Isolation and characterization of new polymorphic microsatellite markers for the tick Ixodes ricinus (Acari, Ixodidae)

Nine microsatellite markers were isolated from unfed larvae of Ixodes ricinus and were tested on two populations of nymphs collected on roe deer (N=21) and birds (N=39) in a French suburban forest. All markers were polymorphic, with limited evidence for deviations from linkage equilibrium. In accordance with previous markers developed for this species, we found large heterozygote deficits for six of the nine loci. Deficits were of the same order of magnitude within a tick infrapopulation, suggesting that population-level estimates were not due to a Wahlund effect among individual hosts, but more likely to technical problems (i.e., null alleles due to mutations in the flanking regions of the microsatellites). Although micro-geographic substructure (e.g., homogamy within infrapopulations) can not be ruled out, it is possible that null alleles could be an inherent problem associated with this tick species and specific genome-level studies are called for. Despite the possible presence of null alleles, the precision of population genetic estimates was improved by the addition of the newly-developed markers making them a useful addition for studying the population ecology of I. ricinus.

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Main Authors: Noel, Valérie, Leger, Elsa, Gómez-Díaz, Elena, Risterucci, Ange-Marie, McCoy, Karen D.
Format: article biblioteca
Language:eng
Subjects:L72 - Organismes nuisibles des animaux, L73 - Maladies des animaux, Ixodes ricinus, microsatellite, marqueur génétique, polymorphisme génétique, parasite, génétique des populations, maladie transmissible par tiques, chevreuil, oiseau, http://aims.fao.org/aos/agrovoc/c_30962, http://aims.fao.org/aos/agrovoc/c_36574, http://aims.fao.org/aos/agrovoc/c_24030, http://aims.fao.org/aos/agrovoc/c_24031, http://aims.fao.org/aos/agrovoc/c_5574, http://aims.fao.org/aos/agrovoc/c_34326, http://aims.fao.org/aos/agrovoc/c_24908, http://aims.fao.org/aos/agrovoc/c_24107, http://aims.fao.org/aos/agrovoc/c_935, http://aims.fao.org/aos/agrovoc/c_3081,
Online Access:http://agritrop.cirad.fr/565867/
http://agritrop.cirad.fr/565867/1/document_565867.pdf
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spelling dig-cirad-fr-5658672024-01-28T20:46:50Z http://agritrop.cirad.fr/565867/ http://agritrop.cirad.fr/565867/ Isolation and characterization of new polymorphic microsatellite markers for the tick Ixodes ricinus (Acari, Ixodidae). Noel Valérie, Leger Elsa, Gómez-Díaz Elena, Risterucci Ange-Marie, McCoy Karen D.. 2012. Acarologia, 52 (2) : 123-128.https://doi.org/10.1051/acarologia/20122041 <https://doi.org/10.1051/acarologia/20122041> Isolation and characterization of new polymorphic microsatellite markers for the tick Ixodes ricinus (Acari, Ixodidae) Noel, Valérie Leger, Elsa Gómez-Díaz, Elena Risterucci, Ange-Marie McCoy, Karen D. eng 2012 Acarologia L72 - Organismes nuisibles des animaux L73 - Maladies des animaux Ixodes ricinus microsatellite marqueur génétique polymorphisme génétique parasite génétique des populations maladie transmissible par tiques chevreuil oiseau http://aims.fao.org/aos/agrovoc/c_30962 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_24031 http://aims.fao.org/aos/agrovoc/c_5574 http://aims.fao.org/aos/agrovoc/c_34326 http://aims.fao.org/aos/agrovoc/c_24908 http://aims.fao.org/aos/agrovoc/c_24107 http://aims.fao.org/aos/agrovoc/c_935 France http://aims.fao.org/aos/agrovoc/c_3081 Nine microsatellite markers were isolated from unfed larvae of Ixodes ricinus and were tested on two populations of nymphs collected on roe deer (N=21) and birds (N=39) in a French suburban forest. All markers were polymorphic, with limited evidence for deviations from linkage equilibrium. In accordance with previous markers developed for this species, we found large heterozygote deficits for six of the nine loci. Deficits were of the same order of magnitude within a tick infrapopulation, suggesting that population-level estimates were not due to a Wahlund effect among individual hosts, but more likely to technical problems (i.e., null alleles due to mutations in the flanking regions of the microsatellites). Although micro-geographic substructure (e.g., homogamy within infrapopulations) can not be ruled out, it is possible that null alleles could be an inherent problem associated with this tick species and specific genome-level studies are called for. Despite the possible presence of null alleles, the precision of population genetic estimates was improved by the addition of the newly-developed markers making them a useful addition for studying the population ecology of I. ricinus. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/565867/1/document_565867.pdf application/pdf Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1051/acarologia/20122041 10.1051/acarologia/20122041 info:eu-repo/semantics/altIdentifier/doi/10.1051/acarologia/20122041 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1051/acarologia/20122041
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic L72 - Organismes nuisibles des animaux
L73 - Maladies des animaux
Ixodes ricinus
microsatellite
marqueur génétique
polymorphisme génétique
parasite
génétique des populations
maladie transmissible par tiques
chevreuil
oiseau
http://aims.fao.org/aos/agrovoc/c_30962
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_5574
http://aims.fao.org/aos/agrovoc/c_34326
http://aims.fao.org/aos/agrovoc/c_24908
http://aims.fao.org/aos/agrovoc/c_24107
http://aims.fao.org/aos/agrovoc/c_935
http://aims.fao.org/aos/agrovoc/c_3081
L72 - Organismes nuisibles des animaux
L73 - Maladies des animaux
Ixodes ricinus
microsatellite
marqueur génétique
polymorphisme génétique
parasite
génétique des populations
maladie transmissible par tiques
chevreuil
oiseau
http://aims.fao.org/aos/agrovoc/c_30962
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_5574
http://aims.fao.org/aos/agrovoc/c_34326
http://aims.fao.org/aos/agrovoc/c_24908
http://aims.fao.org/aos/agrovoc/c_24107
http://aims.fao.org/aos/agrovoc/c_935
http://aims.fao.org/aos/agrovoc/c_3081
spellingShingle L72 - Organismes nuisibles des animaux
L73 - Maladies des animaux
Ixodes ricinus
microsatellite
marqueur génétique
polymorphisme génétique
parasite
génétique des populations
maladie transmissible par tiques
chevreuil
oiseau
http://aims.fao.org/aos/agrovoc/c_30962
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_5574
http://aims.fao.org/aos/agrovoc/c_34326
http://aims.fao.org/aos/agrovoc/c_24908
http://aims.fao.org/aos/agrovoc/c_24107
http://aims.fao.org/aos/agrovoc/c_935
http://aims.fao.org/aos/agrovoc/c_3081
L72 - Organismes nuisibles des animaux
L73 - Maladies des animaux
Ixodes ricinus
microsatellite
marqueur génétique
polymorphisme génétique
parasite
génétique des populations
maladie transmissible par tiques
chevreuil
oiseau
http://aims.fao.org/aos/agrovoc/c_30962
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_5574
http://aims.fao.org/aos/agrovoc/c_34326
http://aims.fao.org/aos/agrovoc/c_24908
http://aims.fao.org/aos/agrovoc/c_24107
http://aims.fao.org/aos/agrovoc/c_935
http://aims.fao.org/aos/agrovoc/c_3081
Noel, Valérie
Leger, Elsa
Gómez-Díaz, Elena
Risterucci, Ange-Marie
McCoy, Karen D.
Isolation and characterization of new polymorphic microsatellite markers for the tick Ixodes ricinus (Acari, Ixodidae)
description Nine microsatellite markers were isolated from unfed larvae of Ixodes ricinus and were tested on two populations of nymphs collected on roe deer (N=21) and birds (N=39) in a French suburban forest. All markers were polymorphic, with limited evidence for deviations from linkage equilibrium. In accordance with previous markers developed for this species, we found large heterozygote deficits for six of the nine loci. Deficits were of the same order of magnitude within a tick infrapopulation, suggesting that population-level estimates were not due to a Wahlund effect among individual hosts, but more likely to technical problems (i.e., null alleles due to mutations in the flanking regions of the microsatellites). Although micro-geographic substructure (e.g., homogamy within infrapopulations) can not be ruled out, it is possible that null alleles could be an inherent problem associated with this tick species and specific genome-level studies are called for. Despite the possible presence of null alleles, the precision of population genetic estimates was improved by the addition of the newly-developed markers making them a useful addition for studying the population ecology of I. ricinus.
format article
topic_facet L72 - Organismes nuisibles des animaux
L73 - Maladies des animaux
Ixodes ricinus
microsatellite
marqueur génétique
polymorphisme génétique
parasite
génétique des populations
maladie transmissible par tiques
chevreuil
oiseau
http://aims.fao.org/aos/agrovoc/c_30962
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_5574
http://aims.fao.org/aos/agrovoc/c_34326
http://aims.fao.org/aos/agrovoc/c_24908
http://aims.fao.org/aos/agrovoc/c_24107
http://aims.fao.org/aos/agrovoc/c_935
http://aims.fao.org/aos/agrovoc/c_3081
author Noel, Valérie
Leger, Elsa
Gómez-Díaz, Elena
Risterucci, Ange-Marie
McCoy, Karen D.
author_facet Noel, Valérie
Leger, Elsa
Gómez-Díaz, Elena
Risterucci, Ange-Marie
McCoy, Karen D.
author_sort Noel, Valérie
title Isolation and characterization of new polymorphic microsatellite markers for the tick Ixodes ricinus (Acari, Ixodidae)
title_short Isolation and characterization of new polymorphic microsatellite markers for the tick Ixodes ricinus (Acari, Ixodidae)
title_full Isolation and characterization of new polymorphic microsatellite markers for the tick Ixodes ricinus (Acari, Ixodidae)
title_fullStr Isolation and characterization of new polymorphic microsatellite markers for the tick Ixodes ricinus (Acari, Ixodidae)
title_full_unstemmed Isolation and characterization of new polymorphic microsatellite markers for the tick Ixodes ricinus (Acari, Ixodidae)
title_sort isolation and characterization of new polymorphic microsatellite markers for the tick ixodes ricinus (acari, ixodidae)
url http://agritrop.cirad.fr/565867/
http://agritrop.cirad.fr/565867/1/document_565867.pdf
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