International Consortium of Rice Mutagenesis: Resources and beyond

Rice is one of the most important crops in the world. The rice community needs to cooperate and share efforts and resources so that we can understand the functions of rice genes, especially those with a role in important agronomical traits, for application in agricultural production. Mutation is a major source of genetic variation that can be used for studying gene function. We will present here the status of mutant collections affected in a random manner by physical/chemical and insertion mutageneses. As of early September 2013, a total of 447, 919 flanking sequence tags from rice mutant libraries with T-DNA, Ac/Ds, En/Spm, Tos17, nDART/aDART insertions have been collected and publicly available. From these, 336,262 sequences are precisely positioned on the japonica rice chromosomes, and 67.5% are in gene interval. We discuss the genome coverage and preference of the insertion, issues limiting the exchange and use of the current collections, as well as new and improved resources. We propose a call to renew all mutant populations as soon as possible. We also suggest that a common web portal should be established for ordering seeds.

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Main Authors: Wei, Fu-Jin, Droc, Gaëtan, Guiderdoni, Emmanuel, Hsing, Yue-ie C.
Format: article biblioteca
Language:eng
Subjects:F30 - Génétique et amélioration des plantes, Oryza sativa, mutation, mutant, collection de matériel génétique, http://aims.fao.org/aos/agrovoc/c_5438, http://aims.fao.org/aos/agrovoc/c_5014, http://aims.fao.org/aos/agrovoc/c_5013, http://aims.fao.org/aos/agrovoc/c_36739,
Online Access:http://agritrop.cirad.fr/575923/
http://agritrop.cirad.fr/575923/1/document_575923.pdf
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spelling dig-cirad-fr-5759232024-01-28T22:39:49Z http://agritrop.cirad.fr/575923/ http://agritrop.cirad.fr/575923/ International Consortium of Rice Mutagenesis: Resources and beyond. Wei Fu-Jin, Droc Gaëtan, Guiderdoni Emmanuel, Hsing Yue-ie C.. 2013. Rice, 6 (39), 11 p.https://doi.org/10.1186/1939-8433-6-39 <https://doi.org/10.1186/1939-8433-6-39> International Consortium of Rice Mutagenesis: Resources and beyond Wei, Fu-Jin Droc, Gaëtan Guiderdoni, Emmanuel Hsing, Yue-ie C. eng 2013 Rice F30 - Génétique et amélioration des plantes Oryza sativa mutation mutant collection de matériel génétique http://aims.fao.org/aos/agrovoc/c_5438 http://aims.fao.org/aos/agrovoc/c_5014 http://aims.fao.org/aos/agrovoc/c_5013 http://aims.fao.org/aos/agrovoc/c_36739 Rice is one of the most important crops in the world. The rice community needs to cooperate and share efforts and resources so that we can understand the functions of rice genes, especially those with a role in important agronomical traits, for application in agricultural production. Mutation is a major source of genetic variation that can be used for studying gene function. We will present here the status of mutant collections affected in a random manner by physical/chemical and insertion mutageneses. As of early September 2013, a total of 447, 919 flanking sequence tags from rice mutant libraries with T-DNA, Ac/Ds, En/Spm, Tos17, nDART/aDART insertions have been collected and publicly available. From these, 336,262 sequences are precisely positioned on the japonica rice chromosomes, and 67.5% are in gene interval. We discuss the genome coverage and preference of the insertion, issues limiting the exchange and use of the current collections, as well as new and improved resources. We propose a call to renew all mutant populations as soon as possible. We also suggest that a common web portal should be established for ordering seeds. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/575923/1/document_575923.pdf application/pdf Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1186/1939-8433-6-39 10.1186/1939-8433-6-39 info:eu-repo/semantics/altIdentifier/doi/10.1186/1939-8433-6-39 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1186/1939-8433-6-39
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
Oryza sativa
mutation
mutant
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_5438
http://aims.fao.org/aos/agrovoc/c_5014
http://aims.fao.org/aos/agrovoc/c_5013
http://aims.fao.org/aos/agrovoc/c_36739
F30 - Génétique et amélioration des plantes
Oryza sativa
mutation
mutant
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_5438
http://aims.fao.org/aos/agrovoc/c_5014
http://aims.fao.org/aos/agrovoc/c_5013
http://aims.fao.org/aos/agrovoc/c_36739
spellingShingle F30 - Génétique et amélioration des plantes
Oryza sativa
mutation
mutant
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_5438
http://aims.fao.org/aos/agrovoc/c_5014
http://aims.fao.org/aos/agrovoc/c_5013
http://aims.fao.org/aos/agrovoc/c_36739
F30 - Génétique et amélioration des plantes
Oryza sativa
mutation
mutant
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_5438
http://aims.fao.org/aos/agrovoc/c_5014
http://aims.fao.org/aos/agrovoc/c_5013
http://aims.fao.org/aos/agrovoc/c_36739
Wei, Fu-Jin
Droc, Gaëtan
Guiderdoni, Emmanuel
Hsing, Yue-ie C.
International Consortium of Rice Mutagenesis: Resources and beyond
description Rice is one of the most important crops in the world. The rice community needs to cooperate and share efforts and resources so that we can understand the functions of rice genes, especially those with a role in important agronomical traits, for application in agricultural production. Mutation is a major source of genetic variation that can be used for studying gene function. We will present here the status of mutant collections affected in a random manner by physical/chemical and insertion mutageneses. As of early September 2013, a total of 447, 919 flanking sequence tags from rice mutant libraries with T-DNA, Ac/Ds, En/Spm, Tos17, nDART/aDART insertions have been collected and publicly available. From these, 336,262 sequences are precisely positioned on the japonica rice chromosomes, and 67.5% are in gene interval. We discuss the genome coverage and preference of the insertion, issues limiting the exchange and use of the current collections, as well as new and improved resources. We propose a call to renew all mutant populations as soon as possible. We also suggest that a common web portal should be established for ordering seeds.
format article
topic_facet F30 - Génétique et amélioration des plantes
Oryza sativa
mutation
mutant
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_5438
http://aims.fao.org/aos/agrovoc/c_5014
http://aims.fao.org/aos/agrovoc/c_5013
http://aims.fao.org/aos/agrovoc/c_36739
author Wei, Fu-Jin
Droc, Gaëtan
Guiderdoni, Emmanuel
Hsing, Yue-ie C.
author_facet Wei, Fu-Jin
Droc, Gaëtan
Guiderdoni, Emmanuel
Hsing, Yue-ie C.
author_sort Wei, Fu-Jin
title International Consortium of Rice Mutagenesis: Resources and beyond
title_short International Consortium of Rice Mutagenesis: Resources and beyond
title_full International Consortium of Rice Mutagenesis: Resources and beyond
title_fullStr International Consortium of Rice Mutagenesis: Resources and beyond
title_full_unstemmed International Consortium of Rice Mutagenesis: Resources and beyond
title_sort international consortium of rice mutagenesis: resources and beyond
url http://agritrop.cirad.fr/575923/
http://agritrop.cirad.fr/575923/1/document_575923.pdf
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AT drocgaetan internationalconsortiumofricemutagenesisresourcesandbeyond
AT guiderdoniemmanuel internationalconsortiumofricemutagenesisresourcesandbeyond
AT hsingyueiec internationalconsortiumofricemutagenesisresourcesandbeyond
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