Natural genetic variation of Xanthomonas campestris pv. campestris pathogenicity on Arabidopsis revealed by association and reverse genetics

The pathogenic bacterium Xanthomonas campestris pv. campestris, the causal agent of black rot of Brassicaceae, manipulates the physiology and the innate immunity of its hosts. Association genetic and reverse-genetic analyses of a world panel of 45 X. campestris pv. campestris strains were used to gain understanding of the genetic basis of the bacterium's pathogenicity to Arabidopsis thaliana. We found that the compositions of the minimal predicted type III secretome varied extensively, with 18 to 28 proteins per strain. There were clear differences in aggressiveness of those X. campestris pv. campestris strains on two Arabidopsis natural accessions. We identified 3 effector genes (xopAC, xopJ5, and xopAL2) and 67 amplified fragment length polymorphism (AFLP) markers that were associated with variations in disease symptoms. The nature and distribution of the AFLP markers remain to be determined, but we observed a low linkage disequilibrium level between predicted effectors and other significant markers, suggesting that additional genetic factors make a meaningful contribution to pathogenicity. Mutagenesis of type III effectors in X. campestris pv. campestris confirmed that xopAC functions as both a virulence and an avirulence gene in Arabidopsis and that xopAM functions as a second avirulence gene on plants of the Col-0 ecotype. However, we did not detect the effect of any other effector in the X. campestris pv. campestris 8004 strain, likely due to other genetic background effects. These results highlight the complex genetic basis of pathogenicity at the pathovar level and encourage us to challenge the agronomical relevance of some virulence determinants identified solely in model strains.

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Main Authors: Guy, Endrick, Genissel, Anne, Hajri, Ahmed, Chabannes, Matthieu, David, Perrine, Carrère, Sébastien, Lautier, Martine, Roux, Brice, Boureau, Tristan, Arlat, Mathieu, Poussier, Stéphane, Noel, Laurent D.
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Language:eng
Subjects:H20 - Maladies des plantes,
Online Access:http://agritrop.cirad.fr/569328/
http://agritrop.cirad.fr/569328/1/document_569328.pdf
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spelling dig-cirad-fr-5693282022-03-30T14:51:39Z http://agritrop.cirad.fr/569328/ http://agritrop.cirad.fr/569328/ Natural genetic variation of Xanthomonas campestris pv. campestris pathogenicity on Arabidopsis revealed by association and reverse genetics. Guy Endrick, Genissel Anne, Hajri Ahmed, Chabannes Matthieu, David Perrine, Carrère Sébastien, Lautier Martine, Roux Brice, Boureau Tristan, Arlat Mathieu, Poussier Stéphane, Noel Laurent D.. 2013. Mbio, 4 (3) : 00538-12.https://doi.org/10.1128/mBio.00538-12 <https://doi.org/10.1128/mBio.00538-12> Researchers Natural genetic variation of Xanthomonas campestris pv. campestris pathogenicity on Arabidopsis revealed by association and reverse genetics Guy, Endrick Genissel, Anne Hajri, Ahmed Chabannes, Matthieu David, Perrine Carrère, Sébastien Lautier, Martine Roux, Brice Boureau, Tristan Arlat, Mathieu Poussier, Stéphane Noel, Laurent D. eng 2013 Mbio H20 - Maladies des plantes The pathogenic bacterium Xanthomonas campestris pv. campestris, the causal agent of black rot of Brassicaceae, manipulates the physiology and the innate immunity of its hosts. Association genetic and reverse-genetic analyses of a world panel of 45 X. campestris pv. campestris strains were used to gain understanding of the genetic basis of the bacterium's pathogenicity to Arabidopsis thaliana. We found that the compositions of the minimal predicted type III secretome varied extensively, with 18 to 28 proteins per strain. There were clear differences in aggressiveness of those X. campestris pv. campestris strains on two Arabidopsis natural accessions. We identified 3 effector genes (xopAC, xopJ5, and xopAL2) and 67 amplified fragment length polymorphism (AFLP) markers that were associated with variations in disease symptoms. The nature and distribution of the AFLP markers remain to be determined, but we observed a low linkage disequilibrium level between predicted effectors and other significant markers, suggesting that additional genetic factors make a meaningful contribution to pathogenicity. Mutagenesis of type III effectors in X. campestris pv. campestris confirmed that xopAC functions as both a virulence and an avirulence gene in Arabidopsis and that xopAM functions as a second avirulence gene on plants of the Col-0 ecotype. However, we did not detect the effect of any other effector in the X. campestris pv. campestris 8004 strain, likely due to other genetic background effects. These results highlight the complex genetic basis of pathogenicity at the pathovar level and encourage us to challenge the agronomical relevance of some virulence determinants identified solely in model strains. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/569328/1/document_569328.pdf application/pdf Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1128/mBio.00538-12 10.1128/mBio.00538-12 info:eu-repo/semantics/altIdentifier/doi/10.1128/mBio.00538-12 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1128/mBio.00538-12
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic H20 - Maladies des plantes
H20 - Maladies des plantes
spellingShingle H20 - Maladies des plantes
H20 - Maladies des plantes
Guy, Endrick
Genissel, Anne
Hajri, Ahmed
Chabannes, Matthieu
David, Perrine
Carrère, Sébastien
Lautier, Martine
Roux, Brice
Boureau, Tristan
Arlat, Mathieu
Poussier, Stéphane
Noel, Laurent D.
Natural genetic variation of Xanthomonas campestris pv. campestris pathogenicity on Arabidopsis revealed by association and reverse genetics
description The pathogenic bacterium Xanthomonas campestris pv. campestris, the causal agent of black rot of Brassicaceae, manipulates the physiology and the innate immunity of its hosts. Association genetic and reverse-genetic analyses of a world panel of 45 X. campestris pv. campestris strains were used to gain understanding of the genetic basis of the bacterium's pathogenicity to Arabidopsis thaliana. We found that the compositions of the minimal predicted type III secretome varied extensively, with 18 to 28 proteins per strain. There were clear differences in aggressiveness of those X. campestris pv. campestris strains on two Arabidopsis natural accessions. We identified 3 effector genes (xopAC, xopJ5, and xopAL2) and 67 amplified fragment length polymorphism (AFLP) markers that were associated with variations in disease symptoms. The nature and distribution of the AFLP markers remain to be determined, but we observed a low linkage disequilibrium level between predicted effectors and other significant markers, suggesting that additional genetic factors make a meaningful contribution to pathogenicity. Mutagenesis of type III effectors in X. campestris pv. campestris confirmed that xopAC functions as both a virulence and an avirulence gene in Arabidopsis and that xopAM functions as a second avirulence gene on plants of the Col-0 ecotype. However, we did not detect the effect of any other effector in the X. campestris pv. campestris 8004 strain, likely due to other genetic background effects. These results highlight the complex genetic basis of pathogenicity at the pathovar level and encourage us to challenge the agronomical relevance of some virulence determinants identified solely in model strains.
format article
topic_facet H20 - Maladies des plantes
author Guy, Endrick
Genissel, Anne
Hajri, Ahmed
Chabannes, Matthieu
David, Perrine
Carrère, Sébastien
Lautier, Martine
Roux, Brice
Boureau, Tristan
Arlat, Mathieu
Poussier, Stéphane
Noel, Laurent D.
author_facet Guy, Endrick
Genissel, Anne
Hajri, Ahmed
Chabannes, Matthieu
David, Perrine
Carrère, Sébastien
Lautier, Martine
Roux, Brice
Boureau, Tristan
Arlat, Mathieu
Poussier, Stéphane
Noel, Laurent D.
author_sort Guy, Endrick
title Natural genetic variation of Xanthomonas campestris pv. campestris pathogenicity on Arabidopsis revealed by association and reverse genetics
title_short Natural genetic variation of Xanthomonas campestris pv. campestris pathogenicity on Arabidopsis revealed by association and reverse genetics
title_full Natural genetic variation of Xanthomonas campestris pv. campestris pathogenicity on Arabidopsis revealed by association and reverse genetics
title_fullStr Natural genetic variation of Xanthomonas campestris pv. campestris pathogenicity on Arabidopsis revealed by association and reverse genetics
title_full_unstemmed Natural genetic variation of Xanthomonas campestris pv. campestris pathogenicity on Arabidopsis revealed by association and reverse genetics
title_sort natural genetic variation of xanthomonas campestris pv. campestris pathogenicity on arabidopsis revealed by association and reverse genetics
url http://agritrop.cirad.fr/569328/
http://agritrop.cirad.fr/569328/1/document_569328.pdf
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