Avian influenza and Newcastle disease in poultry in Mali: epidemiological investigations and modelling for improved surveillance and control

Since its first detection in Southern China in 1996, highly pathogenic avian influenza virus (HPAIV) H5N1 has emerged as a major global health threat and spread across three continents. In Africa, Mali was considered a country at high risk and surveillance of HPAIV H5N1 was complicated by the endemicity of another highly lethal poultry virus producing similar symptoms, Newcastle disease virus (NDV). The general aim of this thesis was to improve our understanding of the epidemiology of avian influenza (AI) and Newcastle disease (ND) in Mali and produce recommendations for improving the surveillance and control of these diseases. Prevalence/incidence studies showed: a low circulation of AI viruses (AIVs) -although higher in villages located in the inner delta of the Niger River where large populations of wild water birds migrate- and seemingly no particular epidemiological role of domestic ducks; a high circulation of NDV influenced by seasonal, geographic and flock (number of Guinea fowl, access to a pond) factors. Poultry production and trade studies revealed: a largely informal commercial poultry sector, mainly peri-urban and of low biosecurity level; characteristics of village poultry farming more (free-roaming, inadequate quarantine and sick/dead bird disposal) or less (high ND vaccination coverage, low palmipeds' density) favourable for AIVs and NDV transmission; mainly rudimentary low-biosecurity live poultry markets and a hierarchical structure of poultry trade network to/from the Sikasso district with four hubs identified based on network centrality measures. Evaluation of HPAI and ND surveillance found: a well-organised surveillance network but functioning only moderately satisfactorily, lack of targeting of active surveillance and largely insufficient sensitivity of passive surveillance. Specific strengths (laboratory diagnostic, information dissemination) were identified, as well as weaknesses some of which are easily correctable (data management, efficiency follow-up) while others require significant funding or commitment (resources for field work, involvement of private animal health professionals).

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Bibliographic Details
Main Author: Molia, Sophie
Format: thesis biblioteca
Language:eng
Published: Royal Veterinary College
Subjects:L73 - Maladies des animaux, Influenzavirus aviaire, maladie de Newcastle, aviculture, surveillance épidémiologique, modèle de simulation, épidémiologie, contrôle de maladies, volaille, modèle, grippe aviaire, virus maladie de newcastle, Paramyxovirus aviaire, http://aims.fao.org/aos/agrovoc/c_9017, http://aims.fao.org/aos/agrovoc/c_5165, http://aims.fao.org/aos/agrovoc/c_742, http://aims.fao.org/aos/agrovoc/c_16411, http://aims.fao.org/aos/agrovoc/c_24242, http://aims.fao.org/aos/agrovoc/c_2615, http://aims.fao.org/aos/agrovoc/c_2327, http://aims.fao.org/aos/agrovoc/c_6145, http://aims.fao.org/aos/agrovoc/c_4881, http://aims.fao.org/aos/agrovoc/c_331337, http://aims.fao.org/aos/agrovoc/c_5166, http://aims.fao.org/aos/agrovoc/c_16388, http://aims.fao.org/aos/agrovoc/c_4540, http://aims.fao.org/aos/agrovoc/c_165,
Online Access:http://agritrop.cirad.fr/578765/
http://agritrop.cirad.fr/578765/1/PhD_Thesis_Molia.pdf
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spelling dig-cirad-fr-5787652024-01-28T23:08:51Z http://agritrop.cirad.fr/578765/ http://agritrop.cirad.fr/578765/ Avian influenza and Newcastle disease in poultry in Mali: epidemiological investigations and modelling for improved surveillance and control. Molia Sophie. 2015. Londres : Royal Veterinary College, 255 p. Thesis Ph. D. : Royal Veterinary College Avian influenza and Newcastle disease in poultry in Mali: epidemiological investigations and modelling for improved surveillance and control Molia, Sophie eng 2015 Royal Veterinary College L73 - Maladies des animaux Influenzavirus aviaire maladie de Newcastle aviculture surveillance épidémiologique modèle de simulation épidémiologie contrôle de maladies volaille modèle grippe aviaire virus maladie de newcastle Paramyxovirus aviaire http://aims.fao.org/aos/agrovoc/c_9017 http://aims.fao.org/aos/agrovoc/c_5165 http://aims.fao.org/aos/agrovoc/c_742 http://aims.fao.org/aos/agrovoc/c_16411 http://aims.fao.org/aos/agrovoc/c_24242 http://aims.fao.org/aos/agrovoc/c_2615 http://aims.fao.org/aos/agrovoc/c_2327 http://aims.fao.org/aos/agrovoc/c_6145 http://aims.fao.org/aos/agrovoc/c_4881 http://aims.fao.org/aos/agrovoc/c_331337 http://aims.fao.org/aos/agrovoc/c_5166 http://aims.fao.org/aos/agrovoc/c_16388 Mali Afrique http://aims.fao.org/aos/agrovoc/c_4540 http://aims.fao.org/aos/agrovoc/c_165 Since its first detection in Southern China in 1996, highly pathogenic avian influenza virus (HPAIV) H5N1 has emerged as a major global health threat and spread across three continents. In Africa, Mali was considered a country at high risk and surveillance of HPAIV H5N1 was complicated by the endemicity of another highly lethal poultry virus producing similar symptoms, Newcastle disease virus (NDV). The general aim of this thesis was to improve our understanding of the epidemiology of avian influenza (AI) and Newcastle disease (ND) in Mali and produce recommendations for improving the surveillance and control of these diseases. Prevalence/incidence studies showed: a low circulation of AI viruses (AIVs) -although higher in villages located in the inner delta of the Niger River where large populations of wild water birds migrate- and seemingly no particular epidemiological role of domestic ducks; a high circulation of NDV influenced by seasonal, geographic and flock (number of Guinea fowl, access to a pond) factors. Poultry production and trade studies revealed: a largely informal commercial poultry sector, mainly peri-urban and of low biosecurity level; characteristics of village poultry farming more (free-roaming, inadequate quarantine and sick/dead bird disposal) or less (high ND vaccination coverage, low palmipeds' density) favourable for AIVs and NDV transmission; mainly rudimentary low-biosecurity live poultry markets and a hierarchical structure of poultry trade network to/from the Sikasso district with four hubs identified based on network centrality measures. Evaluation of HPAI and ND surveillance found: a well-organised surveillance network but functioning only moderately satisfactorily, lack of targeting of active surveillance and largely insufficient sensitivity of passive surveillance. Specific strengths (laboratory diagnostic, information dissemination) were identified, as well as weaknesses some of which are easily correctable (data management, efficiency follow-up) while others require significant funding or commitment (resources for field work, involvement of private animal health professionals). thesis info:eu-repo/semantics/doctoralThesis Thesis info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/578765/1/PhD_Thesis_Molia.pdf text Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic L73 - Maladies des animaux
Influenzavirus aviaire
maladie de Newcastle
aviculture
surveillance épidémiologique
modèle de simulation
épidémiologie
contrôle de maladies
volaille
modèle
grippe aviaire
virus maladie de newcastle
Paramyxovirus aviaire
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_5165
http://aims.fao.org/aos/agrovoc/c_742
http://aims.fao.org/aos/agrovoc/c_16411
http://aims.fao.org/aos/agrovoc/c_24242
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_2327
http://aims.fao.org/aos/agrovoc/c_6145
http://aims.fao.org/aos/agrovoc/c_4881
http://aims.fao.org/aos/agrovoc/c_331337
http://aims.fao.org/aos/agrovoc/c_5166
http://aims.fao.org/aos/agrovoc/c_16388
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_165
L73 - Maladies des animaux
Influenzavirus aviaire
maladie de Newcastle
aviculture
surveillance épidémiologique
modèle de simulation
épidémiologie
contrôle de maladies
volaille
modèle
grippe aviaire
virus maladie de newcastle
Paramyxovirus aviaire
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_5165
http://aims.fao.org/aos/agrovoc/c_742
http://aims.fao.org/aos/agrovoc/c_16411
http://aims.fao.org/aos/agrovoc/c_24242
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_2327
http://aims.fao.org/aos/agrovoc/c_6145
http://aims.fao.org/aos/agrovoc/c_4881
http://aims.fao.org/aos/agrovoc/c_331337
http://aims.fao.org/aos/agrovoc/c_5166
http://aims.fao.org/aos/agrovoc/c_16388
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_165
spellingShingle L73 - Maladies des animaux
Influenzavirus aviaire
maladie de Newcastle
aviculture
surveillance épidémiologique
modèle de simulation
épidémiologie
contrôle de maladies
volaille
modèle
grippe aviaire
virus maladie de newcastle
Paramyxovirus aviaire
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_5165
http://aims.fao.org/aos/agrovoc/c_742
http://aims.fao.org/aos/agrovoc/c_16411
http://aims.fao.org/aos/agrovoc/c_24242
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_2327
http://aims.fao.org/aos/agrovoc/c_6145
http://aims.fao.org/aos/agrovoc/c_4881
http://aims.fao.org/aos/agrovoc/c_331337
http://aims.fao.org/aos/agrovoc/c_5166
http://aims.fao.org/aos/agrovoc/c_16388
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_165
L73 - Maladies des animaux
Influenzavirus aviaire
maladie de Newcastle
aviculture
surveillance épidémiologique
modèle de simulation
épidémiologie
contrôle de maladies
volaille
modèle
grippe aviaire
virus maladie de newcastle
Paramyxovirus aviaire
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_5165
http://aims.fao.org/aos/agrovoc/c_742
http://aims.fao.org/aos/agrovoc/c_16411
http://aims.fao.org/aos/agrovoc/c_24242
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_2327
http://aims.fao.org/aos/agrovoc/c_6145
http://aims.fao.org/aos/agrovoc/c_4881
http://aims.fao.org/aos/agrovoc/c_331337
http://aims.fao.org/aos/agrovoc/c_5166
http://aims.fao.org/aos/agrovoc/c_16388
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_165
Molia, Sophie
Avian influenza and Newcastle disease in poultry in Mali: epidemiological investigations and modelling for improved surveillance and control
description Since its first detection in Southern China in 1996, highly pathogenic avian influenza virus (HPAIV) H5N1 has emerged as a major global health threat and spread across three continents. In Africa, Mali was considered a country at high risk and surveillance of HPAIV H5N1 was complicated by the endemicity of another highly lethal poultry virus producing similar symptoms, Newcastle disease virus (NDV). The general aim of this thesis was to improve our understanding of the epidemiology of avian influenza (AI) and Newcastle disease (ND) in Mali and produce recommendations for improving the surveillance and control of these diseases. Prevalence/incidence studies showed: a low circulation of AI viruses (AIVs) -although higher in villages located in the inner delta of the Niger River where large populations of wild water birds migrate- and seemingly no particular epidemiological role of domestic ducks; a high circulation of NDV influenced by seasonal, geographic and flock (number of Guinea fowl, access to a pond) factors. Poultry production and trade studies revealed: a largely informal commercial poultry sector, mainly peri-urban and of low biosecurity level; characteristics of village poultry farming more (free-roaming, inadequate quarantine and sick/dead bird disposal) or less (high ND vaccination coverage, low palmipeds' density) favourable for AIVs and NDV transmission; mainly rudimentary low-biosecurity live poultry markets and a hierarchical structure of poultry trade network to/from the Sikasso district with four hubs identified based on network centrality measures. Evaluation of HPAI and ND surveillance found: a well-organised surveillance network but functioning only moderately satisfactorily, lack of targeting of active surveillance and largely insufficient sensitivity of passive surveillance. Specific strengths (laboratory diagnostic, information dissemination) were identified, as well as weaknesses some of which are easily correctable (data management, efficiency follow-up) while others require significant funding or commitment (resources for field work, involvement of private animal health professionals).
format thesis
topic_facet L73 - Maladies des animaux
Influenzavirus aviaire
maladie de Newcastle
aviculture
surveillance épidémiologique
modèle de simulation
épidémiologie
contrôle de maladies
volaille
modèle
grippe aviaire
virus maladie de newcastle
Paramyxovirus aviaire
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_5165
http://aims.fao.org/aos/agrovoc/c_742
http://aims.fao.org/aos/agrovoc/c_16411
http://aims.fao.org/aos/agrovoc/c_24242
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_2327
http://aims.fao.org/aos/agrovoc/c_6145
http://aims.fao.org/aos/agrovoc/c_4881
http://aims.fao.org/aos/agrovoc/c_331337
http://aims.fao.org/aos/agrovoc/c_5166
http://aims.fao.org/aos/agrovoc/c_16388
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_165
author Molia, Sophie
author_facet Molia, Sophie
author_sort Molia, Sophie
title Avian influenza and Newcastle disease in poultry in Mali: epidemiological investigations and modelling for improved surveillance and control
title_short Avian influenza and Newcastle disease in poultry in Mali: epidemiological investigations and modelling for improved surveillance and control
title_full Avian influenza and Newcastle disease in poultry in Mali: epidemiological investigations and modelling for improved surveillance and control
title_fullStr Avian influenza and Newcastle disease in poultry in Mali: epidemiological investigations and modelling for improved surveillance and control
title_full_unstemmed Avian influenza and Newcastle disease in poultry in Mali: epidemiological investigations and modelling for improved surveillance and control
title_sort avian influenza and newcastle disease in poultry in mali: epidemiological investigations and modelling for improved surveillance and control
publisher Royal Veterinary College
url http://agritrop.cirad.fr/578765/
http://agritrop.cirad.fr/578765/1/PhD_Thesis_Molia.pdf
work_keys_str_mv AT moliasophie avianinfluenzaandnewcastlediseaseinpoultryinmaliepidemiologicalinvestigationsandmodellingforimprovedsurveillanceandcontrol
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