Detection of NAM-A1 natural variants in bread wheat reveals differences in haplotype distribution between a worldwide core collection and european elite germplasm

In wheat, remobilization of nitrogen absorbed before anthesis and regulation of monocarpic senescence is a major issue in breeding for nutrient use efficiency. We identified natural variants of NAM-A1, a gene having the same role as its well-characterized homoeolog NAM-B1, a NAC transcription factor associated with senescence kinetics and nutrient remobilization to the grain. Differences in haplotype frequencies between a worldwide core collection and a panel of European elite varieties were assessed and discussed. Moreover, hypotheses for the loss of function of the most common haplotype in elite European germplasm are discussed.

Saved in:
Bibliographic Details
Main Authors: Cormier, Fabien, Throude, Mickaël, Ravel, Catherine, Le Gouis, Jacques, Leveugle, Magalie, Lafarge, Stéphane, Exbrayat, Florence, Duranton, Nadine, Praud, Sébastien
Format: article biblioteca
Language:eng
Subjects:F30 - Génétique et amélioration des plantes, Triticum turgidum, Triticum aestivum, Triticum, Transcription génique, germoplasme, http://aims.fao.org/aos/agrovoc/c_7958, http://aims.fao.org/aos/agrovoc/c_7951, http://aims.fao.org/aos/agrovoc/c_7950, http://aims.fao.org/aos/agrovoc/c_35128, http://aims.fao.org/aos/agrovoc/c_3249,
Online Access:http://agritrop.cirad.fr/587090/
http://agritrop.cirad.fr/587090/1/NAM-A1.pdf
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-cirad-fr-587090
record_format koha
spelling dig-cirad-fr-5870902024-01-29T05:42:41Z http://agritrop.cirad.fr/587090/ http://agritrop.cirad.fr/587090/ Detection of NAM-A1 natural variants in bread wheat reveals differences in haplotype distribution between a worldwide core collection and european elite germplasm. Cormier Fabien, Throude Mickaël, Ravel Catherine, Le Gouis Jacques, Leveugle Magalie, Lafarge Stéphane, Exbrayat Florence, Duranton Nadine, Praud Sébastien. 2015. Agronomy (Basel), 5 (4) : 143-151.https://doi.org/10.3390/agronomy5020143 <https://doi.org/10.3390/agronomy5020143> Detection of NAM-A1 natural variants in bread wheat reveals differences in haplotype distribution between a worldwide core collection and european elite germplasm Cormier, Fabien Throude, Mickaël Ravel, Catherine Le Gouis, Jacques Leveugle, Magalie Lafarge, Stéphane Exbrayat, Florence Duranton, Nadine Praud, Sébastien eng 2015 Agronomy (Basel) F30 - Génétique et amélioration des plantes Triticum turgidum Triticum aestivum Triticum Transcription génique germoplasme http://aims.fao.org/aos/agrovoc/c_7958 http://aims.fao.org/aos/agrovoc/c_7951 http://aims.fao.org/aos/agrovoc/c_7950 http://aims.fao.org/aos/agrovoc/c_35128 http://aims.fao.org/aos/agrovoc/c_3249 In wheat, remobilization of nitrogen absorbed before anthesis and regulation of monocarpic senescence is a major issue in breeding for nutrient use efficiency. We identified natural variants of NAM-A1, a gene having the same role as its well-characterized homoeolog NAM-B1, a NAC transcription factor associated with senescence kinetics and nutrient remobilization to the grain. Differences in haplotype frequencies between a worldwide core collection and a panel of European elite varieties were assessed and discussed. Moreover, hypotheses for the loss of function of the most common haplotype in elite European germplasm are discussed. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/587090/1/NAM-A1.pdf text Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.3390/agronomy5020143 10.3390/agronomy5020143 info:eu-repo/semantics/altIdentifier/doi/10.3390/agronomy5020143 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.3390/agronomy5020143
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
Triticum turgidum
Triticum aestivum
Triticum
Transcription génique
germoplasme
http://aims.fao.org/aos/agrovoc/c_7958
http://aims.fao.org/aos/agrovoc/c_7951
http://aims.fao.org/aos/agrovoc/c_7950
http://aims.fao.org/aos/agrovoc/c_35128
http://aims.fao.org/aos/agrovoc/c_3249
F30 - Génétique et amélioration des plantes
Triticum turgidum
Triticum aestivum
Triticum
Transcription génique
germoplasme
http://aims.fao.org/aos/agrovoc/c_7958
http://aims.fao.org/aos/agrovoc/c_7951
http://aims.fao.org/aos/agrovoc/c_7950
http://aims.fao.org/aos/agrovoc/c_35128
http://aims.fao.org/aos/agrovoc/c_3249
spellingShingle F30 - Génétique et amélioration des plantes
Triticum turgidum
Triticum aestivum
Triticum
Transcription génique
germoplasme
http://aims.fao.org/aos/agrovoc/c_7958
http://aims.fao.org/aos/agrovoc/c_7951
http://aims.fao.org/aos/agrovoc/c_7950
http://aims.fao.org/aos/agrovoc/c_35128
http://aims.fao.org/aos/agrovoc/c_3249
F30 - Génétique et amélioration des plantes
Triticum turgidum
Triticum aestivum
Triticum
Transcription génique
germoplasme
http://aims.fao.org/aos/agrovoc/c_7958
http://aims.fao.org/aos/agrovoc/c_7951
http://aims.fao.org/aos/agrovoc/c_7950
http://aims.fao.org/aos/agrovoc/c_35128
http://aims.fao.org/aos/agrovoc/c_3249
Cormier, Fabien
Throude, Mickaël
Ravel, Catherine
Le Gouis, Jacques
Leveugle, Magalie
Lafarge, Stéphane
Exbrayat, Florence
Duranton, Nadine
Praud, Sébastien
Detection of NAM-A1 natural variants in bread wheat reveals differences in haplotype distribution between a worldwide core collection and european elite germplasm
description In wheat, remobilization of nitrogen absorbed before anthesis and regulation of monocarpic senescence is a major issue in breeding for nutrient use efficiency. We identified natural variants of NAM-A1, a gene having the same role as its well-characterized homoeolog NAM-B1, a NAC transcription factor associated with senescence kinetics and nutrient remobilization to the grain. Differences in haplotype frequencies between a worldwide core collection and a panel of European elite varieties were assessed and discussed. Moreover, hypotheses for the loss of function of the most common haplotype in elite European germplasm are discussed.
format article
topic_facet F30 - Génétique et amélioration des plantes
Triticum turgidum
Triticum aestivum
Triticum
Transcription génique
germoplasme
http://aims.fao.org/aos/agrovoc/c_7958
http://aims.fao.org/aos/agrovoc/c_7951
http://aims.fao.org/aos/agrovoc/c_7950
http://aims.fao.org/aos/agrovoc/c_35128
http://aims.fao.org/aos/agrovoc/c_3249
author Cormier, Fabien
Throude, Mickaël
Ravel, Catherine
Le Gouis, Jacques
Leveugle, Magalie
Lafarge, Stéphane
Exbrayat, Florence
Duranton, Nadine
Praud, Sébastien
author_facet Cormier, Fabien
Throude, Mickaël
Ravel, Catherine
Le Gouis, Jacques
Leveugle, Magalie
Lafarge, Stéphane
Exbrayat, Florence
Duranton, Nadine
Praud, Sébastien
author_sort Cormier, Fabien
title Detection of NAM-A1 natural variants in bread wheat reveals differences in haplotype distribution between a worldwide core collection and european elite germplasm
title_short Detection of NAM-A1 natural variants in bread wheat reveals differences in haplotype distribution between a worldwide core collection and european elite germplasm
title_full Detection of NAM-A1 natural variants in bread wheat reveals differences in haplotype distribution between a worldwide core collection and european elite germplasm
title_fullStr Detection of NAM-A1 natural variants in bread wheat reveals differences in haplotype distribution between a worldwide core collection and european elite germplasm
title_full_unstemmed Detection of NAM-A1 natural variants in bread wheat reveals differences in haplotype distribution between a worldwide core collection and european elite germplasm
title_sort detection of nam-a1 natural variants in bread wheat reveals differences in haplotype distribution between a worldwide core collection and european elite germplasm
url http://agritrop.cirad.fr/587090/
http://agritrop.cirad.fr/587090/1/NAM-A1.pdf
work_keys_str_mv AT cormierfabien detectionofnama1naturalvariantsinbreadwheatrevealsdifferencesinhaplotypedistributionbetweenaworldwidecorecollectionandeuropeanelitegermplasm
AT throudemickael detectionofnama1naturalvariantsinbreadwheatrevealsdifferencesinhaplotypedistributionbetweenaworldwidecorecollectionandeuropeanelitegermplasm
AT ravelcatherine detectionofnama1naturalvariantsinbreadwheatrevealsdifferencesinhaplotypedistributionbetweenaworldwidecorecollectionandeuropeanelitegermplasm
AT legouisjacques detectionofnama1naturalvariantsinbreadwheatrevealsdifferencesinhaplotypedistributionbetweenaworldwidecorecollectionandeuropeanelitegermplasm
AT leveuglemagalie detectionofnama1naturalvariantsinbreadwheatrevealsdifferencesinhaplotypedistributionbetweenaworldwidecorecollectionandeuropeanelitegermplasm
AT lafargestephane detectionofnama1naturalvariantsinbreadwheatrevealsdifferencesinhaplotypedistributionbetweenaworldwidecorecollectionandeuropeanelitegermplasm
AT exbrayatflorence detectionofnama1naturalvariantsinbreadwheatrevealsdifferencesinhaplotypedistributionbetweenaworldwidecorecollectionandeuropeanelitegermplasm
AT durantonnadine detectionofnama1naturalvariantsinbreadwheatrevealsdifferencesinhaplotypedistributionbetweenaworldwidecorecollectionandeuropeanelitegermplasm
AT praudsebastien detectionofnama1naturalvariantsinbreadwheatrevealsdifferencesinhaplotypedistributionbetweenaworldwidecorecollectionandeuropeanelitegermplasm
_version_ 1792499436918669312