Genome sequence comparisons reveal interspecific hybridizations and admixture in citrus domestication : [W317]

Citrus is the most globally significant tree fruit, but its history of domestication is not well understood. Cultivated citrus types are believed to be direct selections from, or hybrids of, several progenitor species; however, the identities of these species and their contributions to modern cultivars remain unclear and controversial. A collection of different genomes of mandarins, pummelos, and oranges, including a high quality reference sequence from a haploid Clementine mandarin, has been assembled. By comparative analyses we show that these cultivated types were derived from two progenitor species, C. maxima and C. reticulata. Although it was determined that the sequenced cultivated pummelos represent selections from C. maxima, the cultivated mandarins proved to be introgressions of C. maxima into a distinct second population identified as the ancestral wild mandarin species, C. reticulata. Sweet and sour oranges were found to be hybrids between these two species. Sweet orange, the most widely cultivated citrus, arose as the offspring of previously admixed individuals. Sour (or Seville) orange was found to be an F1 hybrid of pure C. maximaand C. reticulata parents, indicating that wild mandarins were at least a part of the early breeding germplasm. Sequence analysis also revealed that at least one Chinese "wild mandarin" actually represents a citrus species distinct from C. reticulata, suggesting the possibility that other unrecognized wild citrus species may be identified. Understanding the phylogeny of cultivated citrus by comparative genome analysis will clarify taxonomic relationships and potentially lead to previously inconceivable opportunities for genetic improvement. (Texte intégral)

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Main Authors: Gmitter, Frederick G. Jr., Wu, Guohong Albert, Prochnik, Simon, Ollitrault, Patrick, Talon, Manuel, Machado, Marcos Antonio, Morgante, Michele, Jaillon, Olivier, Rokhsar, Daniel S.
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Language:eng
Published: s.n.
Subjects:F30 - Génétique et amélioration des plantes, F70 - Taxonomie végétale et phytogéographie,
Online Access:http://agritrop.cirad.fr/573272/
http://agritrop.cirad.fr/573272/1/document_573272.pdf
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spelling dig-cirad-fr-5732722020-12-15T17:10:43Z http://agritrop.cirad.fr/573272/ http://agritrop.cirad.fr/573272/ Genome sequence comparisons reveal interspecific hybridizations and admixture in citrus domestication : [W317]. Gmitter Frederick G. Jr., Wu Guohong Albert, Prochnik Simon, Ollitrault Patrick, Talon Manuel, Machado Marcos Antonio, Morgante Michele, Jaillon Olivier, Rokhsar Daniel S.. 2014. In : Plant and Animal Genomes Conference XXII Conference, San diego, United States, San Diego, United States, January 11-15, 2014. s.l. : s.n., Résumé Plant and Animal Genome Conference. 22, San Diego, États-Unis, 11 Janvier 2014/15 Janvier 2014.https://pag.confex.com/pag/xxii/webprogram/Paper9396.html <https://pag.confex.com/pag/xxii/webprogram/Paper9396.html> Researchers Genome sequence comparisons reveal interspecific hybridizations and admixture in citrus domestication : [W317] Gmitter, Frederick G. Jr. Wu, Guohong Albert Prochnik, Simon Ollitrault, Patrick Talon, Manuel Machado, Marcos Antonio Morgante, Michele Jaillon, Olivier Rokhsar, Daniel S. eng 2014 s.n. Plant and Animal Genomes Conference XXII Conference, San diego, United States, San Diego, United States, January 11-15, 2014 F30 - Génétique et amélioration des plantes F70 - Taxonomie végétale et phytogéographie Citrus is the most globally significant tree fruit, but its history of domestication is not well understood. Cultivated citrus types are believed to be direct selections from, or hybrids of, several progenitor species; however, the identities of these species and their contributions to modern cultivars remain unclear and controversial. A collection of different genomes of mandarins, pummelos, and oranges, including a high quality reference sequence from a haploid Clementine mandarin, has been assembled. By comparative analyses we show that these cultivated types were derived from two progenitor species, C. maxima and C. reticulata. Although it was determined that the sequenced cultivated pummelos represent selections from C. maxima, the cultivated mandarins proved to be introgressions of C. maxima into a distinct second population identified as the ancestral wild mandarin species, C. reticulata. Sweet and sour oranges were found to be hybrids between these two species. Sweet orange, the most widely cultivated citrus, arose as the offspring of previously admixed individuals. Sour (or Seville) orange was found to be an F1 hybrid of pure C. maximaand C. reticulata parents, indicating that wild mandarins were at least a part of the early breeding germplasm. Sequence analysis also revealed that at least one Chinese "wild mandarin" actually represents a citrus species distinct from C. reticulata, suggesting the possibility that other unrecognized wild citrus species may be identified. Understanding the phylogeny of cultivated citrus by comparative genome analysis will clarify taxonomic relationships and potentially lead to previously inconceivable opportunities for genetic improvement. (Texte intégral) conference_item info:eu-repo/semantics/conferenceObject Conference info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/573272/1/document_573272.pdf application/pdf Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://pag.confex.com/pag/xxii/webprogram/Paper9396.html info:eu-repo/semantics/altIdentifier/purl/https://pag.confex.com/pag/xxii/webprogram/Paper9396.html
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
F70 - Taxonomie végétale et phytogéographie
F30 - Génétique et amélioration des plantes
F70 - Taxonomie végétale et phytogéographie
spellingShingle F30 - Génétique et amélioration des plantes
F70 - Taxonomie végétale et phytogéographie
F30 - Génétique et amélioration des plantes
F70 - Taxonomie végétale et phytogéographie
Gmitter, Frederick G. Jr.
Wu, Guohong Albert
Prochnik, Simon
Ollitrault, Patrick
Talon, Manuel
Machado, Marcos Antonio
Morgante, Michele
Jaillon, Olivier
Rokhsar, Daniel S.
Genome sequence comparisons reveal interspecific hybridizations and admixture in citrus domestication : [W317]
description Citrus is the most globally significant tree fruit, but its history of domestication is not well understood. Cultivated citrus types are believed to be direct selections from, or hybrids of, several progenitor species; however, the identities of these species and their contributions to modern cultivars remain unclear and controversial. A collection of different genomes of mandarins, pummelos, and oranges, including a high quality reference sequence from a haploid Clementine mandarin, has been assembled. By comparative analyses we show that these cultivated types were derived from two progenitor species, C. maxima and C. reticulata. Although it was determined that the sequenced cultivated pummelos represent selections from C. maxima, the cultivated mandarins proved to be introgressions of C. maxima into a distinct second population identified as the ancestral wild mandarin species, C. reticulata. Sweet and sour oranges were found to be hybrids between these two species. Sweet orange, the most widely cultivated citrus, arose as the offspring of previously admixed individuals. Sour (or Seville) orange was found to be an F1 hybrid of pure C. maximaand C. reticulata parents, indicating that wild mandarins were at least a part of the early breeding germplasm. Sequence analysis also revealed that at least one Chinese "wild mandarin" actually represents a citrus species distinct from C. reticulata, suggesting the possibility that other unrecognized wild citrus species may be identified. Understanding the phylogeny of cultivated citrus by comparative genome analysis will clarify taxonomic relationships and potentially lead to previously inconceivable opportunities for genetic improvement. (Texte intégral)
format conference_item
topic_facet F30 - Génétique et amélioration des plantes
F70 - Taxonomie végétale et phytogéographie
author Gmitter, Frederick G. Jr.
Wu, Guohong Albert
Prochnik, Simon
Ollitrault, Patrick
Talon, Manuel
Machado, Marcos Antonio
Morgante, Michele
Jaillon, Olivier
Rokhsar, Daniel S.
author_facet Gmitter, Frederick G. Jr.
Wu, Guohong Albert
Prochnik, Simon
Ollitrault, Patrick
Talon, Manuel
Machado, Marcos Antonio
Morgante, Michele
Jaillon, Olivier
Rokhsar, Daniel S.
author_sort Gmitter, Frederick G. Jr.
title Genome sequence comparisons reveal interspecific hybridizations and admixture in citrus domestication : [W317]
title_short Genome sequence comparisons reveal interspecific hybridizations and admixture in citrus domestication : [W317]
title_full Genome sequence comparisons reveal interspecific hybridizations and admixture in citrus domestication : [W317]
title_fullStr Genome sequence comparisons reveal interspecific hybridizations and admixture in citrus domestication : [W317]
title_full_unstemmed Genome sequence comparisons reveal interspecific hybridizations and admixture in citrus domestication : [W317]
title_sort genome sequence comparisons reveal interspecific hybridizations and admixture in citrus domestication : [w317]
publisher s.n.
url http://agritrop.cirad.fr/573272/
http://agritrop.cirad.fr/573272/1/document_573272.pdf
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