Are genetics and epigenetic instabilities of plant embryogenic cells a fatality? The experience of coffee somatic embryogenesis

In plants, undifferentiated or totally differentiated cells can be easily in vitro cultured to generate undifferentiated embryogenic cells that can regenerate complete plants. This is the most spectacular expression of totipotency. Embryogenic cells represent a key material in plant biotechnologies as they are used in many processes aiming at asexual reproduction by somatic embryogenesis (SE), genetic transformation, protoplast regeneration and cryopreservation. Nevertheless, tissue culture systems that involve the acquisition of competence for totipotency and extensive cell division remain risky with respect to genome and epigenome instabilities. Particularly, the use of embryogenic cell suspensions has frequently been associated with an increased likelihood of genetic instability and somaclonal variation (SV) in the regenerated plants. SV is a major concern in all in vitro vegetative plant propagation systems because it leads to the loss of genetic fidelity. Since 20 years, embryogenic cell suspension based SE techniques have been applied to coffee for the large-scale dissemination of exceptional Arabica hybrids. Here, we present our production and research experience showing that SE is efficient and reliable for true-to-type propagation. Over 99% of coffee trees regenerated fully conform to the mother plant, both morphologically - they grow, flower and produce normally. Hence strong genetic and epigenetic changes in proliferating embryogenic cells are not a fatality. The results also demonstrated the importance of embryogenic culture age on SV and hence the non-random nature of this phenomenon. The genetic and epigenetic alterations are particularly limited during SE. The main change in most of phenotypic variants was aneuploidy showing that mitotic aberrations play a major role in SV in coffee. These results provide a proof of concept for the use of embryogenic cell suspensions with other plant species: a revolution in the world of plant micropropagation on an industrial scale.

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Main Authors: Etienne, Hervé, Bertrand, Benoît, Dechamp, Eveline, Maurel, Patrick, Georget, Frederic, Guyot, Romain, Breitler, Jean-Christophe
Format: article biblioteca
Language:eng
Subjects:F30 - Génétique et amélioration des plantes, F02 - Multiplication végétative des plantes, F60 - Physiologie et biochimie végétale, Coffea arabica, embryon somatique, cellule somatique, variation somaclonale, génétique, amélioration des plantes, stabilité génétique, culture in vitro, micropropagation, culture d'embryon, Embryogénèse somatique, multiplication végétative, variété, totipotence, http://aims.fao.org/aos/agrovoc/c_1721, http://aims.fao.org/aos/agrovoc/c_27607, http://aims.fao.org/aos/agrovoc/c_24568, http://aims.fao.org/aos/agrovoc/c_34127, http://aims.fao.org/aos/agrovoc/c_3222, http://aims.fao.org/aos/agrovoc/c_5956, http://aims.fao.org/aos/agrovoc/c_16045, http://aims.fao.org/aos/agrovoc/c_24135, http://aims.fao.org/aos/agrovoc/c_24136, http://aims.fao.org/aos/agrovoc/c_2544, http://aims.fao.org/aos/agrovoc/c_36911, http://aims.fao.org/aos/agrovoc/c_8177, http://aims.fao.org/aos/agrovoc/c_8157, http://aims.fao.org/aos/agrovoc/c_10264,
Online Access:http://agritrop.cirad.fr/580450/
http://agritrop.cirad.fr/580450/1/Etienne%20et%20al%202016%20J%20of%20Human%20Genetics%20and%20Embryology.pdf
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id dig-cirad-fr-580450
record_format koha
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
F02 - Multiplication végétative des plantes
F60 - Physiologie et biochimie végétale
Coffea arabica
embryon somatique
cellule somatique
variation somaclonale
génétique
amélioration des plantes
stabilité génétique
culture in vitro
micropropagation
culture d'embryon
Embryogénèse somatique
multiplication végétative
variété
totipotence
http://aims.fao.org/aos/agrovoc/c_1721
http://aims.fao.org/aos/agrovoc/c_27607
http://aims.fao.org/aos/agrovoc/c_24568
http://aims.fao.org/aos/agrovoc/c_34127
http://aims.fao.org/aos/agrovoc/c_3222
http://aims.fao.org/aos/agrovoc/c_5956
http://aims.fao.org/aos/agrovoc/c_16045
http://aims.fao.org/aos/agrovoc/c_24135
http://aims.fao.org/aos/agrovoc/c_24136
http://aims.fao.org/aos/agrovoc/c_2544
http://aims.fao.org/aos/agrovoc/c_36911
http://aims.fao.org/aos/agrovoc/c_8177
http://aims.fao.org/aos/agrovoc/c_8157
http://aims.fao.org/aos/agrovoc/c_10264
F30 - Génétique et amélioration des plantes
F02 - Multiplication végétative des plantes
F60 - Physiologie et biochimie végétale
Coffea arabica
embryon somatique
cellule somatique
variation somaclonale
génétique
amélioration des plantes
stabilité génétique
culture in vitro
micropropagation
culture d'embryon
Embryogénèse somatique
multiplication végétative
variété
totipotence
http://aims.fao.org/aos/agrovoc/c_1721
http://aims.fao.org/aos/agrovoc/c_27607
http://aims.fao.org/aos/agrovoc/c_24568
http://aims.fao.org/aos/agrovoc/c_34127
http://aims.fao.org/aos/agrovoc/c_3222
http://aims.fao.org/aos/agrovoc/c_5956
http://aims.fao.org/aos/agrovoc/c_16045
http://aims.fao.org/aos/agrovoc/c_24135
http://aims.fao.org/aos/agrovoc/c_24136
http://aims.fao.org/aos/agrovoc/c_2544
http://aims.fao.org/aos/agrovoc/c_36911
http://aims.fao.org/aos/agrovoc/c_8177
http://aims.fao.org/aos/agrovoc/c_8157
http://aims.fao.org/aos/agrovoc/c_10264
spellingShingle F30 - Génétique et amélioration des plantes
F02 - Multiplication végétative des plantes
F60 - Physiologie et biochimie végétale
Coffea arabica
embryon somatique
cellule somatique
variation somaclonale
génétique
amélioration des plantes
stabilité génétique
culture in vitro
micropropagation
culture d'embryon
Embryogénèse somatique
multiplication végétative
variété
totipotence
http://aims.fao.org/aos/agrovoc/c_1721
http://aims.fao.org/aos/agrovoc/c_27607
http://aims.fao.org/aos/agrovoc/c_24568
http://aims.fao.org/aos/agrovoc/c_34127
http://aims.fao.org/aos/agrovoc/c_3222
http://aims.fao.org/aos/agrovoc/c_5956
http://aims.fao.org/aos/agrovoc/c_16045
http://aims.fao.org/aos/agrovoc/c_24135
http://aims.fao.org/aos/agrovoc/c_24136
http://aims.fao.org/aos/agrovoc/c_2544
http://aims.fao.org/aos/agrovoc/c_36911
http://aims.fao.org/aos/agrovoc/c_8177
http://aims.fao.org/aos/agrovoc/c_8157
http://aims.fao.org/aos/agrovoc/c_10264
F30 - Génétique et amélioration des plantes
F02 - Multiplication végétative des plantes
F60 - Physiologie et biochimie végétale
Coffea arabica
embryon somatique
cellule somatique
variation somaclonale
génétique
amélioration des plantes
stabilité génétique
culture in vitro
micropropagation
culture d'embryon
Embryogénèse somatique
multiplication végétative
variété
totipotence
http://aims.fao.org/aos/agrovoc/c_1721
http://aims.fao.org/aos/agrovoc/c_27607
http://aims.fao.org/aos/agrovoc/c_24568
http://aims.fao.org/aos/agrovoc/c_34127
http://aims.fao.org/aos/agrovoc/c_3222
http://aims.fao.org/aos/agrovoc/c_5956
http://aims.fao.org/aos/agrovoc/c_16045
http://aims.fao.org/aos/agrovoc/c_24135
http://aims.fao.org/aos/agrovoc/c_24136
http://aims.fao.org/aos/agrovoc/c_2544
http://aims.fao.org/aos/agrovoc/c_36911
http://aims.fao.org/aos/agrovoc/c_8177
http://aims.fao.org/aos/agrovoc/c_8157
http://aims.fao.org/aos/agrovoc/c_10264
Etienne, Hervé
Bertrand, Benoît
Dechamp, Eveline
Maurel, Patrick
Georget, Frederic
Guyot, Romain
Breitler, Jean-Christophe
Are genetics and epigenetic instabilities of plant embryogenic cells a fatality? The experience of coffee somatic embryogenesis
description In plants, undifferentiated or totally differentiated cells can be easily in vitro cultured to generate undifferentiated embryogenic cells that can regenerate complete plants. This is the most spectacular expression of totipotency. Embryogenic cells represent a key material in plant biotechnologies as they are used in many processes aiming at asexual reproduction by somatic embryogenesis (SE), genetic transformation, protoplast regeneration and cryopreservation. Nevertheless, tissue culture systems that involve the acquisition of competence for totipotency and extensive cell division remain risky with respect to genome and epigenome instabilities. Particularly, the use of embryogenic cell suspensions has frequently been associated with an increased likelihood of genetic instability and somaclonal variation (SV) in the regenerated plants. SV is a major concern in all in vitro vegetative plant propagation systems because it leads to the loss of genetic fidelity. Since 20 years, embryogenic cell suspension based SE techniques have been applied to coffee for the large-scale dissemination of exceptional Arabica hybrids. Here, we present our production and research experience showing that SE is efficient and reliable for true-to-type propagation. Over 99% of coffee trees regenerated fully conform to the mother plant, both morphologically - they grow, flower and produce normally. Hence strong genetic and epigenetic changes in proliferating embryogenic cells are not a fatality. The results also demonstrated the importance of embryogenic culture age on SV and hence the non-random nature of this phenomenon. The genetic and epigenetic alterations are particularly limited during SE. The main change in most of phenotypic variants was aneuploidy showing that mitotic aberrations play a major role in SV in coffee. These results provide a proof of concept for the use of embryogenic cell suspensions with other plant species: a revolution in the world of plant micropropagation on an industrial scale.
format article
topic_facet F30 - Génétique et amélioration des plantes
F02 - Multiplication végétative des plantes
F60 - Physiologie et biochimie végétale
Coffea arabica
embryon somatique
cellule somatique
variation somaclonale
génétique
amélioration des plantes
stabilité génétique
culture in vitro
micropropagation
culture d'embryon
Embryogénèse somatique
multiplication végétative
variété
totipotence
http://aims.fao.org/aos/agrovoc/c_1721
http://aims.fao.org/aos/agrovoc/c_27607
http://aims.fao.org/aos/agrovoc/c_24568
http://aims.fao.org/aos/agrovoc/c_34127
http://aims.fao.org/aos/agrovoc/c_3222
http://aims.fao.org/aos/agrovoc/c_5956
http://aims.fao.org/aos/agrovoc/c_16045
http://aims.fao.org/aos/agrovoc/c_24135
http://aims.fao.org/aos/agrovoc/c_24136
http://aims.fao.org/aos/agrovoc/c_2544
http://aims.fao.org/aos/agrovoc/c_36911
http://aims.fao.org/aos/agrovoc/c_8177
http://aims.fao.org/aos/agrovoc/c_8157
http://aims.fao.org/aos/agrovoc/c_10264
author Etienne, Hervé
Bertrand, Benoît
Dechamp, Eveline
Maurel, Patrick
Georget, Frederic
Guyot, Romain
Breitler, Jean-Christophe
author_facet Etienne, Hervé
Bertrand, Benoît
Dechamp, Eveline
Maurel, Patrick
Georget, Frederic
Guyot, Romain
Breitler, Jean-Christophe
author_sort Etienne, Hervé
title Are genetics and epigenetic instabilities of plant embryogenic cells a fatality? The experience of coffee somatic embryogenesis
title_short Are genetics and epigenetic instabilities of plant embryogenic cells a fatality? The experience of coffee somatic embryogenesis
title_full Are genetics and epigenetic instabilities of plant embryogenic cells a fatality? The experience of coffee somatic embryogenesis
title_fullStr Are genetics and epigenetic instabilities of plant embryogenic cells a fatality? The experience of coffee somatic embryogenesis
title_full_unstemmed Are genetics and epigenetic instabilities of plant embryogenic cells a fatality? The experience of coffee somatic embryogenesis
title_sort are genetics and epigenetic instabilities of plant embryogenic cells a fatality? the experience of coffee somatic embryogenesis
url http://agritrop.cirad.fr/580450/
http://agritrop.cirad.fr/580450/1/Etienne%20et%20al%202016%20J%20of%20Human%20Genetics%20and%20Embryology.pdf
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spelling dig-cirad-fr-5804502024-01-28T23:28:38Z http://agritrop.cirad.fr/580450/ http://agritrop.cirad.fr/580450/ Are genetics and epigenetic instabilities of plant embryogenic cells a fatality? The experience of coffee somatic embryogenesis. Etienne Hervé, Bertrand Benoît, Dechamp Eveline, Maurel Patrick, Georget Frederic, Guyot Romain, Breitler Jean-Christophe. 2016. Human Genetics and Embryology, 6 (136), 5 p.https://doi.org/10.4172/2161-0436.1000136 <https://doi.org/10.4172/2161-0436.1000136> Are genetics and epigenetic instabilities of plant embryogenic cells a fatality? The experience of coffee somatic embryogenesis Etienne, Hervé Bertrand, Benoît Dechamp, Eveline Maurel, Patrick Georget, Frederic Guyot, Romain Breitler, Jean-Christophe eng 2016 Human Genetics and Embryology F30 - Génétique et amélioration des plantes F02 - Multiplication végétative des plantes F60 - Physiologie et biochimie végétale Coffea arabica embryon somatique cellule somatique variation somaclonale génétique amélioration des plantes stabilité génétique culture in vitro micropropagation culture d'embryon Embryogénèse somatique multiplication végétative variété totipotence http://aims.fao.org/aos/agrovoc/c_1721 http://aims.fao.org/aos/agrovoc/c_27607 http://aims.fao.org/aos/agrovoc/c_24568 http://aims.fao.org/aos/agrovoc/c_34127 http://aims.fao.org/aos/agrovoc/c_3222 http://aims.fao.org/aos/agrovoc/c_5956 http://aims.fao.org/aos/agrovoc/c_16045 http://aims.fao.org/aos/agrovoc/c_24135 http://aims.fao.org/aos/agrovoc/c_24136 http://aims.fao.org/aos/agrovoc/c_2544 http://aims.fao.org/aos/agrovoc/c_36911 http://aims.fao.org/aos/agrovoc/c_8177 http://aims.fao.org/aos/agrovoc/c_8157 http://aims.fao.org/aos/agrovoc/c_10264 In plants, undifferentiated or totally differentiated cells can be easily in vitro cultured to generate undifferentiated embryogenic cells that can regenerate complete plants. This is the most spectacular expression of totipotency. Embryogenic cells represent a key material in plant biotechnologies as they are used in many processes aiming at asexual reproduction by somatic embryogenesis (SE), genetic transformation, protoplast regeneration and cryopreservation. Nevertheless, tissue culture systems that involve the acquisition of competence for totipotency and extensive cell division remain risky with respect to genome and epigenome instabilities. Particularly, the use of embryogenic cell suspensions has frequently been associated with an increased likelihood of genetic instability and somaclonal variation (SV) in the regenerated plants. SV is a major concern in all in vitro vegetative plant propagation systems because it leads to the loss of genetic fidelity. Since 20 years, embryogenic cell suspension based SE techniques have been applied to coffee for the large-scale dissemination of exceptional Arabica hybrids. Here, we present our production and research experience showing that SE is efficient and reliable for true-to-type propagation. Over 99% of coffee trees regenerated fully conform to the mother plant, both morphologically - they grow, flower and produce normally. Hence strong genetic and epigenetic changes in proliferating embryogenic cells are not a fatality. The results also demonstrated the importance of embryogenic culture age on SV and hence the non-random nature of this phenomenon. The genetic and epigenetic alterations are particularly limited during SE. The main change in most of phenotypic variants was aneuploidy showing that mitotic aberrations play a major role in SV in coffee. These results provide a proof of concept for the use of embryogenic cell suspensions with other plant species: a revolution in the world of plant micropropagation on an industrial scale. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/580450/1/Etienne%20et%20al%202016%20J%20of%20Human%20Genetics%20and%20Embryology.pdf text cc_0 info:eu-repo/semantics/openAccess https://creativecommons.org/publicdomain/zero/1.0/ https://doi.org/10.4172/2161-0436.1000136 10.4172/2161-0436.1000136 info:eu-repo/semantics/altIdentifier/doi/10.4172/2161-0436.1000136 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.4172/2161-0436.1000136