How does SCYLV genetic diversity impact on Sugarcane disease resistance and breeding?

To date, six distinct genotypes of the Sugarcane yellow leaf virus have been described in the literature (BRA, CUB, CHN1, IND, PER and REU). However, little information is available regarding the impact of virus genetic diversity on disease resistance. Three SCYLV genetic groups that can be identified with specific primers by RT-PCR are present in Guadeloupe: BRA-PER, CUB and REU. The impact of the virus genotype diversity on rating for resistance to yellow leaf was studied on a sub-population of 40 sugarcane clones issued from a population of 200 clones planted in a complete three blocks design. The sub-population was screened for virus incidence by sampling 10 leaves per plot and detecting SCYLV by tissue blot immunoassay (TBIA). For each plot, SCYLV genotypes were diagnosed by RT-PCR in a bulk of the TBIA positive leaves. The experiment was repeated in a second crop cycle. The results gave an estimation of genotype incidences for each clone. Of the 185 samples used for SCYLV genotyping, BRA-PER was found in 105, CUB in 170 and REU in 99 samples. CUB was the most frequent genotype encountered and had the largest cultivar host range, overlapping cultivar host ranges of BRA-PER and REU. Additionally, CUB incidence gave the best correlation with SCYLV incidence in each cultivar (R² 0.87). In addition, the incidences of virus genotypes in each cultivar compared by regression analysis showed that the incidence of CUB was correlated to the incidence of REU (R² 0.46), whereas the correlations between the incidence of BRA-PER and the two other genotype incidences were low (R² of 0.12 and 0.14). In view of these results, it is suspected that plant resistance mechanisms for yellow leaf disease depend on the genotype involved and that, in Guadeloupe, we are mainly looking for resistance to CUB genotype as its incidence overlaps with the two other ones, masking resistance to REU and BRA-PER. (Texte intégral)

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Main Authors: Daugrois, Jean-Heinrich, Débibakas, Sarah
Format: conference_item biblioteca
Language:eng
Published: s.n.
Subjects:H20 - Maladies des plantes, F30 - Génétique et amélioration des plantes, virus des végétaux, Saccharum officinarum, http://aims.fao.org/aos/agrovoc/c_5985, http://aims.fao.org/aos/agrovoc/c_6727,
Online Access:http://agritrop.cirad.fr/564268/
http://agritrop.cirad.fr/564268/1/document_564268.pdf
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spelling dig-cirad-fr-5642682024-01-28T20:28:03Z http://agritrop.cirad.fr/564268/ http://agritrop.cirad.fr/564268/ How does SCYLV genetic diversity impact on Sugarcane disease resistance and breeding? Daugrois Jean-Heinrich, Débibakas Sarah. 2012. In : 10th Pathology Workshop. Understanding Sugar cane diseases for their efficient management, Nanning, China, 07-11 May 2012. s.l. : s.n., Résumé, 35. ISSCT Pathology Workshop. 10, Nanning, Chine, 7 Mai 2012/11 Mai 2012. How does SCYLV genetic diversity impact on Sugarcane disease resistance and breeding? Daugrois, Jean-Heinrich Débibakas, Sarah eng 2012 s.n. 10th Pathology Workshop. Understanding Sugar cane diseases for their efficient management, Nanning, China, 07-11 May 2012 H20 - Maladies des plantes F30 - Génétique et amélioration des plantes virus des végétaux Saccharum officinarum http://aims.fao.org/aos/agrovoc/c_5985 http://aims.fao.org/aos/agrovoc/c_6727 To date, six distinct genotypes of the Sugarcane yellow leaf virus have been described in the literature (BRA, CUB, CHN1, IND, PER and REU). However, little information is available regarding the impact of virus genetic diversity on disease resistance. Three SCYLV genetic groups that can be identified with specific primers by RT-PCR are present in Guadeloupe: BRA-PER, CUB and REU. The impact of the virus genotype diversity on rating for resistance to yellow leaf was studied on a sub-population of 40 sugarcane clones issued from a population of 200 clones planted in a complete three blocks design. The sub-population was screened for virus incidence by sampling 10 leaves per plot and detecting SCYLV by tissue blot immunoassay (TBIA). For each plot, SCYLV genotypes were diagnosed by RT-PCR in a bulk of the TBIA positive leaves. The experiment was repeated in a second crop cycle. The results gave an estimation of genotype incidences for each clone. Of the 185 samples used for SCYLV genotyping, BRA-PER was found in 105, CUB in 170 and REU in 99 samples. CUB was the most frequent genotype encountered and had the largest cultivar host range, overlapping cultivar host ranges of BRA-PER and REU. Additionally, CUB incidence gave the best correlation with SCYLV incidence in each cultivar (R² 0.87). In addition, the incidences of virus genotypes in each cultivar compared by regression analysis showed that the incidence of CUB was correlated to the incidence of REU (R² 0.46), whereas the correlations between the incidence of BRA-PER and the two other genotype incidences were low (R² of 0.12 and 0.14). In view of these results, it is suspected that plant resistance mechanisms for yellow leaf disease depend on the genotype involved and that, in Guadeloupe, we are mainly looking for resistance to CUB genotype as its incidence overlaps with the two other ones, masking resistance to REU and BRA-PER. (Texte intégral) conference_item info:eu-repo/semantics/conferenceObject Conference info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/564268/1/document_564268.pdf application/pdf Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic H20 - Maladies des plantes
F30 - Génétique et amélioration des plantes
virus des végétaux
Saccharum officinarum
http://aims.fao.org/aos/agrovoc/c_5985
http://aims.fao.org/aos/agrovoc/c_6727
H20 - Maladies des plantes
F30 - Génétique et amélioration des plantes
virus des végétaux
Saccharum officinarum
http://aims.fao.org/aos/agrovoc/c_5985
http://aims.fao.org/aos/agrovoc/c_6727
spellingShingle H20 - Maladies des plantes
F30 - Génétique et amélioration des plantes
virus des végétaux
Saccharum officinarum
http://aims.fao.org/aos/agrovoc/c_5985
http://aims.fao.org/aos/agrovoc/c_6727
H20 - Maladies des plantes
F30 - Génétique et amélioration des plantes
virus des végétaux
Saccharum officinarum
http://aims.fao.org/aos/agrovoc/c_5985
http://aims.fao.org/aos/agrovoc/c_6727
Daugrois, Jean-Heinrich
Débibakas, Sarah
How does SCYLV genetic diversity impact on Sugarcane disease resistance and breeding?
description To date, six distinct genotypes of the Sugarcane yellow leaf virus have been described in the literature (BRA, CUB, CHN1, IND, PER and REU). However, little information is available regarding the impact of virus genetic diversity on disease resistance. Three SCYLV genetic groups that can be identified with specific primers by RT-PCR are present in Guadeloupe: BRA-PER, CUB and REU. The impact of the virus genotype diversity on rating for resistance to yellow leaf was studied on a sub-population of 40 sugarcane clones issued from a population of 200 clones planted in a complete three blocks design. The sub-population was screened for virus incidence by sampling 10 leaves per plot and detecting SCYLV by tissue blot immunoassay (TBIA). For each plot, SCYLV genotypes were diagnosed by RT-PCR in a bulk of the TBIA positive leaves. The experiment was repeated in a second crop cycle. The results gave an estimation of genotype incidences for each clone. Of the 185 samples used for SCYLV genotyping, BRA-PER was found in 105, CUB in 170 and REU in 99 samples. CUB was the most frequent genotype encountered and had the largest cultivar host range, overlapping cultivar host ranges of BRA-PER and REU. Additionally, CUB incidence gave the best correlation with SCYLV incidence in each cultivar (R² 0.87). In addition, the incidences of virus genotypes in each cultivar compared by regression analysis showed that the incidence of CUB was correlated to the incidence of REU (R² 0.46), whereas the correlations between the incidence of BRA-PER and the two other genotype incidences were low (R² of 0.12 and 0.14). In view of these results, it is suspected that plant resistance mechanisms for yellow leaf disease depend on the genotype involved and that, in Guadeloupe, we are mainly looking for resistance to CUB genotype as its incidence overlaps with the two other ones, masking resistance to REU and BRA-PER. (Texte intégral)
format conference_item
topic_facet H20 - Maladies des plantes
F30 - Génétique et amélioration des plantes
virus des végétaux
Saccharum officinarum
http://aims.fao.org/aos/agrovoc/c_5985
http://aims.fao.org/aos/agrovoc/c_6727
author Daugrois, Jean-Heinrich
Débibakas, Sarah
author_facet Daugrois, Jean-Heinrich
Débibakas, Sarah
author_sort Daugrois, Jean-Heinrich
title How does SCYLV genetic diversity impact on Sugarcane disease resistance and breeding?
title_short How does SCYLV genetic diversity impact on Sugarcane disease resistance and breeding?
title_full How does SCYLV genetic diversity impact on Sugarcane disease resistance and breeding?
title_fullStr How does SCYLV genetic diversity impact on Sugarcane disease resistance and breeding?
title_full_unstemmed How does SCYLV genetic diversity impact on Sugarcane disease resistance and breeding?
title_sort how does scylv genetic diversity impact on sugarcane disease resistance and breeding?
publisher s.n.
url http://agritrop.cirad.fr/564268/
http://agritrop.cirad.fr/564268/1/document_564268.pdf
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