Nitrogen fixation in a chemoautotrophic lucinid symbiosis

The shallow water bivalve Codakia orbicularis lives in symbiotic association with a sulfur-oxidizing bacterium in its gills. The endosymbiont fixes CO2 and thus generates organic carbon compounds, which support the host's growth. To investigate the uncultured symbiont's metabolism and symbiont–host interactions in detail we conducted a proteogenomic analysis of purified bacteria. Unexpectedly, our results reveal a hitherto completely unrecognized feature of the C. orbicularis symbiont's physiology: the symbiont's genome encodes all proteins necessary for biological nitrogen fixation (diazotrophy). Expression of the respective genes under standard ambient conditions was confirmed by proteomics. Nitrogenase activity in the symbiont was also verified by enzyme activity assays. Phylogenetic analysis of the bacterial nitrogenase reductase NifH revealed the symbiont's close relationship to free-living nitrogen-fixing Proteobacteria from the seagrass sediment. The C. orbicularis symbiont, here tentatively named 'Candidatus Thiodiazotropha endolucinida', may thus not only sustain the bivalve's carbon demands. C. orbicularis may also benefit from a steady supply of fixed nitrogen from its symbiont—a scenario that is unprecedented in comparable chemoautotrophic symbioses.

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Main Authors: König, Sten, Gros, Olivier, Heiden, Stefan E., Hinzke, Tjorven, Thürmer, Thomas, Poehlein, Anja, Meyer, Susann, Vatin, Magalie, Mbéguié-A-Mbéguié, Didier, Tocny, Jennifer, Ponnudurai, Ruby, Daniel, Rolf, Becher, Dörte, Schweder, Thomas, Markert, Stephanie
Format: article biblioteca
Language:eng
Subjects:M40 - Écologie aquatique, Fixation de l'azote, Codakia orbicularis, symbiose, Bivalvia, activité enzymatique, symbiote, diazotrophie, http://aims.fao.org/aos/agrovoc/c_5196, http://aims.fao.org/aos/agrovoc/c_48452, http://aims.fao.org/aos/agrovoc/c_7563, http://aims.fao.org/aos/agrovoc/c_942, http://aims.fao.org/aos/agrovoc/c_2604, http://aims.fao.org/aos/agrovoc/c_7562, http://aims.fao.org/aos/agrovoc/c_27500,
Online Access:http://agritrop.cirad.fr/584642/
http://agritrop.cirad.fr/584642/1/Nitrogen%20Fixation%20Bivalve_Nat%20Microbiology%202017.pdf
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spelling dig-cirad-fr-5846422024-01-29T05:39:32Z http://agritrop.cirad.fr/584642/ http://agritrop.cirad.fr/584642/ Nitrogen fixation in a chemoautotrophic lucinid symbiosis. König Sten, Gros Olivier, Heiden Stefan E., Hinzke Tjorven, Thürmer Thomas, Poehlein Anja, Meyer Susann, Vatin Magalie, Mbéguié-A-Mbéguié Didier, Tocny Jennifer, Ponnudurai Ruby, Daniel Rolf, Becher Dörte, Schweder Thomas, Markert Stephanie. 2017. Nature Microbiology, 2 (1):e16193, 10 p.https://doi.org/10.1038/nmicrobiol.2016.193 <https://doi.org/10.1038/nmicrobiol.2016.193> Nitrogen fixation in a chemoautotrophic lucinid symbiosis König, Sten Gros, Olivier Heiden, Stefan E. Hinzke, Tjorven Thürmer, Thomas Poehlein, Anja Meyer, Susann Vatin, Magalie Mbéguié-A-Mbéguié, Didier Tocny, Jennifer Ponnudurai, Ruby Daniel, Rolf Becher, Dörte Schweder, Thomas Markert, Stephanie eng 2017 Nature Microbiology M40 - Écologie aquatique Fixation de l'azote Codakia orbicularis symbiose Bivalvia activité enzymatique symbiote diazotrophie http://aims.fao.org/aos/agrovoc/c_5196 http://aims.fao.org/aos/agrovoc/c_48452 http://aims.fao.org/aos/agrovoc/c_7563 http://aims.fao.org/aos/agrovoc/c_942 http://aims.fao.org/aos/agrovoc/c_2604 http://aims.fao.org/aos/agrovoc/c_7562 http://aims.fao.org/aos/agrovoc/c_27500 The shallow water bivalve Codakia orbicularis lives in symbiotic association with a sulfur-oxidizing bacterium in its gills. The endosymbiont fixes CO2 and thus generates organic carbon compounds, which support the host's growth. To investigate the uncultured symbiont's metabolism and symbiont–host interactions in detail we conducted a proteogenomic analysis of purified bacteria. Unexpectedly, our results reveal a hitherto completely unrecognized feature of the C. orbicularis symbiont's physiology: the symbiont's genome encodes all proteins necessary for biological nitrogen fixation (diazotrophy). Expression of the respective genes under standard ambient conditions was confirmed by proteomics. Nitrogenase activity in the symbiont was also verified by enzyme activity assays. Phylogenetic analysis of the bacterial nitrogenase reductase NifH revealed the symbiont's close relationship to free-living nitrogen-fixing Proteobacteria from the seagrass sediment. The C. orbicularis symbiont, here tentatively named 'Candidatus Thiodiazotropha endolucinida', may thus not only sustain the bivalve's carbon demands. C. orbicularis may also benefit from a steady supply of fixed nitrogen from its symbiont—a scenario that is unprecedented in comparable chemoautotrophic symbioses. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/584642/1/Nitrogen%20Fixation%20Bivalve_Nat%20Microbiology%202017.pdf text Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1038/nmicrobiol.2016.193 10.1038/nmicrobiol.2016.193 info:eu-repo/semantics/altIdentifier/doi/10.1038/nmicrobiol.2016.193 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1038/nmicrobiol.2016.193 info:eu-repo/grantAgreement/EC/FP7/264774//(EU) Molecular Ecology and Evolution of Bacterial Symbionts/SYMBIOMICS
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic M40 - Écologie aquatique
Fixation de l'azote
Codakia orbicularis
symbiose
Bivalvia
activité enzymatique
symbiote
diazotrophie
http://aims.fao.org/aos/agrovoc/c_5196
http://aims.fao.org/aos/agrovoc/c_48452
http://aims.fao.org/aos/agrovoc/c_7563
http://aims.fao.org/aos/agrovoc/c_942
http://aims.fao.org/aos/agrovoc/c_2604
http://aims.fao.org/aos/agrovoc/c_7562
http://aims.fao.org/aos/agrovoc/c_27500
M40 - Écologie aquatique
Fixation de l'azote
Codakia orbicularis
symbiose
Bivalvia
activité enzymatique
symbiote
diazotrophie
http://aims.fao.org/aos/agrovoc/c_5196
http://aims.fao.org/aos/agrovoc/c_48452
http://aims.fao.org/aos/agrovoc/c_7563
http://aims.fao.org/aos/agrovoc/c_942
http://aims.fao.org/aos/agrovoc/c_2604
http://aims.fao.org/aos/agrovoc/c_7562
http://aims.fao.org/aos/agrovoc/c_27500
spellingShingle M40 - Écologie aquatique
Fixation de l'azote
Codakia orbicularis
symbiose
Bivalvia
activité enzymatique
symbiote
diazotrophie
http://aims.fao.org/aos/agrovoc/c_5196
http://aims.fao.org/aos/agrovoc/c_48452
http://aims.fao.org/aos/agrovoc/c_7563
http://aims.fao.org/aos/agrovoc/c_942
http://aims.fao.org/aos/agrovoc/c_2604
http://aims.fao.org/aos/agrovoc/c_7562
http://aims.fao.org/aos/agrovoc/c_27500
M40 - Écologie aquatique
Fixation de l'azote
Codakia orbicularis
symbiose
Bivalvia
activité enzymatique
symbiote
diazotrophie
http://aims.fao.org/aos/agrovoc/c_5196
http://aims.fao.org/aos/agrovoc/c_48452
http://aims.fao.org/aos/agrovoc/c_7563
http://aims.fao.org/aos/agrovoc/c_942
http://aims.fao.org/aos/agrovoc/c_2604
http://aims.fao.org/aos/agrovoc/c_7562
http://aims.fao.org/aos/agrovoc/c_27500
König, Sten
Gros, Olivier
Heiden, Stefan E.
Hinzke, Tjorven
Thürmer, Thomas
Poehlein, Anja
Meyer, Susann
Vatin, Magalie
Mbéguié-A-Mbéguié, Didier
Tocny, Jennifer
Ponnudurai, Ruby
Daniel, Rolf
Becher, Dörte
Schweder, Thomas
Markert, Stephanie
Nitrogen fixation in a chemoautotrophic lucinid symbiosis
description The shallow water bivalve Codakia orbicularis lives in symbiotic association with a sulfur-oxidizing bacterium in its gills. The endosymbiont fixes CO2 and thus generates organic carbon compounds, which support the host's growth. To investigate the uncultured symbiont's metabolism and symbiont–host interactions in detail we conducted a proteogenomic analysis of purified bacteria. Unexpectedly, our results reveal a hitherto completely unrecognized feature of the C. orbicularis symbiont's physiology: the symbiont's genome encodes all proteins necessary for biological nitrogen fixation (diazotrophy). Expression of the respective genes under standard ambient conditions was confirmed by proteomics. Nitrogenase activity in the symbiont was also verified by enzyme activity assays. Phylogenetic analysis of the bacterial nitrogenase reductase NifH revealed the symbiont's close relationship to free-living nitrogen-fixing Proteobacteria from the seagrass sediment. The C. orbicularis symbiont, here tentatively named 'Candidatus Thiodiazotropha endolucinida', may thus not only sustain the bivalve's carbon demands. C. orbicularis may also benefit from a steady supply of fixed nitrogen from its symbiont—a scenario that is unprecedented in comparable chemoautotrophic symbioses.
format article
topic_facet M40 - Écologie aquatique
Fixation de l'azote
Codakia orbicularis
symbiose
Bivalvia
activité enzymatique
symbiote
diazotrophie
http://aims.fao.org/aos/agrovoc/c_5196
http://aims.fao.org/aos/agrovoc/c_48452
http://aims.fao.org/aos/agrovoc/c_7563
http://aims.fao.org/aos/agrovoc/c_942
http://aims.fao.org/aos/agrovoc/c_2604
http://aims.fao.org/aos/agrovoc/c_7562
http://aims.fao.org/aos/agrovoc/c_27500
author König, Sten
Gros, Olivier
Heiden, Stefan E.
Hinzke, Tjorven
Thürmer, Thomas
Poehlein, Anja
Meyer, Susann
Vatin, Magalie
Mbéguié-A-Mbéguié, Didier
Tocny, Jennifer
Ponnudurai, Ruby
Daniel, Rolf
Becher, Dörte
Schweder, Thomas
Markert, Stephanie
author_facet König, Sten
Gros, Olivier
Heiden, Stefan E.
Hinzke, Tjorven
Thürmer, Thomas
Poehlein, Anja
Meyer, Susann
Vatin, Magalie
Mbéguié-A-Mbéguié, Didier
Tocny, Jennifer
Ponnudurai, Ruby
Daniel, Rolf
Becher, Dörte
Schweder, Thomas
Markert, Stephanie
author_sort König, Sten
title Nitrogen fixation in a chemoautotrophic lucinid symbiosis
title_short Nitrogen fixation in a chemoautotrophic lucinid symbiosis
title_full Nitrogen fixation in a chemoautotrophic lucinid symbiosis
title_fullStr Nitrogen fixation in a chemoautotrophic lucinid symbiosis
title_full_unstemmed Nitrogen fixation in a chemoautotrophic lucinid symbiosis
title_sort nitrogen fixation in a chemoautotrophic lucinid symbiosis
url http://agritrop.cirad.fr/584642/
http://agritrop.cirad.fr/584642/1/Nitrogen%20Fixation%20Bivalve_Nat%20Microbiology%202017.pdf
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