Phylogenetic relationships and molecular delimitation of Culicoides Latreille (Diptera: Ceratopogonidae) species in the Afrotropical region: interest for the subgenus Avaritia

Phylogenetic relationships of Culicoides species of the Afrotropical region are problematic as different authors disagree on the placement of species into specific subgenera or groups. In this study we sequenced two mitochondrial (COI and 16S rDNA) and two nuclear (CAD and 28S rDNA) gene fragments to reconstruct phylogenetic relationships within the Avaritia, Remmia and Synhelea subgenera and the Milnei, Neavei and Similis groups of Culicoides using both Bayesian inference and maximum-likelihood approaches. Based on phylogenetic trees, we used the bGMYC (Bayesian General Mixed Yule Coalescent model) and the PTP (Bayesian Poisson Tree Processes) to investigate species boundaries. All species relationships within the studied subgenera and groups were well-supported by using morphological characters and molecular analyses. The subgenus Avaritia includes (i) all of the species of the Imicola group, as well as the putative new species, C. sp. #22, and we confirmed the monophyly of this group; (ii) the Dasyops group includes C. kanagai and C. sp. #54 Meiswinkel (new species), shown to be monophyletic; (iii) the C. sp. #20 belongs to the Orientalis group; (iv) C. grahamii, C. gulbenkiani and C. kibatiensis. Our results also show that subgenus Remmia is monophyletic. Relationships of species of the Milnei group were well-supported and demonstrate the monophyly of this group. Borkent's classification for Similis group is confirmed. In addition, C. neavei and C. ovalis (Neavei group) are placed in the subgenus Synhelea.

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Main Authors: Bakhoum, Mame Thierno, Labuschagne, Karien, Huber, Karine, Fall, Moussa, Mathieu, Bruno, Venter, Gert J., Gardes, Laëtitia, Baldet, Thierry, Bouyer, Jérémy, Fall, Assane Gueye, Gimonneau, Geoffrey, Garros, Claire
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Language:eng
Subjects:L72 - Organismes nuisibles des animaux, http://aims.fao.org/aos/agrovoc/c_165,
Online Access:http://agritrop.cirad.fr/585766/
http://agritrop.cirad.fr/585766/7/BAKHOUM_et_al-2018-Systematic_Entomology.pdf
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spelling dig-cirad-fr-5857662022-03-18T15:44:07Z http://agritrop.cirad.fr/585766/ http://agritrop.cirad.fr/585766/ Phylogenetic relationships and molecular delimitation of Culicoides Latreille (Diptera: Ceratopogonidae) species in the Afrotropical region: interest for the subgenus Avaritia. Bakhoum Mame Thierno, Labuschagne Karien, Huber Karine, Fall Moussa, Mathieu Bruno, Venter Gert J., Gardes Laëtitia, Baldet Thierry, Bouyer Jérémy, Fall Assane Gueye, Gimonneau Geoffrey, Garros Claire. 2018. Systematic Entomology, 43 (2) : 355-371.https://doi.org/10.1111/syen.12279 <https://doi.org/10.1111/syen.12279> Researchers Phylogenetic relationships and molecular delimitation of Culicoides Latreille (Diptera: Ceratopogonidae) species in the Afrotropical region: interest for the subgenus Avaritia Bakhoum, Mame Thierno Labuschagne, Karien Huber, Karine Fall, Moussa Mathieu, Bruno Venter, Gert J. Gardes, Laëtitia Baldet, Thierry Bouyer, Jérémy Fall, Assane Gueye Gimonneau, Geoffrey Garros, Claire eng 2018 Systematic Entomology L72 - Organismes nuisibles des animaux Afrique http://aims.fao.org/aos/agrovoc/c_165 Phylogenetic relationships of Culicoides species of the Afrotropical region are problematic as different authors disagree on the placement of species into specific subgenera or groups. In this study we sequenced two mitochondrial (COI and 16S rDNA) and two nuclear (CAD and 28S rDNA) gene fragments to reconstruct phylogenetic relationships within the Avaritia, Remmia and Synhelea subgenera and the Milnei, Neavei and Similis groups of Culicoides using both Bayesian inference and maximum-likelihood approaches. Based on phylogenetic trees, we used the bGMYC (Bayesian General Mixed Yule Coalescent model) and the PTP (Bayesian Poisson Tree Processes) to investigate species boundaries. All species relationships within the studied subgenera and groups were well-supported by using morphological characters and molecular analyses. The subgenus Avaritia includes (i) all of the species of the Imicola group, as well as the putative new species, C. sp. #22, and we confirmed the monophyly of this group; (ii) the Dasyops group includes C. kanagai and C. sp. #54 Meiswinkel (new species), shown to be monophyletic; (iii) the C. sp. #20 belongs to the Orientalis group; (iv) C. grahamii, C. gulbenkiani and C. kibatiensis. Our results also show that subgenus Remmia is monophyletic. Relationships of species of the Milnei group were well-supported and demonstrate the monophyly of this group. Borkent's classification for Similis group is confirmed. In addition, C. neavei and C. ovalis (Neavei group) are placed in the subgenus Synhelea. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/585766/7/BAKHOUM_et_al-2018-Systematic_Entomology.pdf text Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1111/syen.12279 10.1111/syen.12279 info:eu-repo/semantics/altIdentifier/doi/10.1111/syen.12279 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1111/syen.12279
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic L72 - Organismes nuisibles des animaux
http://aims.fao.org/aos/agrovoc/c_165
L72 - Organismes nuisibles des animaux
http://aims.fao.org/aos/agrovoc/c_165
spellingShingle L72 - Organismes nuisibles des animaux
http://aims.fao.org/aos/agrovoc/c_165
L72 - Organismes nuisibles des animaux
http://aims.fao.org/aos/agrovoc/c_165
Bakhoum, Mame Thierno
Labuschagne, Karien
Huber, Karine
Fall, Moussa
Mathieu, Bruno
Venter, Gert J.
Gardes, Laëtitia
Baldet, Thierry
Bouyer, Jérémy
Fall, Assane Gueye
Gimonneau, Geoffrey
Garros, Claire
Phylogenetic relationships and molecular delimitation of Culicoides Latreille (Diptera: Ceratopogonidae) species in the Afrotropical region: interest for the subgenus Avaritia
description Phylogenetic relationships of Culicoides species of the Afrotropical region are problematic as different authors disagree on the placement of species into specific subgenera or groups. In this study we sequenced two mitochondrial (COI and 16S rDNA) and two nuclear (CAD and 28S rDNA) gene fragments to reconstruct phylogenetic relationships within the Avaritia, Remmia and Synhelea subgenera and the Milnei, Neavei and Similis groups of Culicoides using both Bayesian inference and maximum-likelihood approaches. Based on phylogenetic trees, we used the bGMYC (Bayesian General Mixed Yule Coalescent model) and the PTP (Bayesian Poisson Tree Processes) to investigate species boundaries. All species relationships within the studied subgenera and groups were well-supported by using morphological characters and molecular analyses. The subgenus Avaritia includes (i) all of the species of the Imicola group, as well as the putative new species, C. sp. #22, and we confirmed the monophyly of this group; (ii) the Dasyops group includes C. kanagai and C. sp. #54 Meiswinkel (new species), shown to be monophyletic; (iii) the C. sp. #20 belongs to the Orientalis group; (iv) C. grahamii, C. gulbenkiani and C. kibatiensis. Our results also show that subgenus Remmia is monophyletic. Relationships of species of the Milnei group were well-supported and demonstrate the monophyly of this group. Borkent's classification for Similis group is confirmed. In addition, C. neavei and C. ovalis (Neavei group) are placed in the subgenus Synhelea.
format article
topic_facet L72 - Organismes nuisibles des animaux
http://aims.fao.org/aos/agrovoc/c_165
author Bakhoum, Mame Thierno
Labuschagne, Karien
Huber, Karine
Fall, Moussa
Mathieu, Bruno
Venter, Gert J.
Gardes, Laëtitia
Baldet, Thierry
Bouyer, Jérémy
Fall, Assane Gueye
Gimonneau, Geoffrey
Garros, Claire
author_facet Bakhoum, Mame Thierno
Labuschagne, Karien
Huber, Karine
Fall, Moussa
Mathieu, Bruno
Venter, Gert J.
Gardes, Laëtitia
Baldet, Thierry
Bouyer, Jérémy
Fall, Assane Gueye
Gimonneau, Geoffrey
Garros, Claire
author_sort Bakhoum, Mame Thierno
title Phylogenetic relationships and molecular delimitation of Culicoides Latreille (Diptera: Ceratopogonidae) species in the Afrotropical region: interest for the subgenus Avaritia
title_short Phylogenetic relationships and molecular delimitation of Culicoides Latreille (Diptera: Ceratopogonidae) species in the Afrotropical region: interest for the subgenus Avaritia
title_full Phylogenetic relationships and molecular delimitation of Culicoides Latreille (Diptera: Ceratopogonidae) species in the Afrotropical region: interest for the subgenus Avaritia
title_fullStr Phylogenetic relationships and molecular delimitation of Culicoides Latreille (Diptera: Ceratopogonidae) species in the Afrotropical region: interest for the subgenus Avaritia
title_full_unstemmed Phylogenetic relationships and molecular delimitation of Culicoides Latreille (Diptera: Ceratopogonidae) species in the Afrotropical region: interest for the subgenus Avaritia
title_sort phylogenetic relationships and molecular delimitation of culicoides latreille (diptera: ceratopogonidae) species in the afrotropical region: interest for the subgenus avaritia
url http://agritrop.cirad.fr/585766/
http://agritrop.cirad.fr/585766/7/BAKHOUM_et_al-2018-Systematic_Entomology.pdf
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