Complete genome sequences of cowpea polerovirus 1 and cowpea polerovirus 2 infecting cowpea plants in Burkina Faso

The full-length genome sequences of two novel poleroviruses found infecting cowpea plants, cowpea polerovirus 1 (CPPV1) and cowpea polerovirus 2 (CPPV2), were determined using overlapping RT-PCR and RACE-PCR. Whereas the 5845-nt CPPV1 genome was most similar to chickpea chlorotic stunt virus (73% identity), the 5945-nt CPPV2 genome was most similar to phasey bean mild yellow virus (86% identity). The CPPV1 and CPPV2 genomes both have a typical polerovirus genome organization. Phylogenetic analysis of the inferred P1-P2 and P3 amino acid sequences confirmed that CPPV1 and CPPV2 are indeed poleroviruses. Four apparently unique recombination events were detected within a dataset of 12 full polerovirus genome sequences, including two events in the CPPV2 genome. Based on the current species demarcation criteria for the family Luteoviridae, we tentatively propose that CPPV1 and CPPV2 should be considered members of novel polerovirus species.

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Main Authors: Palanga, Essowé, Martin, Darren Patrick, Galzi, Serge, Zabré, Jean, Bouda, Zakaria, Bouma Neya, James, Sawadogo, Mahamadou, Traoré, Oumar, Peterschmitt, Michel, Roumagnac, Philippe, Filloux, Denis
Format: article biblioteca
Language:eng
Subjects:H20 - Maladies des plantes, http://aims.fao.org/aos/agrovoc/c_8081,
Online Access:http://agritrop.cirad.fr/584058/
http://agritrop.cirad.fr/584058/7/art%253A10.1007%252Fs00705-017-3327-z-edite.pdf
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spelling dig-cirad-fr-5840582022-03-30T11:54:41Z http://agritrop.cirad.fr/584058/ http://agritrop.cirad.fr/584058/ Complete genome sequences of cowpea polerovirus 1 and cowpea polerovirus 2 infecting cowpea plants in Burkina Faso. Palanga Essowé, Martin Darren Patrick, Galzi Serge, Zabré Jean, Bouda Zakaria, Bouma Neya James, Sawadogo Mahamadou, Traoré Oumar, Peterschmitt Michel, Roumagnac Philippe, Filloux Denis. 2017. Archives of Virology, 162 (7) : 2149-2152.https://doi.org/10.1007/s00705-017-3327-z <https://doi.org/10.1007/s00705-017-3327-z> Researchers Complete genome sequences of cowpea polerovirus 1 and cowpea polerovirus 2 infecting cowpea plants in Burkina Faso Palanga, Essowé Martin, Darren Patrick Galzi, Serge Zabré, Jean Bouda, Zakaria Bouma Neya, James Sawadogo, Mahamadou Traoré, Oumar Peterschmitt, Michel Roumagnac, Philippe Filloux, Denis eng 2017 Archives of Virology H20 - Maladies des plantes Burkina Faso http://aims.fao.org/aos/agrovoc/c_8081 The full-length genome sequences of two novel poleroviruses found infecting cowpea plants, cowpea polerovirus 1 (CPPV1) and cowpea polerovirus 2 (CPPV2), were determined using overlapping RT-PCR and RACE-PCR. Whereas the 5845-nt CPPV1 genome was most similar to chickpea chlorotic stunt virus (73% identity), the 5945-nt CPPV2 genome was most similar to phasey bean mild yellow virus (86% identity). The CPPV1 and CPPV2 genomes both have a typical polerovirus genome organization. Phylogenetic analysis of the inferred P1-P2 and P3 amino acid sequences confirmed that CPPV1 and CPPV2 are indeed poleroviruses. Four apparently unique recombination events were detected within a dataset of 12 full polerovirus genome sequences, including two events in the CPPV2 genome. Based on the current species demarcation criteria for the family Luteoviridae, we tentatively propose that CPPV1 and CPPV2 should be considered members of novel polerovirus species. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/584058/7/art%253A10.1007%252Fs00705-017-3327-z-edite.pdf text Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1007/s00705-017-3327-z 10.1007/s00705-017-3327-z info:eu-repo/semantics/altIdentifier/doi/10.1007/s00705-017-3327-z info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1007/s00705-017-3327-z
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic H20 - Maladies des plantes
http://aims.fao.org/aos/agrovoc/c_8081
H20 - Maladies des plantes
http://aims.fao.org/aos/agrovoc/c_8081
spellingShingle H20 - Maladies des plantes
http://aims.fao.org/aos/agrovoc/c_8081
H20 - Maladies des plantes
http://aims.fao.org/aos/agrovoc/c_8081
Palanga, Essowé
Martin, Darren Patrick
Galzi, Serge
Zabré, Jean
Bouda, Zakaria
Bouma Neya, James
Sawadogo, Mahamadou
Traoré, Oumar
Peterschmitt, Michel
Roumagnac, Philippe
Filloux, Denis
Complete genome sequences of cowpea polerovirus 1 and cowpea polerovirus 2 infecting cowpea plants in Burkina Faso
description The full-length genome sequences of two novel poleroviruses found infecting cowpea plants, cowpea polerovirus 1 (CPPV1) and cowpea polerovirus 2 (CPPV2), were determined using overlapping RT-PCR and RACE-PCR. Whereas the 5845-nt CPPV1 genome was most similar to chickpea chlorotic stunt virus (73% identity), the 5945-nt CPPV2 genome was most similar to phasey bean mild yellow virus (86% identity). The CPPV1 and CPPV2 genomes both have a typical polerovirus genome organization. Phylogenetic analysis of the inferred P1-P2 and P3 amino acid sequences confirmed that CPPV1 and CPPV2 are indeed poleroviruses. Four apparently unique recombination events were detected within a dataset of 12 full polerovirus genome sequences, including two events in the CPPV2 genome. Based on the current species demarcation criteria for the family Luteoviridae, we tentatively propose that CPPV1 and CPPV2 should be considered members of novel polerovirus species.
format article
topic_facet H20 - Maladies des plantes
http://aims.fao.org/aos/agrovoc/c_8081
author Palanga, Essowé
Martin, Darren Patrick
Galzi, Serge
Zabré, Jean
Bouda, Zakaria
Bouma Neya, James
Sawadogo, Mahamadou
Traoré, Oumar
Peterschmitt, Michel
Roumagnac, Philippe
Filloux, Denis
author_facet Palanga, Essowé
Martin, Darren Patrick
Galzi, Serge
Zabré, Jean
Bouda, Zakaria
Bouma Neya, James
Sawadogo, Mahamadou
Traoré, Oumar
Peterschmitt, Michel
Roumagnac, Philippe
Filloux, Denis
author_sort Palanga, Essowé
title Complete genome sequences of cowpea polerovirus 1 and cowpea polerovirus 2 infecting cowpea plants in Burkina Faso
title_short Complete genome sequences of cowpea polerovirus 1 and cowpea polerovirus 2 infecting cowpea plants in Burkina Faso
title_full Complete genome sequences of cowpea polerovirus 1 and cowpea polerovirus 2 infecting cowpea plants in Burkina Faso
title_fullStr Complete genome sequences of cowpea polerovirus 1 and cowpea polerovirus 2 infecting cowpea plants in Burkina Faso
title_full_unstemmed Complete genome sequences of cowpea polerovirus 1 and cowpea polerovirus 2 infecting cowpea plants in Burkina Faso
title_sort complete genome sequences of cowpea polerovirus 1 and cowpea polerovirus 2 infecting cowpea plants in burkina faso
url http://agritrop.cirad.fr/584058/
http://agritrop.cirad.fr/584058/7/art%253A10.1007%252Fs00705-017-3327-z-edite.pdf
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