2014, and 2015 showed a significantly lower level of MDR compared with 2009. This study is the first detailed analysis of antimicrobial resistance in poultry production in the country, and constant monitoring of resistance data should be continued to aid in the judicious use of antimicrobial compounds.
format article
topic_facet L73 - Maladies des animaux
L50 - Physiologie et biochimie animales
Résistance aux antibiotiques
volaille
http://aims.fao.org/aos/agrovoc/c_8848
http://aims.fao.org/aos/agrovoc/c_6145
http://aims.fao.org/aos/agrovoc/c_7252
author Theobald, Shannon
Etter, Eric
Gerber, David
Abolnik, Célia
author_facet Theobald, Shannon
Etter, Eric
Gerber, David
Abolnik, Célia
author_sort Theobald, Shannon
title Antimicrobial resistance trends in Escherichia coli in South African Poultry: 2009–2015
title_short Antimicrobial resistance trends in Escherichia coli in South African Poultry: 2009–2015
title_full Antimicrobial resistance trends in Escherichia coli in South African Poultry: 2009–2015
title_fullStr Antimicrobial resistance trends in Escherichia coli in South African Poultry: 2009–2015
title_full_unstemmed Antimicrobial resistance trends in Escherichia coli in South African Poultry: 2009–2015
title_sort antimicrobial resistance trends in escherichia coli in south african poultry: 2009–2015
url http://agritrop.cirad.fr/592554/
http://agritrop.cirad.fr/592554/1/Theobald%20%2019%20AMREcoliPoultry%20SA2009-15.pdf
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AT ettereric antimicrobialresistancetrendsinescherichiacoliinsouthafricanpoultry20092015
AT gerberdavid antimicrobialresistancetrendsinescherichiacoliinsouthafricanpoultry20092015
AT abolnikcelia antimicrobialresistancetrendsinescherichiacoliinsouthafricanpoultry20092015
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