Automated efficient computation of crown transparency from tree silhouette images

The transparency of trees is the most important indicator for a forest health assessment. This paper presents an efficient method for calculating the crown transparency coefficient from tree binary images. This coefficient is based on the automated quantification of the deep indentation, macro-hole and micro-hole densities. Circular structuring elements are introduced, among other things, to automatically find the significant biological size. The symmetric tree convex hull and the tree smoothed contour are defined to delineate the reference areas necessary to evaluate the above-mentioned densities. Statistical thresholds are proposed to eliminate human operator subjectivity, especially in the automated identification of anatomical elements such as soft and deep crown-indentations or macro and micro crown-holes. A point-wise transparency map is produced to better appreciate the origin of the visible skylight areas in the crown. The crown micro-hole density is calculated from the 0.1-to-0.5 transparency points, the crown macro-hole density from the 0.5-to-1 transparency points. We finally opt for weighting of the above three densities with regard to the importance of the symptoms they describe for a more relevant crown transparency coefficient. A comparative study on several trees from full-size and half-size binary images showed that our method is similar overall to the DSO and less sensitive to scale reduction.

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Main Authors: Borianne, Philippe, Subsol, Gérard, Caraglio, Yves
Format: article biblioteca
Language:eng
Subjects:F50 - Anatomie et morphologie des plantes, F62 - Physiologie végétale - Croissance et développement, K01 - Foresterie - Considérations générales, U10 - Informatique, mathématiques et statistiques, U30 - Méthodes de recherche, forêt, forêt tropicale, Houppier, morphologie végétale, lumière, densité du peuplement, feuillage, densité, santé des plantes, mesure (activité), méthode statistique, imagerie, arbre forestier, http://aims.fao.org/aos/agrovoc/c_3062, http://aims.fao.org/aos/agrovoc/c_24904, http://aims.fao.org/aos/agrovoc/c_16172, http://aims.fao.org/aos/agrovoc/c_13434, http://aims.fao.org/aos/agrovoc/c_4322, http://aims.fao.org/aos/agrovoc/c_35781, http://aims.fao.org/aos/agrovoc/c_36752, http://aims.fao.org/aos/agrovoc/c_2186, http://aims.fao.org/aos/agrovoc/c_25398, http://aims.fao.org/aos/agrovoc/c_4668, http://aims.fao.org/aos/agrovoc/c_7377, http://aims.fao.org/aos/agrovoc/c_36760, http://aims.fao.org/aos/agrovoc/c_3052,
Online Access:http://agritrop.cirad.fr/583513/
http://agritrop.cirad.fr/583513/1/1-s2.0-S0168169916306469-main.pdf
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spelling dig-cirad-fr-5835132024-01-29T00:03:01Z http://agritrop.cirad.fr/583513/ http://agritrop.cirad.fr/583513/ Automated efficient computation of crown transparency from tree silhouette images. Borianne Philippe, Subsol Gérard, Caraglio Yves. 2017. Computers and Electronics in Agriculture, 133 : 108-118.https://doi.org/10.1016/j.compag.2016.12.011 <https://doi.org/10.1016/j.compag.2016.12.011> Automated efficient computation of crown transparency from tree silhouette images Borianne, Philippe Subsol, Gérard Caraglio, Yves eng 2017 Computers and Electronics in Agriculture F50 - Anatomie et morphologie des plantes F62 - Physiologie végétale - Croissance et développement K01 - Foresterie - Considérations générales U10 - Informatique, mathématiques et statistiques U30 - Méthodes de recherche forêt forêt tropicale Houppier morphologie végétale lumière densité du peuplement feuillage densité santé des plantes mesure (activité) méthode statistique imagerie arbre forestier http://aims.fao.org/aos/agrovoc/c_3062 http://aims.fao.org/aos/agrovoc/c_24904 http://aims.fao.org/aos/agrovoc/c_16172 http://aims.fao.org/aos/agrovoc/c_13434 http://aims.fao.org/aos/agrovoc/c_4322 http://aims.fao.org/aos/agrovoc/c_35781 http://aims.fao.org/aos/agrovoc/c_36752 http://aims.fao.org/aos/agrovoc/c_2186 http://aims.fao.org/aos/agrovoc/c_25398 http://aims.fao.org/aos/agrovoc/c_4668 http://aims.fao.org/aos/agrovoc/c_7377 http://aims.fao.org/aos/agrovoc/c_36760 http://aims.fao.org/aos/agrovoc/c_3052 The transparency of trees is the most important indicator for a forest health assessment. This paper presents an efficient method for calculating the crown transparency coefficient from tree binary images. This coefficient is based on the automated quantification of the deep indentation, macro-hole and micro-hole densities. Circular structuring elements are introduced, among other things, to automatically find the significant biological size. The symmetric tree convex hull and the tree smoothed contour are defined to delineate the reference areas necessary to evaluate the above-mentioned densities. Statistical thresholds are proposed to eliminate human operator subjectivity, especially in the automated identification of anatomical elements such as soft and deep crown-indentations or macro and micro crown-holes. A point-wise transparency map is produced to better appreciate the origin of the visible skylight areas in the crown. The crown micro-hole density is calculated from the 0.1-to-0.5 transparency points, the crown macro-hole density from the 0.5-to-1 transparency points. We finally opt for weighting of the above three densities with regard to the importance of the symptoms they describe for a more relevant crown transparency coefficient. A comparative study on several trees from full-size and half-size binary images showed that our method is similar overall to the DSO and less sensitive to scale reduction. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/583513/1/1-s2.0-S0168169916306469-main.pdf text Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1016/j.compag.2016.12.011 10.1016/j.compag.2016.12.011 info:eu-repo/semantics/altIdentifier/doi/10.1016/j.compag.2016.12.011 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1016/j.compag.2016.12.011
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F50 - Anatomie et morphologie des plantes
F62 - Physiologie végétale - Croissance et développement
K01 - Foresterie - Considérations générales
U10 - Informatique, mathématiques et statistiques
U30 - Méthodes de recherche
forêt
forêt tropicale
Houppier
morphologie végétale
lumière
densité du peuplement
feuillage
densité
santé des plantes
mesure (activité)
méthode statistique
imagerie
arbre forestier
http://aims.fao.org/aos/agrovoc/c_3062
http://aims.fao.org/aos/agrovoc/c_24904
http://aims.fao.org/aos/agrovoc/c_16172
http://aims.fao.org/aos/agrovoc/c_13434
http://aims.fao.org/aos/agrovoc/c_4322
http://aims.fao.org/aos/agrovoc/c_35781
http://aims.fao.org/aos/agrovoc/c_36752
http://aims.fao.org/aos/agrovoc/c_2186
http://aims.fao.org/aos/agrovoc/c_25398
http://aims.fao.org/aos/agrovoc/c_4668
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_36760
http://aims.fao.org/aos/agrovoc/c_3052
F50 - Anatomie et morphologie des plantes
F62 - Physiologie végétale - Croissance et développement
K01 - Foresterie - Considérations générales
U10 - Informatique, mathématiques et statistiques
U30 - Méthodes de recherche
forêt
forêt tropicale
Houppier
morphologie végétale
lumière
densité du peuplement
feuillage
densité
santé des plantes
mesure (activité)
méthode statistique
imagerie
arbre forestier
http://aims.fao.org/aos/agrovoc/c_3062
http://aims.fao.org/aos/agrovoc/c_24904
http://aims.fao.org/aos/agrovoc/c_16172
http://aims.fao.org/aos/agrovoc/c_13434
http://aims.fao.org/aos/agrovoc/c_4322
http://aims.fao.org/aos/agrovoc/c_35781
http://aims.fao.org/aos/agrovoc/c_36752
http://aims.fao.org/aos/agrovoc/c_2186
http://aims.fao.org/aos/agrovoc/c_25398
http://aims.fao.org/aos/agrovoc/c_4668
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_36760
http://aims.fao.org/aos/agrovoc/c_3052
spellingShingle F50 - Anatomie et morphologie des plantes
F62 - Physiologie végétale - Croissance et développement
K01 - Foresterie - Considérations générales
U10 - Informatique, mathématiques et statistiques
U30 - Méthodes de recherche
forêt
forêt tropicale
Houppier
morphologie végétale
lumière
densité du peuplement
feuillage
densité
santé des plantes
mesure (activité)
méthode statistique
imagerie
arbre forestier
http://aims.fao.org/aos/agrovoc/c_3062
http://aims.fao.org/aos/agrovoc/c_24904
http://aims.fao.org/aos/agrovoc/c_16172
http://aims.fao.org/aos/agrovoc/c_13434
http://aims.fao.org/aos/agrovoc/c_4322
http://aims.fao.org/aos/agrovoc/c_35781
http://aims.fao.org/aos/agrovoc/c_36752
http://aims.fao.org/aos/agrovoc/c_2186
http://aims.fao.org/aos/agrovoc/c_25398
http://aims.fao.org/aos/agrovoc/c_4668
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_36760
http://aims.fao.org/aos/agrovoc/c_3052
F50 - Anatomie et morphologie des plantes
F62 - Physiologie végétale - Croissance et développement
K01 - Foresterie - Considérations générales
U10 - Informatique, mathématiques et statistiques
U30 - Méthodes de recherche
forêt
forêt tropicale
Houppier
morphologie végétale
lumière
densité du peuplement
feuillage
densité
santé des plantes
mesure (activité)
méthode statistique
imagerie
arbre forestier
http://aims.fao.org/aos/agrovoc/c_3062
http://aims.fao.org/aos/agrovoc/c_24904
http://aims.fao.org/aos/agrovoc/c_16172
http://aims.fao.org/aos/agrovoc/c_13434
http://aims.fao.org/aos/agrovoc/c_4322
http://aims.fao.org/aos/agrovoc/c_35781
http://aims.fao.org/aos/agrovoc/c_36752
http://aims.fao.org/aos/agrovoc/c_2186
http://aims.fao.org/aos/agrovoc/c_25398
http://aims.fao.org/aos/agrovoc/c_4668
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_36760
http://aims.fao.org/aos/agrovoc/c_3052
Borianne, Philippe
Subsol, Gérard
Caraglio, Yves
Automated efficient computation of crown transparency from tree silhouette images
description The transparency of trees is the most important indicator for a forest health assessment. This paper presents an efficient method for calculating the crown transparency coefficient from tree binary images. This coefficient is based on the automated quantification of the deep indentation, macro-hole and micro-hole densities. Circular structuring elements are introduced, among other things, to automatically find the significant biological size. The symmetric tree convex hull and the tree smoothed contour are defined to delineate the reference areas necessary to evaluate the above-mentioned densities. Statistical thresholds are proposed to eliminate human operator subjectivity, especially in the automated identification of anatomical elements such as soft and deep crown-indentations or macro and micro crown-holes. A point-wise transparency map is produced to better appreciate the origin of the visible skylight areas in the crown. The crown micro-hole density is calculated from the 0.1-to-0.5 transparency points, the crown macro-hole density from the 0.5-to-1 transparency points. We finally opt for weighting of the above three densities with regard to the importance of the symptoms they describe for a more relevant crown transparency coefficient. A comparative study on several trees from full-size and half-size binary images showed that our method is similar overall to the DSO and less sensitive to scale reduction.
format article
topic_facet F50 - Anatomie et morphologie des plantes
F62 - Physiologie végétale - Croissance et développement
K01 - Foresterie - Considérations générales
U10 - Informatique, mathématiques et statistiques
U30 - Méthodes de recherche
forêt
forêt tropicale
Houppier
morphologie végétale
lumière
densité du peuplement
feuillage
densité
santé des plantes
mesure (activité)
méthode statistique
imagerie
arbre forestier
http://aims.fao.org/aos/agrovoc/c_3062
http://aims.fao.org/aos/agrovoc/c_24904
http://aims.fao.org/aos/agrovoc/c_16172
http://aims.fao.org/aos/agrovoc/c_13434
http://aims.fao.org/aos/agrovoc/c_4322
http://aims.fao.org/aos/agrovoc/c_35781
http://aims.fao.org/aos/agrovoc/c_36752
http://aims.fao.org/aos/agrovoc/c_2186
http://aims.fao.org/aos/agrovoc/c_25398
http://aims.fao.org/aos/agrovoc/c_4668
http://aims.fao.org/aos/agrovoc/c_7377
http://aims.fao.org/aos/agrovoc/c_36760
http://aims.fao.org/aos/agrovoc/c_3052
author Borianne, Philippe
Subsol, Gérard
Caraglio, Yves
author_facet Borianne, Philippe
Subsol, Gérard
Caraglio, Yves
author_sort Borianne, Philippe
title Automated efficient computation of crown transparency from tree silhouette images
title_short Automated efficient computation of crown transparency from tree silhouette images
title_full Automated efficient computation of crown transparency from tree silhouette images
title_fullStr Automated efficient computation of crown transparency from tree silhouette images
title_full_unstemmed Automated efficient computation of crown transparency from tree silhouette images
title_sort automated efficient computation of crown transparency from tree silhouette images
url http://agritrop.cirad.fr/583513/
http://agritrop.cirad.fr/583513/1/1-s2.0-S0168169916306469-main.pdf
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