Inheritance and QTL mapping of leaf nutrient concentration in a cotton inter-specific derived RIL population

Developing and deploying cotton cultivars with high nutrient uptake, use efficiency and tolerance to nutrient related soil stresses is desirable to assist sustainable soil management. Genetic variation, heritability, selection response and quantitative trait loci (QTLs) were investigated for five macronutrients (P, K, Ca, Mg, S) and five micronutrients (Fe, Mn, B, Zn, and Cu) in a recombinant inbred line (RIL) population from an inter-specific cross between Gossypium hirsutum cv. Guazuncho 2, and G. barbadense accession VH8-4602. Na and K/Na ratio were also studied as the imbalance between Na and other nutrients is detrimental to cotton growth and development. The concentrations of nutrients were measured for different plant parts of the two parents and for leaf samples of the whole population collected at early to peak flowering in field experiments over two years in a sodic Vertosol soil. Parental contrast was large for most nutrient concentrations in leaves when compared with other plant parts. Segregation for leaf nutrient concentration was observed within the population with transgression for P, K, K/Na ratio and all micronutrients. Genotypic difference was the major factor behind within-population variation for most nutrients, while narrow sense heritability was moderate (0.27 for Mn and Cu, and 0.43 for B). At least one significant QTL was identified for each nutrient except K and more than half of those QTLs were clustered on chromosomes 14, 18 and 22. Selection response was predicted to be low for P and all micronutrients except B, high for K, Na and B, and very high for K/Na ratio. Correlations were more common between macronutrients, Na and K/Na ratio where the nature and strength of the relations varied (r=-0.69 to 0.76). We conclude that there is sufficient genetic diversity between these two tetraploid cotton species that could be exploited to improve cotton nutrient status by introgressing species-unique favourable alleles.

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Bibliographic Details
Main Authors: Liu, Shiming, Lacape, Jean-Marc, Constable, Greg A., Llewellyn, Danny
Format: article biblioteca
Language:eng
Subjects:F30 - Génétique et amélioration des plantes, F61 - Physiologie végétale - Nutrition, P35 - Fertilité du sol, Gossypium hirsutum, Gossypium barbadense, amélioration des plantes, physiologie de la nutrition, lignée, locus des caractères quantitatifs, héritabilité, feuille, carte génétique, phénotype, variation génétique, absorption de substances nutritives, substance nutritive, utilisation des nutriments, fertilité du sol, croissance, développement biologique, Vertisol, http://aims.fao.org/aos/agrovoc/c_3339, http://aims.fao.org/aos/agrovoc/c_3337, http://aims.fao.org/aos/agrovoc/c_5956, http://aims.fao.org/aos/agrovoc/c_5275, http://aims.fao.org/aos/agrovoc/c_29225, http://aims.fao.org/aos/agrovoc/c_37974, http://aims.fao.org/aos/agrovoc/c_3570, http://aims.fao.org/aos/agrovoc/c_4243, http://aims.fao.org/aos/agrovoc/c_24002, http://aims.fao.org/aos/agrovoc/c_5776, http://aims.fao.org/aos/agrovoc/c_15975, http://aims.fao.org/aos/agrovoc/c_5273, http://aims.fao.org/aos/agrovoc/c_5274, http://aims.fao.org/aos/agrovoc/c_36245, http://aims.fao.org/aos/agrovoc/c_7170, http://aims.fao.org/aos/agrovoc/c_3394, http://aims.fao.org/aos/agrovoc/c_921, http://aims.fao.org/aos/agrovoc/c_8199, http://aims.fao.org/aos/agrovoc/c_714,
Online Access:http://agritrop.cirad.fr/576072/
http://agritrop.cirad.fr/576072/1/576072.pdf
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id dig-cirad-fr-576072
record_format koha
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
F61 - Physiologie végétale - Nutrition
P35 - Fertilité du sol
Gossypium hirsutum
Gossypium barbadense
amélioration des plantes
physiologie de la nutrition
lignée
locus des caractères quantitatifs
héritabilité
feuille
carte génétique
phénotype
variation génétique
absorption de substances nutritives
substance nutritive
utilisation des nutriments
fertilité du sol
croissance
développement biologique
Vertisol
http://aims.fao.org/aos/agrovoc/c_3339
http://aims.fao.org/aos/agrovoc/c_3337
http://aims.fao.org/aos/agrovoc/c_5956
http://aims.fao.org/aos/agrovoc/c_5275
http://aims.fao.org/aos/agrovoc/c_29225
http://aims.fao.org/aos/agrovoc/c_37974
http://aims.fao.org/aos/agrovoc/c_3570
http://aims.fao.org/aos/agrovoc/c_4243
http://aims.fao.org/aos/agrovoc/c_24002
http://aims.fao.org/aos/agrovoc/c_5776
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_5273
http://aims.fao.org/aos/agrovoc/c_5274
http://aims.fao.org/aos/agrovoc/c_36245
http://aims.fao.org/aos/agrovoc/c_7170
http://aims.fao.org/aos/agrovoc/c_3394
http://aims.fao.org/aos/agrovoc/c_921
http://aims.fao.org/aos/agrovoc/c_8199
http://aims.fao.org/aos/agrovoc/c_714
F30 - Génétique et amélioration des plantes
F61 - Physiologie végétale - Nutrition
P35 - Fertilité du sol
Gossypium hirsutum
Gossypium barbadense
amélioration des plantes
physiologie de la nutrition
lignée
locus des caractères quantitatifs
héritabilité
feuille
carte génétique
phénotype
variation génétique
absorption de substances nutritives
substance nutritive
utilisation des nutriments
fertilité du sol
croissance
développement biologique
Vertisol
http://aims.fao.org/aos/agrovoc/c_3339
http://aims.fao.org/aos/agrovoc/c_3337
http://aims.fao.org/aos/agrovoc/c_5956
http://aims.fao.org/aos/agrovoc/c_5275
http://aims.fao.org/aos/agrovoc/c_29225
http://aims.fao.org/aos/agrovoc/c_37974
http://aims.fao.org/aos/agrovoc/c_3570
http://aims.fao.org/aos/agrovoc/c_4243
http://aims.fao.org/aos/agrovoc/c_24002
http://aims.fao.org/aos/agrovoc/c_5776
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_5273
http://aims.fao.org/aos/agrovoc/c_5274
http://aims.fao.org/aos/agrovoc/c_36245
http://aims.fao.org/aos/agrovoc/c_7170
http://aims.fao.org/aos/agrovoc/c_3394
http://aims.fao.org/aos/agrovoc/c_921
http://aims.fao.org/aos/agrovoc/c_8199
http://aims.fao.org/aos/agrovoc/c_714
spellingShingle F30 - Génétique et amélioration des plantes
F61 - Physiologie végétale - Nutrition
P35 - Fertilité du sol
Gossypium hirsutum
Gossypium barbadense
amélioration des plantes
physiologie de la nutrition
lignée
locus des caractères quantitatifs
héritabilité
feuille
carte génétique
phénotype
variation génétique
absorption de substances nutritives
substance nutritive
utilisation des nutriments
fertilité du sol
croissance
développement biologique
Vertisol
http://aims.fao.org/aos/agrovoc/c_3339
http://aims.fao.org/aos/agrovoc/c_3337
http://aims.fao.org/aos/agrovoc/c_5956
http://aims.fao.org/aos/agrovoc/c_5275
http://aims.fao.org/aos/agrovoc/c_29225
http://aims.fao.org/aos/agrovoc/c_37974
http://aims.fao.org/aos/agrovoc/c_3570
http://aims.fao.org/aos/agrovoc/c_4243
http://aims.fao.org/aos/agrovoc/c_24002
http://aims.fao.org/aos/agrovoc/c_5776
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_5273
http://aims.fao.org/aos/agrovoc/c_5274
http://aims.fao.org/aos/agrovoc/c_36245
http://aims.fao.org/aos/agrovoc/c_7170
http://aims.fao.org/aos/agrovoc/c_3394
http://aims.fao.org/aos/agrovoc/c_921
http://aims.fao.org/aos/agrovoc/c_8199
http://aims.fao.org/aos/agrovoc/c_714
F30 - Génétique et amélioration des plantes
F61 - Physiologie végétale - Nutrition
P35 - Fertilité du sol
Gossypium hirsutum
Gossypium barbadense
amélioration des plantes
physiologie de la nutrition
lignée
locus des caractères quantitatifs
héritabilité
feuille
carte génétique
phénotype
variation génétique
absorption de substances nutritives
substance nutritive
utilisation des nutriments
fertilité du sol
croissance
développement biologique
Vertisol
http://aims.fao.org/aos/agrovoc/c_3339
http://aims.fao.org/aos/agrovoc/c_3337
http://aims.fao.org/aos/agrovoc/c_5956
http://aims.fao.org/aos/agrovoc/c_5275
http://aims.fao.org/aos/agrovoc/c_29225
http://aims.fao.org/aos/agrovoc/c_37974
http://aims.fao.org/aos/agrovoc/c_3570
http://aims.fao.org/aos/agrovoc/c_4243
http://aims.fao.org/aos/agrovoc/c_24002
http://aims.fao.org/aos/agrovoc/c_5776
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_5273
http://aims.fao.org/aos/agrovoc/c_5274
http://aims.fao.org/aos/agrovoc/c_36245
http://aims.fao.org/aos/agrovoc/c_7170
http://aims.fao.org/aos/agrovoc/c_3394
http://aims.fao.org/aos/agrovoc/c_921
http://aims.fao.org/aos/agrovoc/c_8199
http://aims.fao.org/aos/agrovoc/c_714
Liu, Shiming
Lacape, Jean-Marc
Constable, Greg A.
Llewellyn, Danny
Inheritance and QTL mapping of leaf nutrient concentration in a cotton inter-specific derived RIL population
description Developing and deploying cotton cultivars with high nutrient uptake, use efficiency and tolerance to nutrient related soil stresses is desirable to assist sustainable soil management. Genetic variation, heritability, selection response and quantitative trait loci (QTLs) were investigated for five macronutrients (P, K, Ca, Mg, S) and five micronutrients (Fe, Mn, B, Zn, and Cu) in a recombinant inbred line (RIL) population from an inter-specific cross between Gossypium hirsutum cv. Guazuncho 2, and G. barbadense accession VH8-4602. Na and K/Na ratio were also studied as the imbalance between Na and other nutrients is detrimental to cotton growth and development. The concentrations of nutrients were measured for different plant parts of the two parents and for leaf samples of the whole population collected at early to peak flowering in field experiments over two years in a sodic Vertosol soil. Parental contrast was large for most nutrient concentrations in leaves when compared with other plant parts. Segregation for leaf nutrient concentration was observed within the population with transgression for P, K, K/Na ratio and all micronutrients. Genotypic difference was the major factor behind within-population variation for most nutrients, while narrow sense heritability was moderate (0.27 for Mn and Cu, and 0.43 for B). At least one significant QTL was identified for each nutrient except K and more than half of those QTLs were clustered on chromosomes 14, 18 and 22. Selection response was predicted to be low for P and all micronutrients except B, high for K, Na and B, and very high for K/Na ratio. Correlations were more common between macronutrients, Na and K/Na ratio where the nature and strength of the relations varied (r=-0.69 to 0.76). We conclude that there is sufficient genetic diversity between these two tetraploid cotton species that could be exploited to improve cotton nutrient status by introgressing species-unique favourable alleles.
format article
topic_facet F30 - Génétique et amélioration des plantes
F61 - Physiologie végétale - Nutrition
P35 - Fertilité du sol
Gossypium hirsutum
Gossypium barbadense
amélioration des plantes
physiologie de la nutrition
lignée
locus des caractères quantitatifs
héritabilité
feuille
carte génétique
phénotype
variation génétique
absorption de substances nutritives
substance nutritive
utilisation des nutriments
fertilité du sol
croissance
développement biologique
Vertisol
http://aims.fao.org/aos/agrovoc/c_3339
http://aims.fao.org/aos/agrovoc/c_3337
http://aims.fao.org/aos/agrovoc/c_5956
http://aims.fao.org/aos/agrovoc/c_5275
http://aims.fao.org/aos/agrovoc/c_29225
http://aims.fao.org/aos/agrovoc/c_37974
http://aims.fao.org/aos/agrovoc/c_3570
http://aims.fao.org/aos/agrovoc/c_4243
http://aims.fao.org/aos/agrovoc/c_24002
http://aims.fao.org/aos/agrovoc/c_5776
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_5273
http://aims.fao.org/aos/agrovoc/c_5274
http://aims.fao.org/aos/agrovoc/c_36245
http://aims.fao.org/aos/agrovoc/c_7170
http://aims.fao.org/aos/agrovoc/c_3394
http://aims.fao.org/aos/agrovoc/c_921
http://aims.fao.org/aos/agrovoc/c_8199
http://aims.fao.org/aos/agrovoc/c_714
author Liu, Shiming
Lacape, Jean-Marc
Constable, Greg A.
Llewellyn, Danny
author_facet Liu, Shiming
Lacape, Jean-Marc
Constable, Greg A.
Llewellyn, Danny
author_sort Liu, Shiming
title Inheritance and QTL mapping of leaf nutrient concentration in a cotton inter-specific derived RIL population
title_short Inheritance and QTL mapping of leaf nutrient concentration in a cotton inter-specific derived RIL population
title_full Inheritance and QTL mapping of leaf nutrient concentration in a cotton inter-specific derived RIL population
title_fullStr Inheritance and QTL mapping of leaf nutrient concentration in a cotton inter-specific derived RIL population
title_full_unstemmed Inheritance and QTL mapping of leaf nutrient concentration in a cotton inter-specific derived RIL population
title_sort inheritance and qtl mapping of leaf nutrient concentration in a cotton inter-specific derived ril population
url http://agritrop.cirad.fr/576072/
http://agritrop.cirad.fr/576072/1/576072.pdf
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spelling dig-cirad-fr-5760722024-01-28T22:41:47Z http://agritrop.cirad.fr/576072/ http://agritrop.cirad.fr/576072/ Inheritance and QTL mapping of leaf nutrient concentration in a cotton inter-specific derived RIL population. Liu Shiming, Lacape Jean-Marc, Constable Greg A., Llewellyn Danny. 2015. PloS One, 10 (5):e0128100, 19 p.https://doi.org/10.1371/journal.pone.0128100 <https://doi.org/10.1371/journal.pone.0128100> Inheritance and QTL mapping of leaf nutrient concentration in a cotton inter-specific derived RIL population Liu, Shiming Lacape, Jean-Marc Constable, Greg A. Llewellyn, Danny eng 2015 PloS One F30 - Génétique et amélioration des plantes F61 - Physiologie végétale - Nutrition P35 - Fertilité du sol Gossypium hirsutum Gossypium barbadense amélioration des plantes physiologie de la nutrition lignée locus des caractères quantitatifs héritabilité feuille carte génétique phénotype variation génétique absorption de substances nutritives substance nutritive utilisation des nutriments fertilité du sol croissance développement biologique Vertisol http://aims.fao.org/aos/agrovoc/c_3339 http://aims.fao.org/aos/agrovoc/c_3337 http://aims.fao.org/aos/agrovoc/c_5956 http://aims.fao.org/aos/agrovoc/c_5275 http://aims.fao.org/aos/agrovoc/c_29225 http://aims.fao.org/aos/agrovoc/c_37974 http://aims.fao.org/aos/agrovoc/c_3570 http://aims.fao.org/aos/agrovoc/c_4243 http://aims.fao.org/aos/agrovoc/c_24002 http://aims.fao.org/aos/agrovoc/c_5776 http://aims.fao.org/aos/agrovoc/c_15975 http://aims.fao.org/aos/agrovoc/c_5273 http://aims.fao.org/aos/agrovoc/c_5274 http://aims.fao.org/aos/agrovoc/c_36245 http://aims.fao.org/aos/agrovoc/c_7170 http://aims.fao.org/aos/agrovoc/c_3394 http://aims.fao.org/aos/agrovoc/c_921 http://aims.fao.org/aos/agrovoc/c_8199 Australie http://aims.fao.org/aos/agrovoc/c_714 Developing and deploying cotton cultivars with high nutrient uptake, use efficiency and tolerance to nutrient related soil stresses is desirable to assist sustainable soil management. Genetic variation, heritability, selection response and quantitative trait loci (QTLs) were investigated for five macronutrients (P, K, Ca, Mg, S) and five micronutrients (Fe, Mn, B, Zn, and Cu) in a recombinant inbred line (RIL) population from an inter-specific cross between Gossypium hirsutum cv. Guazuncho 2, and G. barbadense accession VH8-4602. Na and K/Na ratio were also studied as the imbalance between Na and other nutrients is detrimental to cotton growth and development. The concentrations of nutrients were measured for different plant parts of the two parents and for leaf samples of the whole population collected at early to peak flowering in field experiments over two years in a sodic Vertosol soil. Parental contrast was large for most nutrient concentrations in leaves when compared with other plant parts. Segregation for leaf nutrient concentration was observed within the population with transgression for P, K, K/Na ratio and all micronutrients. Genotypic difference was the major factor behind within-population variation for most nutrients, while narrow sense heritability was moderate (0.27 for Mn and Cu, and 0.43 for B). At least one significant QTL was identified for each nutrient except K and more than half of those QTLs were clustered on chromosomes 14, 18 and 22. Selection response was predicted to be low for P and all micronutrients except B, high for K, Na and B, and very high for K/Na ratio. Correlations were more common between macronutrients, Na and K/Na ratio where the nature and strength of the relations varied (r=-0.69 to 0.76). We conclude that there is sufficient genetic diversity between these two tetraploid cotton species that could be exploited to improve cotton nutrient status by introgressing species-unique favourable alleles. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/576072/1/576072.pdf text cc_by info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/ https://doi.org/10.1371/journal.pone.0128100 10.1371/journal.pone.0128100 info:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pone.0128100 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1371/journal.pone.0128100