Identification and analysis of polymorphisms in the promoter region of the gene DREB1A from contrasting haplotypes of Coffea canephora
The aim of the present study was to identify and analyze the polymorphisms within the promoter region of the gene DREB1A in two clones of C. canephora, clones 14 (drought tolerant) and 22 (drought susceptible), but also in other accessions of Coffea genus (C. eugenioides and C. arabica). This allowed the identification of cis-regulatory elements and also of polymorphisms in the promoter region of the gene DREB1A. For example, the presence of cis-regulatory elements from transcription factors belonging to ABA-dependent pathway suggested the possibility of cross-talk between the two networks (ABA-independent and -dependent) response upon the regulation process of the DREB1A gene. The polymorphisms permitted the identification of different haplotypes among those genotypes and the allelic distribution of these loci. These polymorphisms may indicate the involvement of different haplotypes in the genetic control of drought tolerance.
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dig-cirad-fr-5694022023-03-24T13:48:25Z http://agritrop.cirad.fr/569402/ http://agritrop.cirad.fr/569402/ Identification and analysis of polymorphisms in the promoter region of the gene DREB1A from contrasting haplotypes of Coffea canephora. Alves Gabriel Sergio Costa, Freire Luciana Pereira, Vieira Natalia Gomes, Marraccini Pierre, Paiva L.V., Andrade Alan Carvalho. 2013. In : Proceedings of the 24th International Conference on Coffee Science, San José, Costa Rica, 12th-16th November 2012 = Actes du 24ème Colloque scientifique international sur le café, San José, Costa Rica, 12-16 novembre 2012. ASIC. Paris : ASIC, 1424-1428. ISBN 978-2-900212-23-3 International Conference on Coffee Science. 24, San José, Costa Rica, 12 Novembre 2012/16 Novembre 2012. Researchers Identification and analysis of polymorphisms in the promoter region of the gene DREB1A from contrasting haplotypes of Coffea canephora Alves, Gabriel Sergio Costa Freire, Luciana Pereira Vieira, Natalia Gomes Marraccini, Pierre Paiva, L.V. Andrade, Alan Carvalho eng 2013 ASIC Proceedings of the 24th International Conference on Coffee Science, San José, Costa Rica, 12th-16th November 2012 F30 - Génétique et amélioration des plantes H50 - Troubles divers des plantes F60 - Physiologie et biochimie végétale The aim of the present study was to identify and analyze the polymorphisms within the promoter region of the gene DREB1A in two clones of C. canephora, clones 14 (drought tolerant) and 22 (drought susceptible), but also in other accessions of Coffea genus (C. eugenioides and C. arabica). This allowed the identification of cis-regulatory elements and also of polymorphisms in the promoter region of the gene DREB1A. For example, the presence of cis-regulatory elements from transcription factors belonging to ABA-dependent pathway suggested the possibility of cross-talk between the two networks (ABA-independent and -dependent) response upon the regulation process of the DREB1A gene. The polymorphisms permitted the identification of different haplotypes among those genotypes and the allelic distribution of these loci. These polymorphisms may indicate the involvement of different haplotypes in the genetic control of drought tolerance. conference_item info:eu-repo/semantics/conferenceObject Conference info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/569402/1/document_569402.pdf application/pdf Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html http://catalogue-bibliotheques.cirad.fr/cgi-bin/koha/opac-detail.pl?biblionumber=216628 |
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F30 - Génétique et amélioration des plantes H50 - Troubles divers des plantes F60 - Physiologie et biochimie végétale F30 - Génétique et amélioration des plantes H50 - Troubles divers des plantes F60 - Physiologie et biochimie végétale |
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F30 - Génétique et amélioration des plantes H50 - Troubles divers des plantes F60 - Physiologie et biochimie végétale F30 - Génétique et amélioration des plantes H50 - Troubles divers des plantes F60 - Physiologie et biochimie végétale Alves, Gabriel Sergio Costa Freire, Luciana Pereira Vieira, Natalia Gomes Marraccini, Pierre Paiva, L.V. Andrade, Alan Carvalho Identification and analysis of polymorphisms in the promoter region of the gene DREB1A from contrasting haplotypes of Coffea canephora |
description |
The aim of the present study was to identify and analyze the polymorphisms within the promoter region of the gene DREB1A in two clones of C. canephora, clones 14 (drought tolerant) and 22 (drought susceptible), but also in other accessions of Coffea genus (C. eugenioides and C. arabica). This allowed the identification of cis-regulatory elements and also of polymorphisms in the promoter region of the gene DREB1A. For example, the presence of cis-regulatory elements from transcription factors belonging to ABA-dependent pathway suggested the possibility of cross-talk between the two networks (ABA-independent and -dependent) response upon the regulation process of the DREB1A gene. The polymorphisms permitted the identification of different haplotypes among those genotypes and the allelic distribution of these loci. These polymorphisms may indicate the involvement of different haplotypes in the genetic control of drought tolerance. |
format |
conference_item |
topic_facet |
F30 - Génétique et amélioration des plantes H50 - Troubles divers des plantes F60 - Physiologie et biochimie végétale |
author |
Alves, Gabriel Sergio Costa Freire, Luciana Pereira Vieira, Natalia Gomes Marraccini, Pierre Paiva, L.V. Andrade, Alan Carvalho |
author_facet |
Alves, Gabriel Sergio Costa Freire, Luciana Pereira Vieira, Natalia Gomes Marraccini, Pierre Paiva, L.V. Andrade, Alan Carvalho |
author_sort |
Alves, Gabriel Sergio Costa |
title |
Identification and analysis of polymorphisms in the promoter region of the gene DREB1A from contrasting haplotypes of Coffea canephora |
title_short |
Identification and analysis of polymorphisms in the promoter region of the gene DREB1A from contrasting haplotypes of Coffea canephora |
title_full |
Identification and analysis of polymorphisms in the promoter region of the gene DREB1A from contrasting haplotypes of Coffea canephora |
title_fullStr |
Identification and analysis of polymorphisms in the promoter region of the gene DREB1A from contrasting haplotypes of Coffea canephora |
title_full_unstemmed |
Identification and analysis of polymorphisms in the promoter region of the gene DREB1A from contrasting haplotypes of Coffea canephora |
title_sort |
identification and analysis of polymorphisms in the promoter region of the gene dreb1a from contrasting haplotypes of coffea canephora |
publisher |
ASIC |
url |
http://agritrop.cirad.fr/569402/ http://agritrop.cirad.fr/569402/1/document_569402.pdf |
work_keys_str_mv |
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1762943287195336704 |