Detection of molecular changes induced by antibiotics in Escherichia coli using vibrational spectroscopy

This study aimed to test Raman (400–1800 cm− 1) and Infra-red (1900–500 cm− 1) spectroscopies followed by statistical analysis (principal component analysis) to detect molecular changes induced by antibiotics (ampicillin, cefotaxime – cell wall synthesis inhibitors, tetracycline – protein synthesis inhibitor, ciprofloxacin – DNA synthesis inhibitor) against Escherichia coli TOP10. In case of ampicillin and cefotaxime, a decrease in protein bands in both Raman (1240, 1660 cm− 1), and IR spectra (1230, 1530, 1630 cm− 1), and an increase in carbohydrate bands (1150, 1020 cm− 1) in IR spectra were observed. Tetracycline addition caused an increase in nucleic acid bands (775, 1478, 1578 cm− 1), a sharp decrease in phenylalanine (995 cm− 1) in Raman spectra and the amide I and amide II bands (1630, 1530 cm− 1) in IR spectra, an increase in DNA in both Raman (1083 cm− 1) and IR spectra (1080 cm− 1). Regarding ciprofloxacin, an increase in nucleic acids (775, 1478, 1578 cm− 1) in Raman spectra and in protein bands (1230, 1520, 1630 cm− 1), in DNA (1080 cm− 1) in IR spectra were detected. Clear discrimination of antibiotic-treated samples compared to the control was recorded, showing that Raman and IR spectroscopies, coupled to principal component analysis for data, could be used to detect molecular modifications in bacteria exposed to different classes of antibiotics. These findings contribute to the understanding of the mechanisms of action of antibiotics in bacteria.

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Main Authors: Nguyen, Ngoc Thanh Xuan, Sarter, Samira, Nguyen, N. Hai, Daniel, Philippe
Format: article biblioteca
Language:eng
Subjects:U30 - Méthodes de recherche, L73 - Maladies des animaux, 000 - Autres thèmes, antibiotique, Escherichia coli, céfotaxime, spectroscopie, adn, méthode statistique, Résistance aux antibiotiques, http://aims.fao.org/aos/agrovoc/c_492, http://aims.fao.org/aos/agrovoc/c_33700, http://aims.fao.org/aos/agrovoc/c_36175, http://aims.fao.org/aos/agrovoc/c_14498, http://aims.fao.org/aos/agrovoc/c_2347, http://aims.fao.org/aos/agrovoc/c_7377, http://aims.fao.org/aos/agrovoc/c_8848,
Online Access:http://agritrop.cirad.fr/584260/
http://agritrop.cirad.fr/584260/1/Xuan%202017-Spectrochimica.pdf
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spelling dig-cirad-fr-5842602024-01-29T05:39:08Z http://agritrop.cirad.fr/584260/ http://agritrop.cirad.fr/584260/ Detection of molecular changes induced by antibiotics in Escherichia coli using vibrational spectroscopy. Nguyen Ngoc Thanh Xuan, Sarter Samira, Nguyen N. Hai, Daniel Philippe. 2017. Spectrochimica Acta. Part A, Molecular and Biomolecular Spectroscopy, 183 : 395-401.https://doi.org/10.1016/j.saa.2017.04.077 <https://doi.org/10.1016/j.saa.2017.04.077> Detection of molecular changes induced by antibiotics in Escherichia coli using vibrational spectroscopy Nguyen, Ngoc Thanh Xuan Sarter, Samira Nguyen, N. Hai Daniel, Philippe eng 2017 Spectrochimica Acta. Part A, Molecular and Biomolecular Spectroscopy U30 - Méthodes de recherche L73 - Maladies des animaux 000 - Autres thèmes antibiotique Escherichia coli céfotaxime spectroscopie adn méthode statistique Résistance aux antibiotiques http://aims.fao.org/aos/agrovoc/c_492 http://aims.fao.org/aos/agrovoc/c_33700 http://aims.fao.org/aos/agrovoc/c_36175 http://aims.fao.org/aos/agrovoc/c_14498 http://aims.fao.org/aos/agrovoc/c_2347 http://aims.fao.org/aos/agrovoc/c_7377 http://aims.fao.org/aos/agrovoc/c_8848 This study aimed to test Raman (400–1800 cm− 1) and Infra-red (1900–500 cm− 1) spectroscopies followed by statistical analysis (principal component analysis) to detect molecular changes induced by antibiotics (ampicillin, cefotaxime – cell wall synthesis inhibitors, tetracycline – protein synthesis inhibitor, ciprofloxacin – DNA synthesis inhibitor) against Escherichia coli TOP10. In case of ampicillin and cefotaxime, a decrease in protein bands in both Raman (1240, 1660 cm− 1), and IR spectra (1230, 1530, 1630 cm− 1), and an increase in carbohydrate bands (1150, 1020 cm− 1) in IR spectra were observed. Tetracycline addition caused an increase in nucleic acid bands (775, 1478, 1578 cm− 1), a sharp decrease in phenylalanine (995 cm− 1) in Raman spectra and the amide I and amide II bands (1630, 1530 cm− 1) in IR spectra, an increase in DNA in both Raman (1083 cm− 1) and IR spectra (1080 cm− 1). Regarding ciprofloxacin, an increase in nucleic acids (775, 1478, 1578 cm− 1) in Raman spectra and in protein bands (1230, 1520, 1630 cm− 1), in DNA (1080 cm− 1) in IR spectra were detected. Clear discrimination of antibiotic-treated samples compared to the control was recorded, showing that Raman and IR spectroscopies, coupled to principal component analysis for data, could be used to detect molecular modifications in bacteria exposed to different classes of antibiotics. These findings contribute to the understanding of the mechanisms of action of antibiotics in bacteria. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/acceptedVersion http://agritrop.cirad.fr/584260/1/Xuan%202017-Spectrochimica.pdf text Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1016/j.saa.2017.04.077 10.1016/j.saa.2017.04.077 info:eu-repo/semantics/altIdentifier/doi/10.1016/j.saa.2017.04.077 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1016/j.saa.2017.04.077
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic U30 - Méthodes de recherche
L73 - Maladies des animaux
000 - Autres thèmes
antibiotique
Escherichia coli
céfotaxime
spectroscopie
adn
méthode statistique
Résistance aux antibiotiques
http://aims.fao.org/aos/agrovoc/c_492
http://aims.fao.org/aos/agrovoc/c_33700
http://aims.fao.org/aos/agrovoc/c_36175
http://aims.fao.org/aos/agrovoc/c_14498
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_8848
U30 - Méthodes de recherche
L73 - Maladies des animaux
000 - Autres thèmes
antibiotique
Escherichia coli
céfotaxime
spectroscopie
adn
méthode statistique
Résistance aux antibiotiques
http://aims.fao.org/aos/agrovoc/c_492
http://aims.fao.org/aos/agrovoc/c_33700
http://aims.fao.org/aos/agrovoc/c_36175
http://aims.fao.org/aos/agrovoc/c_14498
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_8848
spellingShingle U30 - Méthodes de recherche
L73 - Maladies des animaux
000 - Autres thèmes
antibiotique
Escherichia coli
céfotaxime
spectroscopie
adn
méthode statistique
Résistance aux antibiotiques
http://aims.fao.org/aos/agrovoc/c_492
http://aims.fao.org/aos/agrovoc/c_33700
http://aims.fao.org/aos/agrovoc/c_36175
http://aims.fao.org/aos/agrovoc/c_14498
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_8848
U30 - Méthodes de recherche
L73 - Maladies des animaux
000 - Autres thèmes
antibiotique
Escherichia coli
céfotaxime
spectroscopie
adn
méthode statistique
Résistance aux antibiotiques
http://aims.fao.org/aos/agrovoc/c_492
http://aims.fao.org/aos/agrovoc/c_33700
http://aims.fao.org/aos/agrovoc/c_36175
http://aims.fao.org/aos/agrovoc/c_14498
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_8848
Nguyen, Ngoc Thanh Xuan
Sarter, Samira
Nguyen, N. Hai
Daniel, Philippe
Detection of molecular changes induced by antibiotics in Escherichia coli using vibrational spectroscopy
description This study aimed to test Raman (400–1800 cm− 1) and Infra-red (1900–500 cm− 1) spectroscopies followed by statistical analysis (principal component analysis) to detect molecular changes induced by antibiotics (ampicillin, cefotaxime – cell wall synthesis inhibitors, tetracycline – protein synthesis inhibitor, ciprofloxacin – DNA synthesis inhibitor) against Escherichia coli TOP10. In case of ampicillin and cefotaxime, a decrease in protein bands in both Raman (1240, 1660 cm− 1), and IR spectra (1230, 1530, 1630 cm− 1), and an increase in carbohydrate bands (1150, 1020 cm− 1) in IR spectra were observed. Tetracycline addition caused an increase in nucleic acid bands (775, 1478, 1578 cm− 1), a sharp decrease in phenylalanine (995 cm− 1) in Raman spectra and the amide I and amide II bands (1630, 1530 cm− 1) in IR spectra, an increase in DNA in both Raman (1083 cm− 1) and IR spectra (1080 cm− 1). Regarding ciprofloxacin, an increase in nucleic acids (775, 1478, 1578 cm− 1) in Raman spectra and in protein bands (1230, 1520, 1630 cm− 1), in DNA (1080 cm− 1) in IR spectra were detected. Clear discrimination of antibiotic-treated samples compared to the control was recorded, showing that Raman and IR spectroscopies, coupled to principal component analysis for data, could be used to detect molecular modifications in bacteria exposed to different classes of antibiotics. These findings contribute to the understanding of the mechanisms of action of antibiotics in bacteria.
format article
topic_facet U30 - Méthodes de recherche
L73 - Maladies des animaux
000 - Autres thèmes
antibiotique
Escherichia coli
céfotaxime
spectroscopie
adn
méthode statistique
Résistance aux antibiotiques
http://aims.fao.org/aos/agrovoc/c_492
http://aims.fao.org/aos/agrovoc/c_33700
http://aims.fao.org/aos/agrovoc/c_36175
http://aims.fao.org/aos/agrovoc/c_14498
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_8848
author Nguyen, Ngoc Thanh Xuan
Sarter, Samira
Nguyen, N. Hai
Daniel, Philippe
author_facet Nguyen, Ngoc Thanh Xuan
Sarter, Samira
Nguyen, N. Hai
Daniel, Philippe
author_sort Nguyen, Ngoc Thanh Xuan
title Detection of molecular changes induced by antibiotics in Escherichia coli using vibrational spectroscopy
title_short Detection of molecular changes induced by antibiotics in Escherichia coli using vibrational spectroscopy
title_full Detection of molecular changes induced by antibiotics in Escherichia coli using vibrational spectroscopy
title_fullStr Detection of molecular changes induced by antibiotics in Escherichia coli using vibrational spectroscopy
title_full_unstemmed Detection of molecular changes induced by antibiotics in Escherichia coli using vibrational spectroscopy
title_sort detection of molecular changes induced by antibiotics in escherichia coli using vibrational spectroscopy
url http://agritrop.cirad.fr/584260/
http://agritrop.cirad.fr/584260/1/Xuan%202017-Spectrochimica.pdf
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AT sartersamira detectionofmolecularchangesinducedbyantibioticsinescherichiacoliusingvibrationalspectroscopy
AT nguyennhai detectionofmolecularchangesinducedbyantibioticsinescherichiacoliusingvibrationalspectroscopy
AT danielphilippe detectionofmolecularchangesinducedbyantibioticsinescherichiacoliusingvibrationalspectroscopy
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